RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
SYNGR1-204ENST00000381535 SLC4A9Q96Q91 983 aa18.18■□□□□ 0.5
SYNGR1-204ENST00000381535 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
SYNGR1-204ENST00000381535 KCNQ2O43526 872 aa18.17■□□□□ 0.5
SYNGR1-204ENST00000381535 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
SYNGR1-204ENST00000381535 RGS3P49796 1198 aa18.17■□□□□ 0.5
SYNGR1-204ENST00000381535 NEXNQ0ZGT2 675 aa18.17■□□□□ 0.5
SYNGR1-204ENST00000381535 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
SYNGR1-204ENST00000381535 SMARCC1Q92922 1105 aaPredicted RBP18.17■□□□□ 0.5
SYNGR1-204ENST00000381535 ATP8B2P98198 1209 aa18.16■□□□□ 0.5
SYNGR1-204ENST00000381535 HMMRO75330 724 aa18.15■□□□□ 0.5
SYNGR1-204ENST00000381535 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
SYNGR1-204ENST00000381535 MYD88Q99836 296 aa18.15■□□□□ 0.5
SYNGR1-204ENST00000381535 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
SYNGR1-204ENST00000381535 C9orf78Q9NZ63 289 aaPredicted RBP18.15■□□□□ 0.5
SYNGR1-204ENST00000381535 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
SYNGR1-204ENST00000381535 CWF19L2Q2TBE0 894 aaKnown RBP18.14■□□□□ 0.49
SYNGR1-204ENST00000381535 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.49
SYNGR1-204ENST00000381535 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
SYNGR1-204ENST00000381535 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
SYNGR1-204ENST00000381535 DOT1LQ8TEK3 1739 aa18.13■□□□□ 0.49
SYNGR1-204ENST00000381535 PSDA5PKW4 1024 aaPredicted RBP18.13■□□□□ 0.49
SYNGR1-204ENST00000381535 IGKV5-2P06315 115 aa18.13■□□□□ 0.49
SYNGR1-204ENST00000381535 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
SYNGR1-204ENST00000381535 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
SYNGR1-204ENST00000381535 NUCB1Q02818 461 aa18.13■□□□□ 0.49
SYNGR1-204ENST00000381535 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
SYNGR1-204ENST00000381535 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
SYNGR1-204ENST00000381535 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
SYNGR1-204ENST00000381535 PLSCR1O15162 318 aa18.12■□□□□ 0.49
SYNGR1-204ENST00000381535 SIK1P57059 783 aa18.12■□□□□ 0.49
SYNGR1-204ENST00000381535 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
SYNGR1-204ENST00000381535 CHD1LQ86WJ1 897 aa18.11■□□□□ 0.49
SYNGR1-204ENST00000381535 BCL11BQ9C0K0 894 aaPredicted RBP18.11■□□□□ 0.49
SYNGR1-204ENST00000381535 GRM8O00222 908 aa18.1■□□□□ 0.49
SYNGR1-204ENST00000381535 GCKRQ14397 625 aa18.1■□□□□ 0.49
SYNGR1-204ENST00000381535 ZNF330Q9Y3S2 320 aaPredicted RBP18.1■□□□□ 0.49
SYNGR1-204ENST00000381535 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
SYNGR1-204ENST00000381535 IBTKQ9P2D0 1353 aaPredicted RBP18.09■□□□□ 0.49
SYNGR1-204ENST00000381535 UTYO14607 1347 aa18.09■□□□□ 0.49
SYNGR1-204ENST00000381535 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
SYNGR1-204ENST00000381535 ZBTB3Q9H5J0 574 aa18.09■□□□□ 0.49
SYNGR1-204ENST00000381535 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
SYNGR1-204ENST00000381535 ATP5J2-PTCD1G3V325 749 aa18.08■□□□□ 0.48
SYNGR1-204ENST00000381535 PDE4AP27815 886 aa18.08■□□□□ 0.48
SYNGR1-204ENST00000381535 PTF1AQ7RTS3 328 aa18.08■□□□□ 0.48
SYNGR1-204ENST00000381535 PPP1R42Q7Z4L9 355 aa18.08■□□□□ 0.48
SYNGR1-204ENST00000381535 ARXQ96QS3 562 aa18.08■□□□□ 0.48
SYNGR1-204ENST00000381535 LNPKQ9C0E8 428 aa18.08■□□□□ 0.48
SYNGR1-204ENST00000381535 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.48
SYNGR1-204ENST00000381535 PNMA6EA0A0J9YXQ4 647 aa18.07■□□□□ 0.48
SYNGR1-204ENST00000381535 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
SYNGR1-204ENST00000381535 ITPK1Q13572 414 aa18.07■□□□□ 0.48
SYNGR1-204ENST00000381535 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
SYNGR1-204ENST00000381535 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
SYNGR1-204ENST00000381535 SSH3Q8TE77 659 aa18.07■□□□□ 0.48
SYNGR1-204ENST00000381535 ZBTB1Q9Y2K1 713 aa18.07■□□□□ 0.48
SYNGR1-204ENST00000381535 TNS1Q9HBL0 1735 aaKnown RBP18.06■□□□□ 0.48
SYNGR1-204ENST00000381535 CCDC87Q9NVE4 849 aa18.06■□□□□ 0.48
SYNGR1-204ENST00000381535 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
SYNGR1-204ENST00000381535 TCIRG1Q13488 830 aa18.05■□□□□ 0.48
SYNGR1-204ENST00000381535 POLA2Q14181 598 aa18.05■□□□□ 0.48
SYNGR1-204ENST00000381535 PROM2Q8N271 834 aa18.05■□□□□ 0.48
SYNGR1-204ENST00000381535 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
SYNGR1-204ENST00000381535 CWC25Q9NXE8 425 aaPredicted RBP18.05■□□□□ 0.48
SYNGR1-204ENST00000381535 MAP3K15Q6ZN16 1313 aa18.04■□□□□ 0.48
SYNGR1-204ENST00000381535 A0A087WZG4 1122 aa18.04■□□□□ 0.48
SYNGR1-204ENST00000381535 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
SYNGR1-204ENST00000381535 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
SYNGR1-204ENST00000381535 ISCA1Q9BUE6 129 aa18.04■□□□□ 0.48
SYNGR1-204ENST00000381535 H7C1W4 665 aa18.03■□□□□ 0.48
SYNGR1-204ENST00000381535 EIF5P55010 431 aaKnown RBP18.03■□□□□ 0.48
SYNGR1-204ENST00000381535 MTX1Q13505 466 aa18.03■□□□□ 0.48
SYNGR1-204ENST00000381535 JARID2Q92833 1246 aaPredicted RBP18.03■□□□□ 0.48
SYNGR1-204ENST00000381535 KAZALD1Q96I82 304 aa18.03■□□□□ 0.48
SYNGR1-204ENST00000381535 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
SYNGR1-204ENST00000381535 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
SYNGR1-204ENST00000381535 APBB1O00213 710 aa18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 TRIM28Q13263 835 aaKnown RBP18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 FAM161AQ3B820 660 aa18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 HSP90AB3PQ58FF7 597 aa18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 DZIP3Q86Y13 1208 aaKnown RBP18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.48
SYNGR1-204ENST00000381535 TJP1Q07157 1748 aa18.01■□□□□ 0.47
SYNGR1-204ENST00000381535 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
SYNGR1-204ENST00000381535 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
SYNGR1-204ENST00000381535 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
SYNGR1-204ENST00000381535 HLFQ16534 295 aa18.01■□□□□ 0.47
SYNGR1-204ENST00000381535 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
SYNGR1-204ENST00000381535 RAB11FIP3O75154 756 aa18■□□□□ 0.47
SYNGR1-204ENST00000381535 CASP7P55210 303 aa18■□□□□ 0.47
SYNGR1-204ENST00000381535 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
SYNGR1-204ENST00000381535 LINC00116Q8NCU8 138 aa18■□□□□ 0.47
SYNGR1-204ENST00000381535 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
SYNGR1-204ENST00000381535 EPHA10Q5JZY3 1008 aa17.99■□□□□ 0.47
SYNGR1-204ENST00000381535 C16orf71Q8IYS4 520 aaPredicted RBP17.99■□□□□ 0.47
SYNGR1-204ENST00000381535 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
SYNGR1-204ENST00000381535 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms