RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 AFDNP55196 1824 aaKnown RBP19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 UTYO14607 1347 aa19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 MYH14Q7Z406 1995 aaKnown RBP19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 NEURL1BA8MQ27 555 aa19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 STARD3NLO95772 234 aa19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 UBTFL1P0CB47 393 aaPredicted RBP19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 GCC1Q96CN9 775 aa19.67■□□□□ 0.74
NIPAL3-204ENST00000374399 COL5A3P25940 1745 aaPredicted RBP19.66■□□□□ 0.74
NIPAL3-204ENST00000374399 LOC102724428A0A0B4J2F2 783 aa19.66■□□□□ 0.74
NIPAL3-204ENST00000374399 SIK1P57059 783 aa19.66■□□□□ 0.74
NIPAL3-204ENST00000374399 ITPK1Q13572 414 aa19.66■□□□□ 0.74
NIPAL3-204ENST00000374399 MYD88Q99836 296 aa19.66■□□□□ 0.74
NIPAL3-204ENST00000374399 PNMA6EA0A0J9YXQ4 647 aa19.65■□□□□ 0.74
NIPAL3-204ENST00000374399 ATP8B2P98198 1209 aa19.65■□□□□ 0.74
NIPAL3-204ENST00000374399 ZBTB1Q9Y2K1 713 aa19.65■□□□□ 0.74
NIPAL3-204ENST00000374399 GCKRQ14397 625 aa19.64■□□□□ 0.73
NIPAL3-204ENST00000374399 KAZALD1Q96I82 304 aa19.64■□□□□ 0.73
NIPAL3-204ENST00000374399 GRM8O00222 908 aa19.63■□□□□ 0.73
NIPAL3-204ENST00000374399 INTS5Q6P9B9 1019 aaKnown RBP19.63■□□□□ 0.73
NIPAL3-204ENST00000374399 ATP6V1AP38606 617 aa19.62■□□□□ 0.73
NIPAL3-204ENST00000374399 CHD1LQ86WJ1 897 aa19.62■□□□□ 0.73
NIPAL3-204ENST00000374399 SMARCC1Q92922 1105 aaPredicted RBP19.62■□□□□ 0.73
NIPAL3-204ENST00000374399 EP400Q96L91 3159 aa19.62■□□□□ 0.73
NIPAL3-204ENST00000374399 NEXNQ0ZGT2 675 aa19.62■□□□□ 0.73
NIPAL3-204ENST00000374399 ZBTB3Q9H5J0 574 aa19.62■□□□□ 0.73
NIPAL3-204ENST00000374399 ATP5J2-PTCD1G3V325 749 aa19.61■□□□□ 0.73
NIPAL3-204ENST00000374399 POLA2Q14181 598 aa19.61■□□□□ 0.73
NIPAL3-204ENST00000374399 SSH3Q8TE77 659 aa19.61■□□□□ 0.73
NIPAL3-204ENST00000374399 C9orf78Q9NZ63 289 aaPredicted RBP19.61■□□□□ 0.73
NIPAL3-204ENST00000374399 LY75O60449 1722 aa19.6■□□□□ 0.73
NIPAL3-204ENST00000374399 ANKRD45Q5TZF3 282 aa19.6■□□□□ 0.73
NIPAL3-204ENST00000374399 SUCLG2Q96I99 432 aa19.6■□□□□ 0.73
NIPAL3-204ENST00000374399 LNPKQ9C0E8 428 aa19.6■□□□□ 0.73
NIPAL3-204ENST00000374399 HMMRO75330 724 aa19.59■□□□□ 0.73
NIPAL3-204ENST00000374399 CASP7P55210 303 aa19.59■□□□□ 0.73
NIPAL3-204ENST00000374399 MTX1Q13505 466 aa19.59■□□□□ 0.73
NIPAL3-204ENST00000374399 PPP1R42Q7Z4L9 355 aa19.59■□□□□ 0.73
NIPAL3-204ENST00000374399 IL6STP40189 918 aaPredicted RBP19.59■□□□□ 0.73
NIPAL3-204ENST00000374399 CRKLP46109 303 aaKnown RBP19.59■□□□□ 0.73
NIPAL3-204ENST00000374399 NUP98P52948 1817 aa19.58■□□□□ 0.73
NIPAL3-204ENST00000374399 EIF5P55010 431 aaKnown RBP19.58■□□□□ 0.72
NIPAL3-204ENST00000374399 ISCA1Q9BUE6 129 aa19.58■□□□□ 0.72
NIPAL3-204ENST00000374399 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
NIPAL3-204ENST00000374399 MAP3K15Q6ZN16 1313 aa19.57■□□□□ 0.72
NIPAL3-204ENST00000374399 LINC00116Q8NCU8 138 aa19.57■□□□□ 0.72
NIPAL3-204ENST00000374399 ZNF330Q9Y3S2 320 aaPredicted RBP19.57■□□□□ 0.72
NIPAL3-204ENST00000374399 ANKRD36CQ5JPF3 1778 aa19.57■□□□□ 0.72
NIPAL3-204ENST00000374399 KCNQ4P56696 695 aa19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 HLFQ16534 295 aa19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 EPHA10Q5JZY3 1008 aa19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 ZNF772Q68DY9 489 aaPredicted RBP19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 COL15A1P39059 1388 aa19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 TCIRG1Q13488 830 aa19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
NIPAL3-204ENST00000374399 TAF1LQ8IZX4 1826 aa19.55■□□□□ 0.72
NIPAL3-204ENST00000374399 H7C1W4 665 aa19.55■□□□□ 0.72
NIPAL3-204ENST00000374399 RBM6P78332 1123 aaKnown RBP19.55■□□□□ 0.72
NIPAL3-204ENST00000374399 C8orf34Q49A92 452 aa19.55■□□□□ 0.72
NIPAL3-204ENST00000374399 BICC1Q9H694 974 aaKnown RBP19.55■□□□□ 0.72
NIPAL3-204ENST00000374399 SRGAP3O43295 1099 aa19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 KIF6Q6ZMV9 814 aa19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 KRT27Q7Z3Y8 459 aa19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 FBXO41Q8TF61 875 aa19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 RGS17Q9UGC6 210 aaPredicted RBP19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 A0A087WZG4 1122 aa19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 SMARCA5O60264 1052 aaPredicted RBP19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 TRIM28Q13263 835 aaKnown RBP19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 GIGYF2Q6Y7W6 1299 aaKnown RBP19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 C16orf71Q8IYS4 520 aaPredicted RBP19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 CWC25Q9NXE8 425 aaPredicted RBP19.54■□□□□ 0.72
NIPAL3-204ENST00000374399 UBE3BQ7Z3V4 1068 aa19.53■□□□□ 0.72
NIPAL3-204ENST00000374399 TBC1D2BQ9UPU7 963 aa19.53■□□□□ 0.72
NIPAL3-204ENST00000374399 DZIP3Q86Y13 1208 aaKnown RBP19.52■□□□□ 0.72
NIPAL3-204ENST00000374399 OTUD7AQ8TE49 926 aaPredicted RBP19.52■□□□□ 0.72
NIPAL3-204ENST00000374399 BCL11BQ9C0K0 894 aaPredicted RBP19.52■□□□□ 0.72
NIPAL3-204ENST00000374399 ERVV-1B6SEH8 477 aa19.51■□□□□ 0.71
NIPAL3-204ENST00000374399 RABL6Q3YEC7 729 aaPredicted RBP19.51■□□□□ 0.71
NIPAL3-204ENST00000374399 HDAC5Q9UQL6 1122 aa19.51■□□□□ 0.71
NIPAL3-204ENST00000374399 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
NIPAL3-204ENST00000374399 APBB1O00213 710 aa19.51■□□□□ 0.71
NIPAL3-204ENST00000374399 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
NIPAL3-204ENST00000374399 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
NIPAL3-204ENST00000374399 BCORQ6W2J9 1755 aa19.5■□□□□ 0.71
NIPAL3-204ENST00000374399 FOXO4P98177 505 aa19.5■□□□□ 0.71
NIPAL3-204ENST00000374399 FAM196AQ6ZSG2 479 aa19.5■□□□□ 0.71
NIPAL3-204ENST00000374399 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
NIPAL3-204ENST00000374399 CAMTA2O94983 1202 aa19.49■□□□□ 0.71
NIPAL3-204ENST00000374399 SURF6O75683 361 aaKnown RBP19.48■□□□□ 0.71
NIPAL3-204ENST00000374399 ARXQ96QS3 562 aa19.48■□□□□ 0.71
NIPAL3-204ENST00000374399 PA2G4Q9UQ80 394 aaKnown RBP19.48■□□□□ 0.71
NIPAL3-204ENST00000374399 SALL3Q9BXA9 1300 aa19.48■□□□□ 0.71
NIPAL3-204ENST00000374399 RFX5P48382 616 aaPredicted RBP19.48■□□□□ 0.71
NIPAL3-204ENST00000374399 NLRP10Q86W26 655 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms