RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 PIP4K2BP78356 416 aa7.76□□□□□ -1.17
CHD6-203ENST00000373233 LUZP1Q86V48 1076 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 AATKQ6ZMQ8 1374 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 TRIM27P14373 513 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 LMAN1P49257 510 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 SMC2O95347 1197 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 ADGRL3Q9HAR2 1447 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 MPRIPQ6WCQ1 1025 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 GBP6Q6ZN66 633 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 A0A1B0GUL7 405 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 GNAI2P04899 355 aa7.75□□□□□ -1.17
CHD6-203ENST00000373233 CLASRPQ8N2M8 674 aaKnown RBP7.75□□□□□ -1.17
CHD6-203ENST00000373233 RSPH14Q9UHP6 348 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 FMN2Q9NZ56 1722 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 ADAMTS13Q76LX8 1427 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 SF3A1Q15459 793 aaKnown RBP7.74□□□□□ -1.17
CHD6-203ENST00000373233 IP6K1Q92551 441 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
CHD6-203ENST00000373233 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
CHD6-203ENST00000373233 DHX8Q14562 1220 aaKnown RBP7.74□□□□□ -1.17
CHD6-203ENST00000373233 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
CHD6-203ENST00000373233 SWAP70Q9UH65 585 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 UBXN4Q92575 508 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 RABEP1Q15276 862 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 FAM184AQ8NB25 1140 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 LRRC7Q96NW7 1537 aa7.74□□□□□ -1.17
CHD6-203ENST00000373233 CHRNA2Q15822 529 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 PDILTQ8N807 584 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 MON2Q7Z3U7 1717 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 CCDC73Q6ZRK6 1079 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 RASSF8Q8NHQ8 419 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 RNF187Q5TA31 235 aaPredicted RBP7.73□□□□□ -1.17
CHD6-203ENST00000373233 DRC1Q96MC2 740 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 TRIM35Q9UPQ4 493 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 RTL1A6NKG5 1358 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 G3BP1Q13283 466 aaKnown RBP eCLIP7.73□□□□□ -1.171e-6■■■□□ 16
CHD6-203ENST00000373233 SPINK5Q9NQ38 1064 aaPredicted RBP7.73□□□□□ -1.17
CHD6-203ENST00000373233 SEPT6Q14141 434 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 ORAI2Q96SN7 254 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 CERS3Q8IU89 383 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 DDX54Q8TDD1 881 aaKnown RBP7.73□□□□□ -1.17
CHD6-203ENST00000373233 GCC1Q96CN9 775 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 PTPRCP08575 1304 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 TECPR2O15040 1411 aa7.73□□□□□ -1.17
CHD6-203ENST00000373233 OFD1O75665 1012 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 CCAR1Q8IX12 1150 aaKnown RBP7.72□□□□□ -1.17
CHD6-203ENST00000373233 VPS37CA5D8V6 355 aaPredicted RBP7.72□□□□□ -1.17
CHD6-203ENST00000373233 PRPF40AO75400 957 aaKnown RBP7.72□□□□□ -1.17
CHD6-203ENST00000373233 MTHFSDQ2M296 383 aaKnown RBP7.72□□□□□ -1.17
CHD6-203ENST00000373233 RILPL2Q969X0 211 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 EYA1Q99502 592 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 HSP90AB4PQ58FF6 505 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 FILIP1Q7Z7B0 1213 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 CEP89Q96ST8 783 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 SRCIN1Q9C0H9 1055 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 IFIT2P09913 472 aaKnown RBP7.72□□□□□ -1.17
CHD6-203ENST00000373233 CCDC192P0DO97 292 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 KIF6Q6ZMV9 814 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 LRRFIP2Q9Y608 721 aaKnown RBP7.72□□□□□ -1.17
CHD6-203ENST00000373233 TMEM94Q12767 1356 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 SLIT1O75093 1534 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 MAP2K2P36507 400 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 NAA25Q14CX7 972 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 LRRC59Q96AG4 307 aaKnown RBP7.72□□□□□ -1.17
CHD6-203ENST00000373233 CDC45O75419 566 aa7.72□□□□□ -1.17
CHD6-203ENST00000373233 EZRP15311 586 aaKnown RBP7.71□□□□□ -1.17
CHD6-203ENST00000373233 IQCEQ6IPM2 695 aa7.71□□□□□ -1.17
CHD6-203ENST00000373233 CHMP4CQ96CF2 233 aa7.71□□□□□ -1.17
CHD6-203ENST00000373233 MRPL50Q8N5N7 158 aaKnown RBP7.71□□□□□ -1.17
CHD6-203ENST00000373233 C16orf45Q96MC5 204 aaPredicted RBP7.71□□□□□ -1.17
CHD6-203ENST00000373233 TMX1Q9H3N1 280 aa7.71□□□□□ -1.17
CHD6-203ENST00000373233 DMTNQ08495 405 aa7.71□□□□□ -1.17
CHD6-203ENST00000373233 C10orf67Q8IYJ2 551 aa7.71□□□□□ -1.17
CHD6-203ENST00000373233 CACNA1FO60840 1977 aa7.71□□□□□ -1.18
CHD6-203ENST00000373233 RNF123Q5XPI4 1314 aa7.71□□□□□ -1.18
CHD6-203ENST00000373233 SYCE3A1L190 88 aa7.71□□□□□ -1.18
CHD6-203ENST00000373233 RBM42Q9BTD8 480 aaKnown RBP7.71□□□□□ -1.18
CHD6-203ENST00000373233 DLG5Q8TDM6 1919 aa7.71□□□□□ -1.18
CHD6-203ENST00000373233 NAP1L1P55209 391 aaKnown RBP7.71□□□□□ -1.18
CHD6-203ENST00000373233 CABLES1Q8TDN4 633 aa7.71□□□□□ -1.18
CHD6-203ENST00000373233 MYL6BP14649 208 aa7.71□□□□□ -1.18
CHD6-203ENST00000373233 DDX17Q92841 729 aaKnown RBP7.71□□□□□ -1.18
CHD6-203ENST00000373233 LMTK3Q96Q04 1460 aa7.71□□□□□ -1.18
CHD6-203ENST00000373233 NRXN3Q9Y4C0 1643 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 NUP133Q8WUM0 1156 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 CPSF1Q10570 1443 aaKnown RBP7.7□□□□□ -1.18
CHD6-203ENST00000373233 CLNS1AP54105 237 aaKnown RBP7.7□□□□□ -1.18
CHD6-203ENST00000373233 GABPB1Q06547 395 aaPredicted RBP7.7□□□□□ -1.18
CHD6-203ENST00000373233 SPATA24Q86W54 205 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 RNF168Q8IYW5 571 aaPredicted RBP7.7□□□□□ -1.18
CHD6-203ENST00000373233 C8orf58Q8NAV2 365 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 SHPRHQ149N8 1683 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 CHD1LQ86WJ1 897 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 GCP02774 474 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 XRCC6P12956 609 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHD6-203ENST00000373233 RSRC1Q96IZ7 334 aaKnown RBP7.7□□□□□ -1.18
CHD6-203ENST00000373233 PLEKHF1Q96S99 279 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 HYPKQ9NX55 129 aa7.7□□□□□ -1.18
CHD6-203ENST00000373233 ZBTB12Q9Y330 459 aaPredicted RBP7.7□□□□□ -1.18
CHD6-203ENST00000373233 GOLGA6L10A0A0M3HER8 536 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms