RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 N4BP2Q86UW6 1770 aaPredicted RBP15.55■□□□□ 0.08
CIITA-202ENST00000381835 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
CIITA-202ENST00000381835 ANKRD13DQ6ZTN6 518 aa15.55■□□□□ 0.08
CIITA-202ENST00000381835 RXRBP28702 533 aa15.54■□□□□ 0.08
CIITA-202ENST00000381835 BEND3Q5T5X7 828 aa15.54■□□□□ 0.08
CIITA-202ENST00000381835 NFKBIBQ15653 356 aa15.54■□□□□ 0.08
CIITA-202ENST00000381835 C8orf34Q49A92 452 aa15.54■□□□□ 0.08
CIITA-202ENST00000381835 TTLL7Q6ZT98 887 aa15.53■□□□□ 0.08
CIITA-202ENST00000381835 RGS17Q9UGC6 210 aaPredicted RBP15.53■□□□□ 0.08
CIITA-202ENST00000381835 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
CIITA-202ENST00000381835 RGS3P49796 1198 aa15.52■□□□□ 0.07
CIITA-202ENST00000381835 ITPK1Q13572 414 aa15.52■□□□□ 0.07
CIITA-202ENST00000381835 CWF19L2Q2TBE0 894 aaKnown RBP15.52■□□□□ 0.07
CIITA-202ENST00000381835 ARXQ96QS3 562 aa15.52■□□□□ 0.07
CIITA-202ENST00000381835 ZBTB1Q9Y2K1 713 aa15.52■□□□□ 0.07
CIITA-202ENST00000381835 KCNQ4P56696 695 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 GSE1Q14687 1217 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 FAM196AQ6ZSG2 479 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 USP44Q9H0E7 712 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 ATP10DQ9P241 1426 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 NEXNQ0ZGT2 675 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 PLBD2Q8NHP8 589 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 MYD88Q99836 296 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 ARFGEF2Q9Y6D5 1785 aa15.51■□□□□ 0.07
CIITA-202ENST00000381835 GNAI3P08754 354 aa15.5■□□□□ 0.07
CIITA-202ENST00000381835 POTEAQ6S8J7 498 aa15.5■□□□□ 0.07
CIITA-202ENST00000381835 LINS1Q8NG48 757 aa15.5■□□□□ 0.07
CIITA-202ENST00000381835 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
CIITA-202ENST00000381835 ZBTB3Q9H5J0 574 aa15.5■□□□□ 0.07
CIITA-202ENST00000381835 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
CIITA-202ENST00000381835 CRKLP46109 303 aaKnown RBP15.5■□□□□ 0.07
CIITA-202ENST00000381835 MYH14Q7Z406 1995 aaKnown RBP15.5■□□□□ 0.07
CIITA-202ENST00000381835 UBTFL1P0CB47 393 aaPredicted RBP15.49■□□□□ 0.07
CIITA-202ENST00000381835 BCL11BQ9C0K0 894 aaPredicted RBP15.49■□□□□ 0.07
CIITA-202ENST00000381835 ALDH1L1O75891 902 aa15.49■□□□□ 0.07
CIITA-202ENST00000381835 TRIM37O94972 964 aa15.49■□□□□ 0.07
CIITA-202ENST00000381835 GNAI2P04899 355 aa15.49■□□□□ 0.07
CIITA-202ENST00000381835 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
CIITA-202ENST00000381835 HDAC1Q13547 482 aaPredicted RBP15.49■□□□□ 0.07
CIITA-202ENST00000381835 CCDC87Q9NVE4 849 aa15.49■□□□□ 0.07
CIITA-202ENST00000381835 NBPF7P0C2Y1 421 aaPredicted RBP15.48■□□□□ 0.07
CIITA-202ENST00000381835 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
CIITA-202ENST00000381835 C9orf78Q9NZ63 289 aaPredicted RBP15.48■□□□□ 0.07
CIITA-202ENST00000381835 AFDNP55196 1824 aaKnown RBP15.48■□□□□ 0.07
CIITA-202ENST00000381835 ATP5J2-PTCD1G3V325 749 aa15.48■□□□□ 0.07
CIITA-202ENST00000381835 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
CIITA-202ENST00000381835 KIF6Q6ZMV9 814 aa15.48■□□□□ 0.07
CIITA-202ENST00000381835 LRRFIP2Q9Y608 721 aaKnown RBP15.48■□□□□ 0.07
CIITA-202ENST00000381835 NUP188Q5SRE5 1749 aa15.47■□□□□ 0.07
CIITA-202ENST00000381835 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
CIITA-202ENST00000381835 IL6STP40189 918 aaPredicted RBP15.47■□□□□ 0.07
CIITA-202ENST00000381835 CEP85Q6P2H3 762 aa15.47■□□□□ 0.07
CIITA-202ENST00000381835 LINC00116Q8NCU8 138 aa15.46■□□□□ 0.07
CIITA-202ENST00000381835 CCNL1Q9UK58 526 aaPredicted RBP15.46■□□□□ 0.07
CIITA-202ENST00000381835 CICQ96RK0 1608 aaPredicted RBP15.46■□□□□ 0.07
CIITA-202ENST00000381835 COL5A3P25940 1745 aaPredicted RBP15.46■□□□□ 0.07
CIITA-202ENST00000381835 RPAP2Q8IXW5 612 aaPredicted RBP15.46■□□□□ 0.07
CIITA-202ENST00000381835 ANKRD44Q8N8A2 993 aa15.46■□□□□ 0.07
CIITA-202ENST00000381835 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.07
CIITA-202ENST00000381835 LY75O60449 1722 aa15.45■□□□□ 0.06
CIITA-202ENST00000381835 GRM8O00222 908 aa15.45■□□□□ 0.06
CIITA-202ENST00000381835 GCKRQ14397 625 aa15.45■□□□□ 0.06
CIITA-202ENST00000381835 TBC1D2BQ9UPU7 963 aa15.45■□□□□ 0.06
CIITA-202ENST00000381835 EIF5P55010 431 aaKnown RBP15.44■□□□□ 0.06
CIITA-202ENST00000381835 DZIP3Q86Y13 1208 aaKnown RBP15.44■□□□□ 0.06
CIITA-202ENST00000381835 MAP3K15Q6ZN16 1313 aa15.44■□□□□ 0.06
CIITA-202ENST00000381835 RREB1Q92766 1687 aa15.43■□□□□ 0.06
CIITA-202ENST00000381835 HLFQ16534 295 aa15.43■□□□□ 0.06
CIITA-202ENST00000381835 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
CIITA-202ENST00000381835 SMC5Q8IY18 1101 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 TAF1LQ8IZX4 1826 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 NUP98P52948 1817 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 A0A087WZG4 1122 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 PNMA6EA0A0J9YXQ4 647 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 HMMRO75330 724 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 TCIRG1Q13488 830 aa15.42■□□□□ 0.06
CIITA-202ENST00000381835 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
CIITA-202ENST00000381835 ANO8Q9HCE9 1232 aaPredicted RBP15.42■□□□□ 0.06
CIITA-202ENST00000381835 ATP8B2P98198 1209 aa15.41■□□□□ 0.06
CIITA-202ENST00000381835 CWC25Q9NXE8 425 aaPredicted RBP15.41■□□□□ 0.06
CIITA-202ENST00000381835 BRPF3Q9ULD4 1205 aa15.41■□□□□ 0.06
CIITA-202ENST00000381835 CNTNAP4Q9C0A0 1308 aa15.41■□□□□ 0.06
CIITA-202ENST00000381835 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 LRRC4BQ9NT99 713 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 UTYO14607 1347 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 COL15A1P39059 1388 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 FRAT2O75474 233 aaPredicted RBP15.4■□□□□ 0.06
CIITA-202ENST00000381835 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 CCDC191Q8NCU4 936 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 SUCLG2Q96I99 432 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
CIITA-202ENST00000381835 GPTP24298 496 aa15.39■□□□□ 0.05
CIITA-202ENST00000381835 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
CIITA-202ENST00000381835 ISCA1Q9BUE6 129 aa15.39■□□□□ 0.05
CIITA-202ENST00000381835 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
CIITA-202ENST00000381835 GNPATO15228 680 aa15.39■□□□□ 0.05
CIITA-202ENST00000381835 UBE2Q2Q8WVN8 375 aa15.39■□□□□ 0.05
CIITA-202ENST00000381835 DCTPP1Q9H773 170 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms