RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 LRP5O75197 1615 aa15.55■□□□□ 0.08
PRPF4-202ENST00000374199 DDIT3P35638 169 aa15.55■□□□□ 0.08
PRPF4-202ENST00000374199 CDCA7Q9BWT1 371 aaPredicted RBP15.55■□□□□ 0.08
PRPF4-202ENST00000374199 PI4K2BQ8TCG2 481 aa15.55■□□□□ 0.08
PRPF4-202ENST00000374199 EXOC6BQ9Y2D4 811 aa15.55■□□□□ 0.08
PRPF4-202ENST00000374199 NUP98P52948 1817 aa15.54■□□□□ 0.08
PRPF4-202ENST00000374199 COPS6Q7L5N1 327 aa15.54■□□□□ 0.08
PRPF4-202ENST00000374199 MX1P20591 662 aa15.54■□□□□ 0.08
PRPF4-202ENST00000374199 CWF19L2Q2TBE0 894 aaKnown RBP15.54■□□□□ 0.08
PRPF4-202ENST00000374199 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
PRPF4-202ENST00000374199 SUCLG2Q96I99 432 aa15.54■□□□□ 0.08
PRPF4-202ENST00000374199 BARGINQ6ZT62 677 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 TBC1D2Q9BYX2 928 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 RFX5P48382 616 aaPredicted RBP15.53■□□□□ 0.08
PRPF4-202ENST00000374199 RHPN1Q8TCX5 695 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 KIF1BPQ96EK5 621 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 MYH3P11055 1940 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 SPATA31A5Q5VU36 1347 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 SPATA31A7Q8IWB4 1347 aa15.53■□□□□ 0.08
PRPF4-202ENST00000374199 USP26Q9BXU7 913 aa15.52■□□□□ 0.08
PRPF4-202ENST00000374199 NHSQ6T4R5 1651 aa15.52■□□□□ 0.07
PRPF4-202ENST00000374199 TTC41PQ6P2S7 1318 aa15.52■□□□□ 0.07
PRPF4-202ENST00000374199 SRGAP3O43295 1099 aa15.52■□□□□ 0.07
PRPF4-202ENST00000374199 PIGBQ92521 554 aa15.52■□□□□ 0.07
PRPF4-202ENST00000374199 SPEF2Q9C093 1822 aa15.52■□□□□ 0.07
PRPF4-202ENST00000374199 BCL9LQ86UU0 1499 aa15.52■□□□□ 0.07
PRPF4-202ENST00000374199 EVA1CP58658 441 aa15.51■□□□□ 0.07
PRPF4-202ENST00000374199 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
PRPF4-202ENST00000374199 H7C1W4 665 aa15.51■□□□□ 0.07
PRPF4-202ENST00000374199 MFAP1P55081 439 aaKnown RBP15.51■□□□□ 0.07
PRPF4-202ENST00000374199 STRN4Q9NRL3 753 aa15.51■□□□□ 0.07
PRPF4-202ENST00000374199 ARAP2Q8WZ64 1704 aa15.5■□□□□ 0.07
PRPF4-202ENST00000374199 TRIM28Q13263 835 aaKnown RBP15.5■□□□□ 0.07
PRPF4-202ENST00000374199 TEX13AQ9BXU3 409 aaPredicted RBP15.5■□□□□ 0.07
PRPF4-202ENST00000374199 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
PRPF4-202ENST00000374199 COPRSQ9NQ92 184 aa15.5■□□□□ 0.07
PRPF4-202ENST00000374199 CASZ1Q86V15 1759 aa15.5■□□□□ 0.07
PRPF4-202ENST00000374199 BECN1Q14457 450 aa15.49■□□□□ 0.07
PRPF4-202ENST00000374199 ERC1Q8IUD2 1116 aa15.49■□□□□ 0.07
PRPF4-202ENST00000374199 USP35Q9P2H5 1018 aa15.49■□□□□ 0.07
PRPF4-202ENST00000374199 ISCA1Q9BUE6 129 aa15.49■□□□□ 0.07
PRPF4-202ENST00000374199 SNRKQ9NRH2 765 aa15.49■□□□□ 0.07
PRPF4-202ENST00000374199 RIC3Q7Z5B4 369 aa15.48■□□□□ 0.07
PRPF4-202ENST00000374199 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
PRPF4-202ENST00000374199 LY75O60449 1722 aa15.48■□□□□ 0.07
PRPF4-202ENST00000374199 DDX60Q8IY21 1712 aaKnown RBP15.48■□□□□ 0.07
PRPF4-202ENST00000374199 EPHA10Q5JZY3 1008 aa15.48■□□□□ 0.07
PRPF4-202ENST00000374199 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
PRPF4-202ENST00000374199 SCN7AQ01118 1682 aa15.48■□□□□ 0.07
PRPF4-202ENST00000374199 MYL6BP14649 208 aa15.47■□□□□ 0.07
PRPF4-202ENST00000374199 FOXO4P98177 505 aa15.47■□□□□ 0.07
PRPF4-202ENST00000374199 BCL11AQ9H165 835 aa15.47■□□□□ 0.07
PRPF4-202ENST00000374199 TMOD3Q9NYL9 352 aa15.47■□□□□ 0.07
PRPF4-202ENST00000374199 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
PRPF4-202ENST00000374199 SASH1O94885 1247 aa15.47■□□□□ 0.07
PRPF4-202ENST00000374199 NEXNQ0ZGT2 675 aa15.47■□□□□ 0.07
PRPF4-202ENST00000374199 MYD88Q99836 296 aa15.47■□□□□ 0.07
PRPF4-202ENST00000374199 SBF2Q86WG5 1849 aa15.46■□□□□ 0.07
PRPF4-202ENST00000374199 JCADQ9P266 1359 aa15.46■□□□□ 0.07
PRPF4-202ENST00000374199 SURF6O75683 361 aaKnown RBP15.46■□□□□ 0.07
PRPF4-202ENST00000374199 PLA2G12BQ9BX93 195 aa15.46■□□□□ 0.07
PRPF4-202ENST00000374199 CHMLP26374 656 aa15.46■□□□□ 0.07
PRPF4-202ENST00000374199 CCDC191Q8NCU4 936 aa15.45■□□□□ 0.06
PRPF4-202ENST00000374199 MYH14Q7Z406 1995 aaKnown RBP15.45■□□□□ 0.06
PRPF4-202ENST00000374199 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
PRPF4-202ENST00000374199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.45■□□□□ 0.06
PRPF4-202ENST00000374199 COL24A1Q17RW2 1714 aa15.45■□□□□ 0.06
PRPF4-202ENST00000374199 ERICH6Q7L0X2 663 aa15.45■□□□□ 0.06
PRPF4-202ENST00000374199 DDX54Q8TDD1 881 aaKnown RBP15.45■□□□□ 0.06
PRPF4-202ENST00000374199 ESYT1Q9BSJ8 1104 aa15.45■□□□□ 0.06
PRPF4-202ENST00000374199 A0A1B0GUL6 1792 aa15.45■□□□□ 0.06
PRPF4-202ENST00000374199 RFX7Q2KHR2 1363 aa15.44■□□□□ 0.06
PRPF4-202ENST00000374199 TOM1O60784 492 aa15.44■□□□□ 0.06
PRPF4-202ENST00000374199 CYP19A1P11511 503 aaPredicted RBP15.44■□□□□ 0.06
PRPF4-202ENST00000374199 TTLL7Q6ZT98 887 aa15.44■□□□□ 0.06
PRPF4-202ENST00000374199 ERC2O15083 957 aa15.44■□□□□ 0.06
PRPF4-202ENST00000374199 SLC4A3P48751 1232 aa15.44■□□□□ 0.06
PRPF4-202ENST00000374199 PTPN12Q05209 780 aaKnown RBP15.44■□□□□ 0.06
PRPF4-202ENST00000374199 AIMP1Q12904 312 aaKnown RBP15.44■□□□□ 0.06
PRPF4-202ENST00000374199 UNC5CLQ8IV45 518 aa15.44■□□□□ 0.06
PRPF4-202ENST00000374199 TICAM2Q86XR7 235 aa15.43■□□□□ 0.06
PRPF4-202ENST00000374199 TAF1LQ8IZX4 1826 aa15.43■□□□□ 0.06
PRPF4-202ENST00000374199 A1BGP04217 495 aa15.43■□□□□ 0.06
PRPF4-202ENST00000374199 FNBP4Q8N3X1 1017 aaPredicted RBP15.43■□□□□ 0.06
PRPF4-202ENST00000374199 BTAF1O14981 1849 aa15.42■□□□□ 0.06
PRPF4-202ENST00000374199 CDHR2Q9BYE9 1310 aa15.42■□□□□ 0.06
PRPF4-202ENST00000374199 EXOC5O00471 708 aa15.42■□□□□ 0.06
PRPF4-202ENST00000374199 REC8O95072 547 aa15.42■□□□□ 0.06
PRPF4-202ENST00000374199 CASC1Q6TDU7 716 aa15.41■□□□□ 0.06
PRPF4-202ENST00000374199 ANAPC15P60006 121 aa15.41■□□□□ 0.06
PRPF4-202ENST00000374199 KCNB2Q92953 911 aa15.41■□□□□ 0.06
PRPF4-202ENST00000374199 RABEP1Q15276 862 aa15.41■□□□□ 0.06
PRPF4-202ENST00000374199 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
PRPF4-202ENST00000374199 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
PRPF4-202ENST00000374199 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
PRPF4-202ENST00000374199 CD2BP2O95400 341 aaKnown RBP15.4■□□□□ 0.06
PRPF4-202ENST00000374199 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
PRPF4-202ENST00000374199 TCIRG1Q13488 830 aa15.4■□□□□ 0.06
PRPF4-202ENST00000374199 VPS72Q15906 364 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 1332.5 ms