RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 CCDC8Q9H0W5 538 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 DESP17661 470 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 SSBP05455 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 SPTY2D1Q68D10 685 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 PIBF1Q8WXW3 757 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 ERCC6L2Q5T890 1561 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 PI4KAP2A4QPH2 592 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 MINDY4BA8MYZ0 360 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 RPAP2Q8IXW5 612 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-205ENST00000377670 PI4KAP1Q8N8J0 262 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 BAG3O95817 575 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 ALDH1L2Q3SY69 923 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 WDR70Q9NW82 654 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 FIBPO43427 364 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 RXRBP28702 533 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 BMP2KQ9NSY1 1161 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-205ENST00000377670 MTHFSDQ2M296 383 aaKnown RBP12.67□□□□□ -0.38
HIF3A-205ENST00000377670 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
HIF3A-205ENST00000377670 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
HIF3A-205ENST00000377670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.38
HIF3A-205ENST00000377670 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
HIF3A-205ENST00000377670 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
HIF3A-205ENST00000377670 EYA3Q99504 573 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
HIF3A-205ENST00000377670 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
HIF3A-205ENST00000377670 MAP3K2Q9Y2U5 619 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 YEATS2Q9ULM3 1422 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 CCDC191Q8NCU4 936 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 DNAAF4Q8WXU2 420 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
HIF3A-205ENST00000377670 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 NSD2O96028 1365 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 ABCC11Q96J66 1382 aa12.66□□□□□ -0.38
HIF3A-205ENST00000377670 YTHDC2Q9H6S0 1430 aaKnown RBP12.66□□□□□ -0.38
HIF3A-205ENST00000377670 RLBP1P12271 317 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 CCDC112Q8NEF3 446 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 GNPATO15228 680 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 RABEP1Q15276 862 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 ZC3H12CQ9C0D7 883 aaKnown RBP12.65□□□□□ -0.38
HIF3A-205ENST00000377670 TSPYL1Q9H0U9 437 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 ERICH4A6NGS2 130 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 F8W031 263 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-205ENST00000377670 RFX1P22670 979 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 MEIS3Q99687 375 aa12.65□□□□□ -0.38
HIF3A-205ENST00000377670 AXDND1Q5T1B0 1012 aaPredicted RBP12.65□□□□□ -0.39
HIF3A-205ENST00000377670 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.39
HIF3A-205ENST00000377670 GSTO1P78417 241 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
HIF3A-205ENST00000377670 MAGEC2Q9UBF1 373 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-205ENST00000377670 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 SNRPA1P09661 255 aaKnown RBP12.64□□□□□ -0.39
HIF3A-205ENST00000377670 MX1P20591 662 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-205ENST00000377670 CCP110O43303 1012 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 MCM4P33991 863 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 EYA1Q99502 592 aa12.64□□□□□ -0.39
HIF3A-205ENST00000377670 CWC25Q9NXE8 425 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-205ENST00000377670 ABCC1P33527 1531 aa12.63□□□□□ -0.39
HIF3A-205ENST00000377670 MAST1Q9Y2H9 1570 aa12.63□□□□□ -0.39
HIF3A-205ENST00000377670 KINO60870 393 aaKnown RBP12.63□□□□□ -0.39
HIF3A-205ENST00000377670 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
HIF3A-205ENST00000377670 DBF4Q9UBU7 674 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-205ENST00000377670 K7ELQ4 463 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-205ENST00000377670 TNNI2P48788 182 aa12.63□□□□□ -0.39
HIF3A-205ENST00000377670 PLCD4Q9BRC7 762 aa12.63□□□□□ -0.39
HIF3A-205ENST00000377670 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
HIF3A-205ENST00000377670 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 MBD5Q9P267 1494 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 LTKP29376 864 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 CDKL5O76039 1030 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 SIRT1Q96EB6 747 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 NAPBQ9H115 298 aa12.62□□□□□ -0.39
HIF3A-205ENST00000377670 IMMTQ16891 758 aaKnown RBP12.62□□□□□ -0.39
HIF3A-205ENST00000377670 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
HIF3A-205ENST00000377670 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 NPATQ14207 1427 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 CCDC192P0DO97 292 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
HIF3A-205ENST00000377670 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 B4DLN1 442 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 MRPL12P52815 198 aaKnown RBP12.61□□□□□ -0.39
HIF3A-205ENST00000377670 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 UGGT1Q9NYU2 1555 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 TTC21AQ8NDW8 1320 aa12.61□□□□□ -0.39
HIF3A-205ENST00000377670 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms