RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 YY1AP1Q9H869 796 aa21.75■■□□□ 1.07
MMP9-201ENST00000372330 OTUD7AQ8TE49 926 aaPredicted RBP21.75■■□□□ 1.07
MMP9-201ENST00000372330 KIAA0232Q92628 1395 aa21.75■■□□□ 1.07
MMP9-201ENST00000372330 EPB41L2O43491 1005 aaKnown RBP21.74■■□□□ 1.07
MMP9-201ENST00000372330 HNRNPH2P55795 449 aaKnown RBP21.74■■□□□ 1.07
MMP9-201ENST00000372330 ZSCAN25Q6NSZ9 544 aa21.74■■□□□ 1.07
MMP9-201ENST00000372330 CCDC171Q6TFL3 1326 aa21.74■■□□□ 1.07
MMP9-201ENST00000372330 DIP2AQ14689 1571 aa21.74■■□□□ 1.07
MMP9-201ENST00000372330 MAP3K19Q56UN5 1328 aa21.73■■□□□ 1.07
MMP9-201ENST00000372330 ARHGEF10O15013 1369 aa21.73■■□□□ 1.07
MMP9-201ENST00000372330 RGPD8O14715 1765 aaPredicted RBP21.73■■□□□ 1.07
MMP9-201ENST00000372330 HTATSF1O43719 755 aaKnown RBP21.73■■□□□ 1.07
MMP9-201ENST00000372330 CHRM1P11229 460 aaPredicted RBP21.73■■□□□ 1.07
MMP9-201ENST00000372330 DRC7Q8IY82 874 aa21.72■■□□□ 1.07
MMP9-201ENST00000372330 RGS22Q8NE09 1264 aa21.72■■□□□ 1.07
MMP9-201ENST00000372330 FBXO38Q6PIJ6 1188 aa21.72■■□□□ 1.07
MMP9-201ENST00000372330 ESYT1Q9BSJ8 1104 aa21.72■■□□□ 1.07
MMP9-201ENST00000372330 NEMFO60524 1076 aa21.71■■□□□ 1.07
MMP9-201ENST00000372330 ZNF215Q9UL58 517 aaPredicted RBP21.71■■□□□ 1.07
MMP9-201ENST00000372330 MAPK8IP2Q13387 824 aaPredicted RBP21.71■■□□□ 1.07
MMP9-201ENST00000372330 SBNO1A3KN83 1393 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 FLT4P35916 1363 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 CRB1P82279 1406 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 XRN1Q8IZH2 1706 aaKnown RBP21.7■■□□□ 1.06
MMP9-201ENST00000372330 KCNA6P17658 529 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 TNNT3P45378 269 aaPredicted RBP21.7■■□□□ 1.06
MMP9-201ENST00000372330 RAD51AP2Q09MP3 1159 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 LRMPQ12912 555 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 CHMP4AQ9BY43 222 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 TCHHQ07283 1943 aa21.7■■□□□ 1.06
MMP9-201ENST00000372330 STX6O43752 255 aa21.69■■□□□ 1.06
MMP9-201ENST00000372330 TEX35Q5T0J7 233 aa21.69■■□□□ 1.06
MMP9-201ENST00000372330 NGDNQ8NEJ9 315 aaKnown RBP21.69■■□□□ 1.06
MMP9-201ENST00000372330 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.69■■□□□ 1.06
MMP9-201ENST00000372330 MUM1L1Q5H9M0 696 aa21.69■■□□□ 1.06
MMP9-201ENST00000372330 PLA2G4DQ86XP0 818 aa21.69■■□□□ 1.06
MMP9-201ENST00000372330 PTPRCP08575 1304 aa21.69■■□□□ 1.06
MMP9-201ENST00000372330 ATP10DQ9P241 1426 aa21.69■■□□□ 1.06
MMP9-201ENST00000372330 F13A1P00488 732 aa21.68■■□□□ 1.06
MMP9-201ENST00000372330 CEP85Q6P2H3 762 aa21.68■■□□□ 1.06
MMP9-201ENST00000372330 CTR9Q6PD62 1173 aa21.68■■□□□ 1.06
MMP9-201ENST00000372330 PTPN14Q15678 1187 aa21.68■■□□□ 1.06
MMP9-201ENST00000372330 TXLNBQ8N3L3 684 aa21.68■■□□□ 1.06
MMP9-201ENST00000372330 PALD1Q9ULE6 856 aa21.68■■□□□ 1.06
MMP9-201ENST00000372330 KDRP35968 1356 aa21.68■■□□□ 1.06
MMP9-201ENST00000372330 KIF2AO00139 706 aaPredicted RBP21.67■■□□□ 1.06
MMP9-201ENST00000372330 SLU7O95391 586 aaKnown RBP21.67■■□□□ 1.06
MMP9-201ENST00000372330 ZNF75DP51815 510 aa21.67■■□□□ 1.06
MMP9-201ENST00000372330 PDE1AP54750 535 aa21.67■■□□□ 1.06
MMP9-201ENST00000372330 NOL8Q76FK4 1167 aaKnown RBP21.67■■□□□ 1.06
MMP9-201ENST00000372330 FIBPO43427 364 aa21.67■■□□□ 1.06
MMP9-201ENST00000372330 FOXO3O43524 673 aa21.67■■□□□ 1.06
MMP9-201ENST00000372330 MAP3K11Q16584 847 aa21.67■■□□□ 1.06
MMP9-201ENST00000372330 MTHFSDQ2M296 383 aaKnown RBP21.67■■□□□ 1.06
MMP9-201ENST00000372330 ZNF592Q92610 1267 aa21.67■■□□□ 1.06
MMP9-201ENST00000372330 CDC25BP30305 580 aa21.66■■□□□ 1.06
MMP9-201ENST00000372330 NYAP1Q6ZVC0 841 aa21.66■■□□□ 1.06
MMP9-201ENST00000372330 TRIM5Q9C035 493 aa21.66■■□□□ 1.06
MMP9-201ENST00000372330 GEMIN8Q9NWZ8 242 aaKnown RBP21.66■■□□□ 1.06
MMP9-201ENST00000372330 FMN2Q9NZ56 1722 aa21.66■■□□□ 1.06
MMP9-201ENST00000372330 SYT1P21579 422 aa21.66■■□□□ 1.06
MMP9-201ENST00000372330 RASSF4Q9H2L5 321 aa21.66■■□□□ 1.06
MMP9-201ENST00000372330 ADAMTSL3P82987 1691 aa21.65■■□□□ 1.06
MMP9-201ENST00000372330 RTF1Q92541 710 aaKnown RBP21.65■■□□□ 1.06
MMP9-201ENST00000372330 IGSF1Q8N6C5 1336 aa21.65■■□□□ 1.06
MMP9-201ENST00000372330 HMMRO75330 724 aa21.64■■□□□ 1.06
MMP9-201ENST00000372330 H2AFXP16104 143 aaPredicted RBP21.64■■□□□ 1.06
MMP9-201ENST00000372330 ELF2Q15723 593 aa21.64■■□□□ 1.06
MMP9-201ENST00000372330 MRVI1Q9Y6F6 885 aa21.64■■□□□ 1.06
MMP9-201ENST00000372330 AMPHP49418 695 aa21.64■■□□□ 1.05
MMP9-201ENST00000372330 TYRO3Q06418 890 aa21.64■■□□□ 1.05
MMP9-201ENST00000372330 ANKLE2Q86XL3 938 aa21.64■■□□□ 1.05
MMP9-201ENST00000372330 CACTINQ8WUQ7 758 aaKnown RBP21.64■■□□□ 1.05
MMP9-201ENST00000372330 ANO2Q9NQ90 1003 aa21.64■■□□□ 1.05
MMP9-201ENST00000372330 ZNF446Q9NWS9 450 aa21.64■■□□□ 1.05
MMP9-201ENST00000372330 MIS18AQ9NYP9 233 aa21.64■■□□□ 1.05
MMP9-201ENST00000372330 TPM4P67936 248 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 ZFP91Q96JP5 570 aaPredicted RBP21.63■■□□□ 1.05
MMP9-201ENST00000372330 EYA1Q99502 592 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 NRBP1Q9UHY1 535 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 PIK3C2AO00443 1686 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 CAVIN2O95810 425 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 TDRD7Q8NHU6 1098 aaKnown RBP21.63■■□□□ 1.05
MMP9-201ENST00000372330 KCND1Q9NSA2 647 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 MSH6P52701 1360 aa21.63■■□□□ 1.05
MMP9-201ENST00000372330 LUZP1Q86V48 1076 aa21.62■■□□□ 1.05
MMP9-201ENST00000372330 UPF3BQ9BZI7 483 aaKnown RBP21.62■■□□□ 1.05
MMP9-201ENST00000372330 NUP62CLQ9H1M0 184 aa21.62■■□□□ 1.05
MMP9-201ENST00000372330 ST7Q9NRC1 585 aa21.62■■□□□ 1.05
MMP9-201ENST00000372330 CLIP2Q9UDT6 1046 aa21.62■■□□□ 1.05
MMP9-201ENST00000372330 TSPYL4Q9UJ04 414 aa21.62■■□□□ 1.05
MMP9-201ENST00000372330 ANKARQ7Z5J8 1434 aa21.61■■□□□ 1.05
MMP9-201ENST00000372330 CBX8Q9HC52 389 aa21.61■■□□□ 1.05
MMP9-201ENST00000372330 FHOD1Q9Y613 1164 aa21.61■■□□□ 1.05
MMP9-201ENST00000372330 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
MMP9-201ENST00000372330 NUTM2GQ5VZR2 741 aa21.61■■□□□ 1.05
MMP9-201ENST00000372330 LRRC8AQ8IWT6 810 aa21.61■■□□□ 1.05
MMP9-201ENST00000372330 SMC3Q9UQE7 1217 aa21.61■■□□□ 1.05
MMP9-201ENST00000372330 CHMLP26374 656 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms