RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 GSPT1P15170 499 aaKnown RBP19.45■□□□□ 0.7
HDAC8-209ENST00000373589 VPS72Q15906 364 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 MARCH10Q8NA82 808 aaPredicted RBP19.45■□□□□ 0.7
HDAC8-209ENST00000373589 KAZALD1Q96I82 304 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
HDAC8-209ENST00000373589 RAB11FIP3O75154 756 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
HDAC8-209ENST00000373589 TTC22Q5TAA0 569 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 DNAJC10Q8IXB1 793 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 NGLY1Q96IV0 654 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 C8orf37Q96NL8 207 aa19.45■□□□□ 0.7
HDAC8-209ENST00000373589 DOT1LQ8TEK3 1739 aa19.44■□□□□ 0.7
HDAC8-209ENST00000373589 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
HDAC8-209ENST00000373589 OSBPL3Q9H4L5 887 aa19.44■□□□□ 0.7
HDAC8-209ENST00000373589 SALL3Q9BXA9 1300 aa19.44■□□□□ 0.7
HDAC8-209ENST00000373589 SLC4A9Q96Q91 983 aa19.43■□□□□ 0.7
HDAC8-209ENST00000373589 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
HDAC8-209ENST00000373589 SURF6O75683 361 aaKnown RBP19.42■□□□□ 0.7
HDAC8-209ENST00000373589 RBM42Q9BTD8 480 aaKnown RBP19.42■□□□□ 0.7
HDAC8-209ENST00000373589 STARD3NLO95772 234 aa19.42■□□□□ 0.7
HDAC8-209ENST00000373589 SYTL4Q96C24 671 aaPredicted RBP19.42■□□□□ 0.7
HDAC8-209ENST00000373589 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
HDAC8-209ENST00000373589 COL15A1P39059 1388 aa19.42■□□□□ 0.7
HDAC8-209ENST00000373589 NUP188Q5SRE5 1749 aa19.42■□□□□ 0.7
HDAC8-209ENST00000373589 DDRGK1Q96HY6 314 aa19.41■□□□□ 0.7
HDAC8-209ENST00000373589 TBC1D32Q96NH3 1257 aa19.41■□□□□ 0.7
HDAC8-209ENST00000373589 BICC1Q9H694 974 aaKnown RBP19.41■□□□□ 0.7
HDAC8-209ENST00000373589 PDE1AP54750 535 aa19.4■□□□□ 0.7
HDAC8-209ENST00000373589 HSP90AB4PQ58FF6 505 aa19.4■□□□□ 0.7
HDAC8-209ENST00000373589 ATP5J2-PTCD1G3V325 749 aa19.39■□□□□ 0.7
HDAC8-209ENST00000373589 CYP19A1P11511 503 aaPredicted RBP19.39■□□□□ 0.7
HDAC8-209ENST00000373589 CASP7P55210 303 aa19.39■□□□□ 0.69
HDAC8-209ENST00000373589 FAM98CQ17RN3 349 aaKnown RBP19.39■□□□□ 0.69
HDAC8-209ENST00000373589 RHPN1Q8TCX5 695 aa19.39■□□□□ 0.69
HDAC8-209ENST00000373589 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
HDAC8-209ENST00000373589 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
HDAC8-209ENST00000373589 STAP2Q9UGK3 403 aa19.39■□□□□ 0.69
HDAC8-209ENST00000373589 TBC1D9Q6ZT07 1266 aa19.38■□□□□ 0.69
HDAC8-209ENST00000373589 AFDNP55196 1824 aaKnown RBP19.37■□□□□ 0.69
HDAC8-209ENST00000373589 CDC45O75419 566 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 EPHA10Q5JZY3 1008 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 ZBTB3Q9H5J0 574 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.37■□□□□ 0.69
HDAC8-209ENST00000373589 A0A087WZG4 1122 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 H7C1W4 665 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 MX1P20591 662 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 MFAP1P55081 439 aaKnown RBP19.37■□□□□ 0.69
HDAC8-209ENST00000373589 ACSBG1Q96GR2 724 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 USP21Q9UK80 565 aa19.37■□□□□ 0.69
HDAC8-209ENST00000373589 SDSP20132 328 aa19.36■□□□□ 0.69
HDAC8-209ENST00000373589 HSPA1LP34931 641 aa19.36■□□□□ 0.69
HDAC8-209ENST00000373589 RABL6Q3YEC7 729 aaPredicted RBP19.36■□□□□ 0.69
HDAC8-209ENST00000373589 UBE3BQ7Z3V4 1068 aa19.36■□□□□ 0.69
HDAC8-209ENST00000373589 IL1RAPL2Q9NP60 686 aa19.36■□□□□ 0.69
HDAC8-209ENST00000373589 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
HDAC8-209ENST00000373589 TJP1Q07157 1748 aa19.36■□□□□ 0.69
HDAC8-209ENST00000373589 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
HDAC8-209ENST00000373589 CWC25Q9NXE8 425 aaPredicted RBP19.35■□□□□ 0.69
HDAC8-209ENST00000373589 AOX1Q06278 1338 aa19.35■□□□□ 0.69
HDAC8-209ENST00000373589 ISCA1Q9BUE6 129 aa19.34■□□□□ 0.69
HDAC8-209ENST00000373589 PA2G4Q9UQ80 394 aaKnown RBP19.34■□□□□ 0.69
HDAC8-209ENST00000373589 TCIRG1Q13488 830 aa19.34■□□□□ 0.69
HDAC8-209ENST00000373589 ERC1Q8IUD2 1116 aa19.34■□□□□ 0.69
HDAC8-209ENST00000373589 JARID2Q92833 1246 aaPredicted RBP19.34■□□□□ 0.69
HDAC8-209ENST00000373589 C22orf23Q9BZE7 217 aa19.34■□□□□ 0.69
HDAC8-209ENST00000373589 TRIM28Q13263 835 aaKnown RBP19.33■□□□□ 0.68
HDAC8-209ENST00000373589 KIF6Q6ZMV9 814 aa19.33■□□□□ 0.68
HDAC8-209ENST00000373589 ZBTB1Q9Y2K1 713 aa19.33■□□□□ 0.68
HDAC8-209ENST00000373589 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
HDAC8-209ENST00000373589 MAP3K15Q6ZN16 1313 aa19.32■□□□□ 0.68
HDAC8-209ENST00000373589 RFX5P48382 616 aaPredicted RBP19.31■□□□□ 0.68
HDAC8-209ENST00000373589 OS9Q13438 667 aaPredicted RBP19.31■□□□□ 0.68
HDAC8-209ENST00000373589 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
HDAC8-209ENST00000373589 ZNF330Q9Y3S2 320 aaPredicted RBP19.31■□□□□ 0.68
HDAC8-209ENST00000373589 THSD7AQ9UPZ6 1657 aa19.31■□□□□ 0.68
HDAC8-209ENST00000373589 TUBGCP6Q96RT7 1819 aa19.31■□□□□ 0.68
HDAC8-209ENST00000373589 LOC102724428A0A0B4J2F2 783 aa19.31■□□□□ 0.68
HDAC8-209ENST00000373589 KCNQ2O43526 872 aa19.31■□□□□ 0.68
HDAC8-209ENST00000373589 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
HDAC8-209ENST00000373589 SIK1P57059 783 aa19.31■□□□□ 0.68
HDAC8-209ENST00000373589 NUTM1Q86Y26 1132 aa19.31■□□□□ 0.68
HDAC8-209ENST00000373589 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
HDAC8-209ENST00000373589 EIF5BO60841 1220 aaKnown RBP19.3■□□□□ 0.68
HDAC8-209ENST00000373589 RBM25P49756 843 aaKnown RBP19.3■□□□□ 0.68
HDAC8-209ENST00000373589 FOXO4P98177 505 aa19.3■□□□□ 0.68
HDAC8-209ENST00000373589 GIGYF2Q6Y7W6 1299 aaKnown RBP19.3■□□□□ 0.68
HDAC8-209ENST00000373589 COPRSQ9NQ92 184 aa19.3■□□□□ 0.68
HDAC8-209ENST00000373589 PALLDQ8WX93 1383 aa19.29■□□□□ 0.68
HDAC8-209ENST00000373589 SASH1O94885 1247 aa19.29■□□□□ 0.68
HDAC8-209ENST00000373589 G3BP1Q13283 466 aaKnown RBP eCLIP19.29■□□□□ 0.68
HDAC8-209ENST00000373589 CLASRPQ8N2M8 674 aaKnown RBP19.29■□□□□ 0.68
HDAC8-209ENST00000373589 SMARCC1Q92922 1105 aaPredicted RBP19.29■□□□□ 0.68
HDAC8-209ENST00000373589 A0A0G2JS52 829 aa19.28■□□□□ 0.68
HDAC8-209ENST00000373589 ATP6V1AP38606 617 aa19.28■□□□□ 0.68
HDAC8-209ENST00000373589 MEX3CQ5U5Q3 659 aaKnown RBP19.28■□□□□ 0.68
HDAC8-209ENST00000373589 INTS5Q6P9B9 1019 aaKnown RBP19.28■□□□□ 0.68
HDAC8-209ENST00000373589 PTPN12Q05209 780 aaKnown RBP19.28■□□□□ 0.68
HDAC8-209ENST00000373589 PI4K2BQ8TCG2 481 aa19.28■□□□□ 0.68
HDAC8-209ENST00000373589 ERVV-1B6SEH8 477 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms