RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 CALCOCO1Q9P1Z2 691 aa11.65□□□□□ -0.54
C4orf46-201ENST00000379205 ME1P48163 572 aa11.65□□□□□ -0.54
C4orf46-201ENST00000379205 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
C4orf46-201ENST00000379205 C10orf67Q8IYJ2 551 aa11.65□□□□□ -0.54
C4orf46-201ENST00000379205 IQGAP3Q86VI3 1631 aa11.65□□□□□ -0.54
C4orf46-201ENST00000379205 CCDC73Q6ZRK6 1079 aa11.65□□□□□ -0.54
C4orf46-201ENST00000379205 UBXN4Q92575 508 aa11.65□□□□□ -0.54
C4orf46-201ENST00000379205 ZCCHC17Q9NP64 241 aaKnown RBP11.65□□□□□ -0.54
C4orf46-201ENST00000379205 PA2G4Q9UQ80 394 aaKnown RBP11.65□□□□□ -0.54
C4orf46-201ENST00000379205 CDC42BPBQ9Y5S2 1711 aa11.65□□□□□ -0.55
C4orf46-201ENST00000379205 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.55
C4orf46-201ENST00000379205 SGSM2O43147 1006 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 NRDCO43847 1150 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 AMPHP49418 695 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 ATP8B2P98198 1209 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 FTOQ9C0B1 505 aaKnown RBP eCLIP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 EPC1Q9H2F5 836 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 PLCH2O75038 1416 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 PTCH1Q13635 1447 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 JAK2O60674 1132 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 KINO60870 393 aaKnown RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 SLU7O95391 586 aaKnown RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 FAM69CQ0P6D2 419 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 SNW1Q13573 536 aaKnown RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 TEX35Q5T0J7 233 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 TMC6Q7Z403 805 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 CLASRPQ8N2M8 674 aaKnown RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 AOPEPQ8N6M6 819 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 FSD1Q9BTV5 496 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 DNAI1Q9UI46 699 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 RAD50Q92878 1312 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 CTIFO43310 598 aaKnown RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 GYS2P54840 703 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 C9orf78Q9NZ63 289 aaPredicted RBP11.64□□□□□ -0.55
C4orf46-201ENST00000379205 PTPRCP08575 1304 aa11.64□□□□□ -0.55
C4orf46-201ENST00000379205 RGS12O14924 1447 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 RIMS2Q9UQ26 1411 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
C4orf46-201ENST00000379205 HDGFL1Q5TGJ6 251 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 TPCN1Q9ULQ1 816 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 SHPRHQ149N8 1683 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 EIF4A2Q14240 407 aaKnown RBP11.63□□□□□ -0.55
C4orf46-201ENST00000379205 TAF7Q15545 349 aaPredicted RBP11.63□□□□□ -0.55
C4orf46-201ENST00000379205 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
C4orf46-201ENST00000379205 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
C4orf46-201ENST00000379205 SBNO2Q9Y2G9 1366 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 SEC31AO94979 1220 aaKnown RBP11.63□□□□□ -0.55
C4orf46-201ENST00000379205 CCDC30Q5VVM6 783 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 AACSQ86V21 672 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 HYPKQ9NX55 129 aa11.63□□□□□ -0.55
C4orf46-201ENST00000379205 UNC13BO14795 1591 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 CHL1O00533 1208 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 PDCP20941 246 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 COL9A3Q14050 684 aaPredicted RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 TMCO3Q6UWJ1 677 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 C11orf57Q6ZUT1 292 aaPredicted RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 LRRC8AQ8IWT6 810 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 PDILTQ8N807 584 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 RNF17Q9BXT8 1623 aaKnown RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 SCAND2PQ9GZW5 306 aaPredicted RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 TRPM2O94759 1503 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 BMS1Q14692 1282 aaKnown RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 LEO1Q8WVC0 666 aaPredicted RBP11.62□□□□□ -0.55
C4orf46-201ENST00000379205 NDUFB9Q9Y6M9 179 aa11.62□□□□□ -0.55
C4orf46-201ENST00000379205 TAF7LQ5H9L4 462 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 TTLL5Q6EMB2 1281 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
C4orf46-201ENST00000379205 BRF1Q92994 677 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 DDX19AQ9NUU7 478 aaKnown RBP11.61□□□□□ -0.55
C4orf46-201ENST00000379205 ATP10DQ9P241 1426 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 ZSCAN31Q96LW9 406 aaPredicted RBP11.61□□□□□ -0.55
C4orf46-201ENST00000379205 FUCA2Q9BTY2 467 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 OSBPL3Q9H4L5 887 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 PPP6R1Q9UPN7 881 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 LRRN4CLQ8ND94 238 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 TOMM22Q9NS69 142 aa11.61□□□□□ -0.55
C4orf46-201ENST00000379205 ABCA6Q8N139 1617 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 NBPF7P0C2Y1 421 aaPredicted RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 LMAN1P49257 510 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 GOLGA8FQ08AF8 430 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 GOLGA8DPQ0D2H9 430 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 KIF1BPQ96EK5 621 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 LSG1Q9H089 658 aaKnown RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 GPATCH3Q96I76 525 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 ARGLU1Q9NWB6 273 aaPredicted RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 MORC2Q9Y6X9 1032 aaPredicted RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 MED14O60244 1454 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms