RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 MNS1Q8NEH6 495 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 KIF1BPQ96EK5 621 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 DACT1Q9NYF0 836 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 PIK3R4Q99570 1358 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 SBNO2Q9Y2G9 1366 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 RTL1A6NKG5 1358 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 LMOD3Q0VAK6 560 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
TRIM6-202ENST00000380097 FERMT3Q86UX7 667 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 LRRC8AQ8IWT6 810 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 AK7Q96M32 723 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 MEIS3Q99687 375 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 DNAJC25Q9H1X3 360 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 RNF216Q9NWF9 866 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-202ENST00000380097 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-202ENST00000380097 TRPM2O94759 1503 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 RPAP1Q9BWH6 1393 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-202ENST00000380097 CTR9Q6PD62 1173 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 SYT10Q6XYQ8 523 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 RAD50Q92878 1312 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 MROH1Q8NDA8 1641 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 DTNBO60941 627 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 AK2P54819 239 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 SNW1Q13573 536 aaKnown RBP8.58□□□□□ -1.04
TRIM6-202ENST00000380097 NGDNQ8NEJ9 315 aaKnown RBP8.58□□□□□ -1.04
TRIM6-202ENST00000380097 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 CCDC69A6NI79 296 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 USP27XA6NNY8 438 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 ZSCAN26Q16670 478 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 LARP1BQ659C4 914 aaKnown RBP8.58□□□□□ -1.04
TRIM6-202ENST00000380097 NME9Q86XW9 330 aa8.58□□□□□ -1.04
TRIM6-202ENST00000380097 DDX19AQ9NUU7 478 aaKnown RBP8.58□□□□□ -1.04
TRIM6-202ENST00000380097 TET3O43151 1660 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 METP08581 1390 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 PNMA6AP0CW24 399 aaPredicted RBP8.57□□□□□ -1.04
TRIM6-202ENST00000380097 LIG1P18858 919 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 PLA2G4DQ86XP0 818 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 CLCN6P51797 869 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 CCDC144BQ3MJ40 725 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 CCDC144CPQ8IYA2 1237 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 KCNG1Q9UIX4 513 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 RICTORQ6R327 1708 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 MYO1CO00159 1063 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 EMILIN1Q9Y6C2 1016 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 IFT172Q9UG01 1749 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 LMTK2Q8IWU2 1503 aa8.57□□□□□ -1.04
TRIM6-202ENST00000380097 KIF24Q5T7B8 1368 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 KCNA6P17658 529 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 CASTP20810 708 aaKnown RBP8.56□□□□□ -1.04
TRIM6-202ENST00000380097 CASQ1P31415 396 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 GNL2Q13823 731 aaKnown RBP8.56□□□□□ -1.04
TRIM6-202ENST00000380097 ARID5BQ14865 1188 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 ZRSR1Q15695 479 aaKnown RBP8.56□□□□□ -1.04
TRIM6-202ENST00000380097 KRT24Q2M2I5 525 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 TDRD7Q8NHU6 1098 aaKnown RBP8.56□□□□□ -1.04
TRIM6-202ENST00000380097 PHACTR3Q96KR7 559 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 ZNF446Q9NWS9 450 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 HSPA4P34932 840 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 LEKR1Q6ZMV7 388 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 ANKLE2Q86XL3 938 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 CCAR2Q8N163 923 aaKnown RBP8.56□□□□□ -1.04
TRIM6-202ENST00000380097 SCAND2PQ9GZW5 306 aaPredicted RBP8.56□□□□□ -1.04
TRIM6-202ENST00000380097 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
TRIM6-202ENST00000380097 PPP6R1Q9UPN7 881 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 MTMR6Q9Y217 621 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 USP16Q9Y5T5 823 aa8.56□□□□□ -1.04
TRIM6-202ENST00000380097 DHX16O60231 1041 aaKnown RBP8.55□□□□□ -1.04
TRIM6-202ENST00000380097 CAVIN2O95810 425 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 LMAN1P49257 510 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 DCTN1Q14203 1278 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 TTC6Q86TZ1 520 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 TOMM22Q9NS69 142 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 FAM53CQ9NYF3 392 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 SPHKAPQ2M3C7 1700 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 KIAA1210Q9ULL0 1709 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
TRIM6-202ENST00000380097 TRIM66O15016 1216 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 MAP4K4O95819 1239 aaPredicted RBP8.55□□□□□ -1.04
TRIM6-202ENST00000380097 PDCP20941 246 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 FAM173BQ6P4H8 233 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 NUDT16Q96DE0 195 aaKnown RBP8.55□□□□□ -1.04
TRIM6-202ENST00000380097 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 ADGRB2O60241 1585 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 FYB1O15117 783 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 SYTL4Q96C24 671 aaPredicted RBP8.55□□□□□ -1.04
TRIM6-202ENST00000380097 ZSCAN31Q96LW9 406 aaPredicted RBP8.55□□□□□ -1.04
TRIM6-202ENST00000380097 YY1AP1Q9H869 796 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 PDRG1Q9NUG6 133 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 FAM135BQ49AJ0 1406 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 KIF13AQ9H1H9 1805 aa8.55□□□□□ -1.04
TRIM6-202ENST00000380097 GNAI2P04899 355 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 PLA2G4AP47712 749 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 MYOM2P54296 1465 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 MUM1L1Q5H9M0 696 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 RUFY3Q7L099 469 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms