RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 ANKRD12Q6UB98 2062 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.34□□□□□ -0.59
VLDLR-203ENST00000382100 ELP1O95163 1332 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 VAV2P52735 878 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 SNX16P57768 344 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 TOP1P11387 765 aaKnown RBP11.34□□□□□ -0.59
VLDLR-203ENST00000382100 KIAA0753Q2KHM9 967 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 MAP7D1Q3KQU3 841 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 GPR161Q8N6U8 529 aaKnown RBP11.33□□□□□ -0.6
VLDLR-203ENST00000382100 DRC3Q9H069 523 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 GNAI2P04899 355 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.6
VLDLR-203ENST00000382100 MTRF1LQ9UGC7 380 aaKnown RBP11.33□□□□□ -0.6
VLDLR-203ENST00000382100 ATP11AP98196 1134 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 AMOTQ4VCS5 1084 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 PPP1R14CQ8TAE6 165 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 STMN2Q93045 179 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 GFM2Q969S9 779 aaKnown RBP11.33□□□□□ -0.6
VLDLR-203ENST00000382100 NSD2O96028 1365 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 A0A087WZG4 1122 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 SLC8A1P32418 973 aa11.33□□□□□ -0.6
VLDLR-203ENST00000382100 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
VLDLR-203ENST00000382100 CLCN1P35523 988 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 KRT83P78385 493 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 ZMYM3Q14202 1370 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 A0A1B0GUL7 405 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 CCDC65Q8IXS2 484 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 BLOC1S2Q6QNY1 142 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.32□□□□□ -0.6
VLDLR-203ENST00000382100 SSBP05455 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
VLDLR-203ENST00000382100 NEK4P51957 841 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 TRIML1Q8N9V2 468 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 GPRASP1Q5JY77 1395 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 MCM4P33991 863 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 CYLC1P35663 651 aaPredicted RBP11.32□□□□□ -0.6
VLDLR-203ENST00000382100 LARP1Q6PKG0 1096 aaKnown RBP11.32□□□□□ -0.6
VLDLR-203ENST00000382100 MTUS1Q9ULD2 1270 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 B4DLN1 442 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 MRPL12P52815 198 aaKnown RBP11.32□□□□□ -0.6
VLDLR-203ENST00000382100 GBP7Q8N8V2 638 aaPredicted RBP11.32□□□□□ -0.6
VLDLR-203ENST00000382100 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 HVCN1Q96D96 273 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 HECW1Q76N89 1606 aa11.32□□□□□ -0.6
VLDLR-203ENST00000382100 KRT86O43790 486 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 BCCIPQ9P287 314 aaKnown RBP eCLIP11.31□□□□□ -0.6
VLDLR-203ENST00000382100 LARP1BQ659C4 914 aaKnown RBP11.31□□□□□ -0.6
VLDLR-203ENST00000382100 KCNG1Q9UIX4 513 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 SRGAP1Q7Z6B7 1085 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 ERMNQ8TAM6 284 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 A0A1B0GW55 424 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 DUX4L2P0CJ85 424 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 DUX4L3P0CJ86 424 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 DUX4L4P0CJ87 422 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 DUX4L5P0CJ88 424 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 DUX4L6P0CJ89 424 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 DUX4L7P0CJ90 424 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 DUX4Q9UBX2 424 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 TRIM14Q14142 442 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 HOMEZQ8IX15 550 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
VLDLR-203ENST00000382100 PFDN4Q9NQP4 134 aa11.31□□□□□ -0.6
VLDLR-203ENST00000382100 SNW1Q13573 536 aaKnown RBP11.31□□□□□ -0.6
VLDLR-203ENST00000382100 MCM6Q14566 821 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 TTC31Q49AM3 519 aaPredicted RBP11.3□□□□□ -0.6
VLDLR-203ENST00000382100 PRPF31Q8WWY3 499 aaKnown RBP11.3□□□□□ -0.6
VLDLR-203ENST00000382100 PPP1R9BQ96SB3 815 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 EHBP1L1Q8N3D4 1523 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 RNF8O76064 485 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 SKILP12757 684 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 CIB2O75838 187 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 CERS3Q8IU89 383 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 NUF2Q9BZD4 464 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 RUFY4Q6ZNE9 571 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 SMAP1Q8IYB5 467 aaPredicted RBP11.3□□□□□ -0.6
VLDLR-203ENST00000382100 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 KLHL40Q2TBA0 621 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 TPCN1Q9ULQ1 816 aa11.3□□□□□ -0.6
VLDLR-203ENST00000382100 PHLDB3Q6NSJ2 640 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 SEPT10Q9P0V9 454 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
VLDLR-203ENST00000382100 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 TSC1Q92574 1164 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 UBE2HP62256 183 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 CWC25Q9NXE8 425 aaPredicted RBP11.29□□□□□ -0.6
VLDLR-203ENST00000382100 CTNNA2P26232 953 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
VLDLR-203ENST00000382100 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 GLT8D2Q9H1C3 349 aa11.29□□□□□ -0.6
VLDLR-203ENST00000382100 GFAPP14136 432 aa11.28□□□□□ -0.6
VLDLR-203ENST00000382100 RNASELQ05823 741 aaKnown RBP11.28□□□□□ -0.6
VLDLR-203ENST00000382100 TBC1D5Q92609 795 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms