RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CCDC192P0DO97 292 aa15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 ECM2O94769 699 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 LMBR1LQ6UX01 489 aa15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 CCDC83Q8IWF9 413 aa15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 RNF41Q9H4P4 317 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 SMARCC1Q92922 1105 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 TRPM2O94759 1503 aa15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 TTF1Q15361 905 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 TBC1D2Q9BYX2 928 aa15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 NAPBQ9H115 298 aa15.24■□□□□ 0.03
PTPRN2-203ENST00000389418 IL2RBP14784 551 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 ODF2Q5BJF6 829 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 CRACR2BQ8N4Y2 399 aaPredicted RBP15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 PDILTQ8N807 584 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 FLT4P35916 1363 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 CCDC173Q0VFZ6 552 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 WDR78Q5VTH9 848 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 BMP2KLQ5H9B9 411 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 SIRT1Q96EB6 747 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 PHAXQ9H814 394 aaKnown RBP15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 MKNK2Q9HBH9 465 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 ECHDC1Q9NTX5 307 aa15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTPRN2-203ENST00000389418 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
PTPRN2-203ENST00000389418 CEP131Q9UPN4 1083 aa15.22■□□□□ 0.03
PTPRN2-203ENST00000389418 LDHCP07864 332 aa15.22■□□□□ 0.03
PTPRN2-203ENST00000389418 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
PTPRN2-203ENST00000389418 TBC1D9Q6ZT07 1266 aa15.22■□□□□ 0.03
PTPRN2-203ENST00000389418 C16orf71Q8IYS4 520 aaPredicted RBP15.22■□□□□ 0.03
PTPRN2-203ENST00000389418 EVI5LQ96CN4 794 aa15.22■□□□□ 0.03
PTPRN2-203ENST00000389418 NAP1L1P55209 391 aaKnown RBP15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 ARGLU1Q9NWB6 273 aaPredicted RBP15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 RDXP35241 583 aaKnown RBP15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 CCT2P78371 535 aaKnown RBP15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 ZFYVE9O95405 1425 aa15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 HOXC9P31274 260 aa15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 MNS1Q8NEH6 495 aa15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 TNMDQ9H2S6 317 aa15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 LUC7LQ9NQ29 371 aaKnown RBP15.21■□□□□ 0.03
PTPRN2-203ENST00000389418 NPATQ14207 1427 aa15.21■□□□□ 0.02
PTPRN2-203ENST00000389418 ALDH1L1O75891 902 aa15.21■□□□□ 0.02
PTPRN2-203ENST00000389418 RLBP1P12271 317 aa15.21■□□□□ 0.02
PTPRN2-203ENST00000389418 CDR1P51861 262 aa15.21■□□□□ 0.02
PTPRN2-203ENST00000389418 FAM98CQ17RN3 349 aaKnown RBP15.21■□□□□ 0.02
PTPRN2-203ENST00000389418 ACBD3Q9H3P7 528 aa15.21■□□□□ 0.02
PTPRN2-203ENST00000389418 TFCP2L1Q9NZI6 479 aa15.21■□□□□ 0.02
PTPRN2-203ENST00000389418 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
PTPRN2-203ENST00000389418 TXLNBQ8N3L3 684 aa15.2■□□□□ 0.02
PTPRN2-203ENST00000389418 GRPEL1Q9HAV7 217 aa15.2■□□□□ 0.02
PTPRN2-203ENST00000389418 ARHGEF5Q12774 1597 aa15.2■□□□□ 0.02
PTPRN2-203ENST00000389418 IQCA1Q86XH1 822 aa15.2■□□□□ 0.02
PTPRN2-203ENST00000389418 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
PTPRN2-203ENST00000389418 LGR6Q9HBX8 967 aa15.2■□□□□ 0.02
PTPRN2-203ENST00000389418 SMC2O95347 1197 aa15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 ZNHIT6Q9NWK9 470 aaKnown RBP15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 YEATS2Q9ULM3 1422 aa15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 TTLL12Q14166 644 aaPredicted RBP15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 LRRC2Q9BYS8 371 aa15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 HMGN5P82970 282 aaKnown RBP15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 GRM1Q13255 1194 aa15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 UHRF1BP1Q6BDS2 1440 aa15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 HDAC1Q13547 482 aaPredicted RBP15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
PTPRN2-203ENST00000389418 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
PTPRN2-203ENST00000389418 UQCRFS1P1P0C7P4 283 aa15.18■□□□□ 0.02
PTPRN2-203ENST00000389418 SPTY2D1Q68D10 685 aaPredicted RBP15.18■□□□□ 0.02
PTPRN2-203ENST00000389418 G2E3Q7L622 706 aa15.18■□□□□ 0.02
PTPRN2-203ENST00000389418 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
PTPRN2-203ENST00000389418 SETDB2Q96T68 719 aa15.18■□□□□ 0.02
PTPRN2-203ENST00000389418 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 VAT1LQ9HCJ6 419 aa15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 DZIP3Q86Y13 1208 aaKnown RBP15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 ZNF213O14771 459 aa15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 SYCP1Q15431 976 aa15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 CBFA2T2O43439 604 aa15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 SEC63Q9UGP8 760 aaKnown RBP15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 NSFL1CQ9UNZ2 370 aaKnown RBP15.17■□□□□ 0.02
PTPRN2-203ENST00000389418 ZFYVE27Q5T4F4 411 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 GDPD2Q9HCC8 539 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 ZFYVE16Q7Z3T8 1539 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 WDHD1O75717 1129 aaPredicted RBP15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 CEP57L1Q8IYX8 460 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 MRPL50Q8N5N7 158 aaKnown RBP15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 KLHDC4Q8TBB5 520 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms