RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 TRAK2O60296 914 aa12.32□□□□□ -0.44
CACNA1S-201ENST00000362061 SSRP1Q08945 709 aaKnown RBP12.32□□□□□ -0.44
CACNA1S-201ENST00000362061 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
CACNA1S-201ENST00000362061 ZGPATQ8N5A5 531 aaKnown RBP12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 UTP14AQ9BVJ6 771 aaKnown RBP12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 CUL7Q14999 1698 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 PTPRCP08575 1304 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 PHAXQ9H814 394 aaKnown RBP12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 FANCIQ9NVI1 1328 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 TSG101Q99816 390 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 DZIP3Q86Y13 1208 aaKnown RBP12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 ZNF804AQ7Z570 1209 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 CCDC83Q8IWF9 413 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 PIK3R4Q99570 1358 aa12.31□□□□□ -0.44
CACNA1S-201ENST00000362061 PICALMQ13492 652 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 STX8Q9UNK0 236 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 FBLN1P23142 703 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 MFSD6Q6ZSS7 791 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 FERMT3Q86UX7 667 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 WDR7Q9Y4E6 1490 aa12.3□□□□□ -0.44
CACNA1S-201ENST00000362061 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 CETN2P41208 172 aa12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 NSD2O96028 1365 aa12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 UPF3BQ9BZI7 483 aaKnown RBP12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 SCAF11Q99590 1463 aaKnown RBP12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 TMEM67Q5HYA8 995 aa12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 RARSP54136 660 aaKnown RBP12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 BIN2Q9UBW5 565 aaPredicted RBP12.29□□□□□ -0.44
CACNA1S-201ENST00000362061 GNPATO15228 680 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 EVI5LQ96CN4 794 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 EYA3Q99504 573 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 CYP7A1P22680 504 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 GUCY1B3Q02153 619 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 ZNF771Q7L3S4 317 aaPredicted RBP12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 NUP62CLQ9H1M0 184 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 KIF20AO95235 890 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 MRE11P49959 708 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 CKAP2LQ8IYA6 745 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 HAND2P61296 217 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 GJA3Q9Y6H8 435 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 PCF11O94913 1555 aaKnown RBP12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 PLS1Q14651 629 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 CCDC144CPQ8IYA2 1237 aa12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 ZNF397Q8NF99 534 aaPredicted RBP12.28□□□□□ -0.44
CACNA1S-201ENST00000362061 MBIPQ9NS73 344 aa12.27□□□□□ -0.44
CACNA1S-201ENST00000362061 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
CACNA1S-201ENST00000362061 PPIP5K1Q6PFW1 1433 aa12.27□□□□□ -0.45
CACNA1S-201ENST00000362061 PTPN23Q9H3S7 1636 aa12.27□□□□□ -0.45
CACNA1S-201ENST00000362061 SMTNL1A8MU46 457 aa12.27□□□□□ -0.45
CACNA1S-201ENST00000362061 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.45
CACNA1S-201ENST00000362061 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 KLHL10Q6JEL2 608 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 TAF4BQ92750 862 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 A2MP01023 1474 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 TRAF1Q13077 416 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 NAA16Q6N069 864 aaPredicted RBP12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 FKBP15Q5T1M5 1219 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 JAKMIP3Q5VZ66 844 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 CCNL1Q9UK58 526 aaPredicted RBP12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 ANKRD36BQ8N2N9 1353 aa12.26□□□□□ -0.45
CACNA1S-201ENST00000362061 GCP02774 474 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 KCNA6P17658 529 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 GOLGA6L10A6NI86 522 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 IARSP41252 1262 aaKnown RBP12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 ANAPC15P60006 121 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 KIAA1328Q86T90 577 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 CCDC184Q52MB2 194 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 AXDND1Q5T1B0 1012 aaPredicted RBP12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 CACNA2D4Q7Z3S7 1137 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 BEGAINQ9BUH8 593 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 PLCH2O75038 1416 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms