RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 UBR2Q8IWV8 1755 aa21.37■■□□□ 1.01
LMNA-205ENST00000368299 TTC41PQ6P2S7 1318 aa21.37■■□□□ 1.01
LMNA-205ENST00000368299 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
LMNA-205ENST00000368299 ESYT1Q9BSJ8 1104 aa21.36■■□□□ 1.01
LMNA-205ENST00000368299 BICC1Q9H694 974 aaKnown RBP21.36■■□□□ 1.01
LMNA-205ENST00000368299 SHANK3Q9BYB0 1731 aa21.36■■□□□ 1.01
LMNA-205ENST00000368299 CHMLP26374 656 aa21.36■■□□□ 1.01
LMNA-205ENST00000368299 SPRYD3Q8NCJ5 442 aa21.36■■□□□ 1.01
LMNA-205ENST00000368299 PLBD2Q8NHP8 589 aa21.36■■□□□ 1.01
LMNA-205ENST00000368299 KAZALD1Q96I82 304 aa21.36■■□□□ 1.01
LMNA-205ENST00000368299 PAPPAQ13219 1627 aa21.36■■□□□ 1.01
LMNA-205ENST00000368299 PI4K2BQ8TCG2 481 aa21.35■■□□□ 1.01
LMNA-205ENST00000368299 EPB41L2O43491 1005 aaKnown RBP21.35■■□□□ 1.01
LMNA-205ENST00000368299 COL15A1P39059 1388 aa21.34■■□□□ 1.01
LMNA-205ENST00000368299 BTG4Q9NY30 223 aa21.34■■□□□ 1.01
LMNA-205ENST00000368299 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
LMNA-205ENST00000368299 TNS2Q63HR2 1409 aa21.34■■□□□ 1.01
LMNA-205ENST00000368299 GPATCH3Q96I76 525 aa21.34■■□□□ 1.01
LMNA-205ENST00000368299 CIZ1Q9ULV3 898 aaPredicted RBP21.34■■□□□ 1.01
LMNA-205ENST00000368299 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1.01
LMNA-205ENST00000368299 AHDC1Q5TGY3 1603 aaPredicted RBP21.33■■□□□ 1.01
LMNA-205ENST00000368299 RBM42Q9BTD8 480 aaKnown RBP21.33■■□□□ 1.01
LMNA-205ENST00000368299 GLRX3O76003 335 aaKnown RBP21.32■■□□□ 1
LMNA-205ENST00000368299 G3BP1Q13283 466 aaKnown RBP eCLIP21.32■■□□□ 17e-9■■■□□ 16
LMNA-205ENST00000368299 CNTROBQ8N137 903 aa21.32■■□□□ 1
LMNA-205ENST00000368299 DDIT3P35638 169 aa21.32■■□□□ 1
LMNA-205ENST00000368299 MCCP23508 829 aa21.31■■□□□ 1
LMNA-205ENST00000368299 ROBO1Q9Y6N7 1651 aa21.31■■□□□ 1
LMNA-205ENST00000368299 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
LMNA-205ENST00000368299 CD2BP2O95400 341 aaKnown RBP21.31■■□□□ 1
LMNA-205ENST00000368299 HSP90AA1P07900 732 aaKnown RBP21.31■■□□□ 1
LMNA-205ENST00000368299 PIP4K2AP48426 406 aaPredicted RBP21.31■■□□□ 1
LMNA-205ENST00000368299 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
LMNA-205ENST00000368299 PA2G4Q9UQ80 394 aaKnown RBP21.31■■□□□ 1
LMNA-205ENST00000368299 COL22A1Q8NFW1 1626 aaPredicted RBP21.3■■□□□ 1
LMNA-205ENST00000368299 ST18O60284 1047 aa21.3■■□□□ 1
LMNA-205ENST00000368299 IFIT2P09913 472 aaKnown RBP21.3■■□□□ 1
LMNA-205ENST00000368299 UNC5CLQ8IV45 518 aa21.3■■□□□ 1
LMNA-205ENST00000368299 NBPF26B4DH59 902 aa21.3■■□□□ 1
LMNA-205ENST00000368299 NBPF14Q5TI25 921 aa21.3■■□□□ 1
LMNA-205ENST00000368299 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
LMNA-205ENST00000368299 NBPF15Q8N660 670 aa21.3■■□□□ 1
LMNA-205ENST00000368299 ECHDC1Q9NTX5 307 aa21.29■■□□□ 1
LMNA-205ENST00000368299 ANAPC15P60006 121 aa21.29■■□□□ 1
LMNA-205ENST00000368299 PTCD1O75127 700 aaKnown RBP21.27■■□□□ 1
LMNA-205ENST00000368299 RABL6Q3YEC7 729 aaPredicted RBP21.27■■□□□ 1
LMNA-205ENST00000368299 TEX13AQ9BXU3 409 aaPredicted RBP21.27■■□□□ 1
LMNA-205ENST00000368299 ANO2Q9NQ90 1003 aa21.27■■□□□ 1
LMNA-205ENST00000368299 DISP2A7MBM2 1401 aa21.27■■□□□ 1
LMNA-205ENST00000368299 VSIG10Q8N0Z9 540 aa21.27■■□□□ 1
LMNA-205ENST00000368299 AFDNP55196 1824 aaKnown RBP21.27■■□□□ 1
LMNA-205ENST00000368299 A0A087WZG4 1122 aa21.26■□□□□ 0.99
LMNA-205ENST00000368299 SASH1O94885 1247 aa21.26■□□□□ 0.99
LMNA-205ENST00000368299 COPRSQ9NQ92 184 aa21.26■□□□□ 0.99
LMNA-205ENST00000368299 TOGARAM1Q9Y4F4 1720 aa21.26■□□□□ 0.99
LMNA-205ENST00000368299 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
LMNA-205ENST00000368299 AACSQ86V21 672 aa21.26■□□□□ 0.99
LMNA-205ENST00000368299 EPHA10Q5JZY3 1008 aa21.25■□□□□ 0.99
LMNA-205ENST00000368299 IL17RAQ96F46 866 aa21.25■□□□□ 0.99
LMNA-205ENST00000368299 BRPF3Q9ULD4 1205 aa21.25■□□□□ 0.99
LMNA-205ENST00000368299 AK9Q5TCS8 1911 aa21.25■□□□□ 0.99
LMNA-205ENST00000368299 ATP5J2-PTCD1G3V325 749 aa21.25■□□□□ 0.99
LMNA-205ENST00000368299 A1BGP04217 495 aa21.25■□□□□ 0.99
LMNA-205ENST00000368299 PLCH1Q4KWH8 1693 aa21.24■□□□□ 0.99
LMNA-205ENST00000368299 CASP7P55210 303 aa21.24■□□□□ 0.99
LMNA-205ENST00000368299 CWC25Q9NXE8 425 aaPredicted RBP21.24■□□□□ 0.99
LMNA-205ENST00000368299 SGSM2O43147 1006 aa21.23■□□□□ 0.99
LMNA-205ENST00000368299 MAP4K4O95819 1239 aaPredicted RBP21.23■□□□□ 0.99
LMNA-205ENST00000368299 TTLL7Q6ZT98 887 aa21.23■□□□□ 0.99
LMNA-205ENST00000368299 NUP188Q5SRE5 1749 aa21.23■□□□□ 0.99
LMNA-205ENST00000368299 H7C1W4 665 aa21.22■□□□□ 0.99
LMNA-205ENST00000368299 RUFY2Q8WXA3 655 aa21.22■□□□□ 0.99
LMNA-205ENST00000368299 MCM4P33991 863 aa21.22■□□□□ 0.99
LMNA-205ENST00000368299 MCM2P49736 904 aa21.22■□□□□ 0.99
LMNA-205ENST00000368299 CCDC191Q8NCU4 936 aa21.22■□□□□ 0.99
LMNA-205ENST00000368299 PIGBQ92521 554 aa21.22■□□□□ 0.99
LMNA-205ENST00000368299 EAF2Q96CJ1 260 aaPredicted RBP21.22■□□□□ 0.99
LMNA-205ENST00000368299 EVI5LQ96CN4 794 aa21.22■□□□□ 0.99
LMNA-205ENST00000368299 COL16A1Q07092 1604 aaPredicted RBP21.22■□□□□ 0.99
LMNA-205ENST00000368299 RFX5P48382 616 aaPredicted RBP21.21■□□□□ 0.99
LMNA-205ENST00000368299 SIL1Q9H173 461 aa21.21■□□□□ 0.99
LMNA-205ENST00000368299 LRP6O75581 1613 aa21.21■□□□□ 0.99
LMNA-205ENST00000368299 LTBP4Q8N2S1 1624 aa21.21■□□□□ 0.99
LMNA-205ENST00000368299 EXOC5O00471 708 aa21.2■□□□□ 0.98
LMNA-205ENST00000368299 PTPN12Q05209 780 aaKnown RBP21.2■□□□□ 0.98
LMNA-205ENST00000368299 RAB3GAP1Q15042 981 aa21.2■□□□□ 0.98
LMNA-205ENST00000368299 CDCA7Q9BWT1 371 aaPredicted RBP21.2■□□□□ 0.98
LMNA-205ENST00000368299 STARD3NLO95772 234 aa21.2■□□□□ 0.98
LMNA-205ENST00000368299 DIAPH3Q9NSV4 1193 aa21.2■□□□□ 0.98
LMNA-205ENST00000368299 HIP1O00291 1037 aa21.19■□□□□ 0.98
LMNA-205ENST00000368299 HSPA4P34932 840 aa21.19■□□□□ 0.98
LMNA-205ENST00000368299 KLHDC4Q8TBB5 520 aa21.19■□□□□ 0.98
LMNA-205ENST00000368299 RAD50Q92878 1312 aa21.19■□□□□ 0.98
LMNA-205ENST00000368299 KIAA1211Q6ZU35 1233 aa21.18■□□□□ 0.98
LMNA-205ENST00000368299 CWC22Q9HCG8 908 aaKnown RBP21.18■□□□□ 0.98
LMNA-205ENST00000368299 RTN4Q9NQC3 1192 aaKnown RBP21.18■□□□□ 0.98
LMNA-205ENST00000368299 ATG3Q9NT62 314 aa21.18■□□□□ 0.98
LMNA-205ENST00000368299 ASAP1Q9ULH1 1129 aa21.18■□□□□ 0.98
LMNA-205ENST00000368299 NEK4P51957 841 aa21.18■□□□□ 0.98
LMNA-205ENST00000368299 JARID2Q92833 1246 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms