RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 NBPF7P0C2Y1 421 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-201ENST00000380701 IL2RBP14784 551 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 DDX12PQ92771 950 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 KRT23Q9C075 422 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 PARP3Q9Y6F1 533 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 GNAT2P19087 354 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 TCP11L1Q9NUJ3 509 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 FLIIQ13045 1269 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 CALML4Q96GE6 196 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 PCF11O94913 1555 aaKnown RBP8.33□□□□□ -1.08
CCDC171-201ENST00000380701 BICRAQ9NZM4 1560 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 EIF5P55010 431 aaKnown RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 SSRP1Q08945 709 aaKnown RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 NUP62CLQ9H1M0 184 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 EIF3JO75822 258 aaKnown RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 GBP3Q9H0R5 595 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 UHRF1BP1Q6BDS2 1440 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 NEFHP12036 1026 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 FAM43AQ8N2R8 423 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 KAT14Q9H8E8 782 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 FBXO31Q5XUX0 539 aaPredicted RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 NKTRP30414 1462 aaKnown RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 FLT4P35916 1363 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 MINDY4BA8MYZ0 360 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 MCM3P25205 808 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 CWC27Q6UX04 472 aaKnown RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 ZNF710Q8N1W2 664 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 ZNF622Q969S3 477 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 UPF3BQ9BZI7 483 aaKnown RBP8.32□□□□□ -1.08
CCDC171-201ENST00000380701 ZFYVE9O95405 1425 aa8.32□□□□□ -1.08
CCDC171-201ENST00000380701 MAST3O60307 1309 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 CALM1P0DP23 149 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 CALM2P0DP24 149 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 CALM3P0DP25 149 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 LMOD1P29536 600 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-201ENST00000380701 CCDC83Q8IWF9 413 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 BCAR3O75815 825 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 IL15P40933 162 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-201ENST00000380701 SUPT20HQ8NEM7 779 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 C8orf76Q96K31 380 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 DRC1Q96MC2 740 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
CCDC171-201ENST00000380701 PARP10Q53GL7 1025 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 TNPO1Q92973 898 aaKnown RBP8.31□□□□□ -1.08
CCDC171-201ENST00000380701 ADGRF5Q8IZF2 1346 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 GOLGA8AA7E2F4 631 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 GOLGA8BA8MQT2 603 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 RANBP6O60518 1105 aaKnown RBP8.31□□□□□ -1.08
CCDC171-201ENST00000380701 DCAF5Q96JK2 942 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 ANO10Q9NW15 660 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 ANKRD62A6NC57 917 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
CCDC171-201ENST00000380701 SPA17Q15506 151 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 ARHGEF10O15013 1369 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 ITSN2Q9NZM3 1697 aa8.31□□□□□ -1.08
CCDC171-201ENST00000380701 WDR78Q5VTH9 848 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 FMNL3Q8IVF7 1028 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 FLAD1Q8NFF5 587 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 UTP14AQ9BVJ6 771 aaKnown RBP8.3□□□□□ -1.08
CCDC171-201ENST00000380701 RPRD2Q5VT52 1461 aaKnown RBP8.3□□□□□ -1.08
CCDC171-201ENST00000380701 MCM10Q7L590 875 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 TRAK2O60296 914 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-201ENST00000380701 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-201ENST00000380701 NLRP5P59047 1200 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 NCBP1Q09161 790 aaKnown RBP8.3□□□□□ -1.08
CCDC171-201ENST00000380701 NCOA7Q8NI08 942 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 MFSD6Q6ZSS7 791 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 IL1RAPL2Q9NP60 686 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 CEBPAP49715 358 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-201ENST00000380701 LMTK3Q96Q04 1460 aa8.3□□□□□ -1.08
CCDC171-201ENST00000380701 PRPF40AO75400 957 aaKnown RBP8.29□□□□□ -1.08
CCDC171-201ENST00000380701 TMEM57Q8N5G2 664 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 ESR2Q92731 530 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 CDCA7LQ96GN5 454 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 RMND1Q9NWS8 449 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 GPATCH8Q9UKJ3 1502 aaKnown RBP8.29□□□□□ -1.08
CCDC171-201ENST00000380701 ZSCAN12O43309 604 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 CCDC91Q7Z6B0 441 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 TSPY2A6NKD2 308 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 GOLIM4O00461 696 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 MAP3K11Q16584 847 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 GLT8D2Q9H1C3 349 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 SHANK2Q9UPX8 1470 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 CCDC112Q8NEF3 446 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 ZC3H12CQ9C0D7 883 aaKnown RBP8.29□□□□□ -1.08
CCDC171-201ENST00000380701 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 NEMFO60524 1076 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 CASTP20810 708 aaKnown RBP8.29□□□□□ -1.08
CCDC171-201ENST00000380701 ATP6V1AP38606 617 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 STK3Q13188 491 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 HOOK3Q86VS8 718 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 RAPGEF6Q8TEU7 1601 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 SPDYE4A6NLX3 237 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms