RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 ATF3P18847 181 aa29.37■■■□□ 2.29
CROCCP2-201ENST00000362058 UPF3BQ9BZI7 483 aaKnown RBP29.37■■■□□ 2.29
CROCCP2-201ENST00000362058 LSG1Q9H089 658 aaKnown RBP29.37■■■□□ 2.29
CROCCP2-201ENST00000362058 NLRP2Q9NX02 1062 aa29.37■■■□□ 2.29
CROCCP2-201ENST00000362058 IFIT2P09913 472 aaKnown RBP29.37■■■□□ 2.29
CROCCP2-201ENST00000362058 NCLP19338 710 aaKnown RBP29.37■■■□□ 2.29
CROCCP2-201ENST00000362058 COL18A1P39060 1754 aa29.36■■■□□ 2.29
CROCCP2-201ENST00000362058 PRPF40AO75400 957 aaKnown RBP29.36■■■□□ 2.29
CROCCP2-201ENST00000362058 DIAPH3Q9NSV4 1193 aa29.36■■■□□ 2.29
CROCCP2-201ENST00000362058 DCCP43146 1447 aa29.36■■■□□ 2.29
CROCCP2-201ENST00000362058 PDIA6Q15084 440 aa29.35■■■□□ 2.29
CROCCP2-201ENST00000362058 LARP1Q6PKG0 1096 aaKnown RBP29.35■■■□□ 2.29
CROCCP2-201ENST00000362058 RRAGDQ9NQL2 400 aaPredicted RBP29.35■■■□□ 2.29
CROCCP2-201ENST00000362058 KDM6AO15550 1401 aaPredicted RBP29.35■■■□□ 2.29
CROCCP2-201ENST00000362058 PHKG2P15735 406 aa29.34■■■□□ 2.29
CROCCP2-201ENST00000362058 CAVIN1Q6NZI2 390 aaKnown RBP29.34■■■□□ 2.29
CROCCP2-201ENST00000362058 SUCLG2Q96I99 432 aa29.34■■■□□ 2.29
CROCCP2-201ENST00000362058 NEXNQ0ZGT2 675 aa29.33■■■□□ 2.29
CROCCP2-201ENST00000362058 AIMP1Q12904 312 aaKnown RBP29.33■■■□□ 2.29
CROCCP2-201ENST00000362058 CWC27Q6UX04 472 aaKnown RBP29.33■■■□□ 2.29
CROCCP2-201ENST00000362058 NOL8Q76FK4 1167 aaKnown RBP29.33■■■□□ 2.29
CROCCP2-201ENST00000362058 RIC3Q7Z5B4 369 aa29.33■■■□□ 2.29
CROCCP2-201ENST00000362058 SNX14Q9Y5W7 946 aa29.33■■■□□ 2.29
CROCCP2-201ENST00000362058 G3BP1Q13283 466 aaKnown RBP eCLIP29.33■■■□□ 2.29
CROCCP2-201ENST00000362058 IFNL2Q8IZJ0 200 aa29.32■■■□□ 2.28
CROCCP2-201ENST00000362058 PA2G4Q9UQ80 394 aaKnown RBP29.32■■■□□ 2.28
CROCCP2-201ENST00000362058 ZSCAN23Q3MJ62 389 aa29.32■■■□□ 2.28
CROCCP2-201ENST00000362058 AACSQ86V21 672 aa29.31■■■□□ 2.28
CROCCP2-201ENST00000362058 EVI5LQ96CN4 794 aa29.31■■■□□ 2.28
CROCCP2-201ENST00000362058 BICC1Q9H694 974 aaKnown RBP29.31■■■□□ 2.28
CROCCP2-201ENST00000362058 ANP32BQ92688 251 aaKnown RBP29.3■■■□□ 2.28
CROCCP2-201ENST00000362058 MBD3O95983 291 aa29.3■■■□□ 2.28
CROCCP2-201ENST00000362058 NASPP49321 788 aaPredicted RBP29.3■■■□□ 2.28
CROCCP2-201ENST00000362058 SLC39A6Q13433 755 aa29.3■■■□□ 2.28
CROCCP2-201ENST00000362058 MEGF6O75095 1541 aa29.29■■■□□ 2.28
CROCCP2-201ENST00000362058 MRC1P22897 1456 aa29.29■■■□□ 2.28
CROCCP2-201ENST00000362058 TRIM44Q96DX7 344 aaPredicted RBP29.29■■■□□ 2.28
CROCCP2-201ENST00000362058 KAZALD1Q96I82 304 aa29.29■■■□□ 2.28
CROCCP2-201ENST00000362058 PKD1L3Q7Z443 1732 aa29.29■■■□□ 2.28
CROCCP2-201ENST00000362058 HIP1O00291 1037 aa29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 NFATC2IPQ8NCF5 419 aa29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 GPT2Q8TD30 523 aa29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 IGKV5-2P06315 115 aa29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 CSB-PGBD3P0DP91 1061 aa29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 CCDC173Q0VFZ6 552 aa29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 TTC14Q96N46 770 aa29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 WDR33Q9C0J8 1336 aaKnown RBP29.28■■■□□ 2.28
CROCCP2-201ENST00000362058 TMEM94Q12767 1356 aa29.27■■■□□ 2.28
CROCCP2-201ENST00000362058 FOXD4L5Q5VV16 416 aaPredicted RBP29.27■■■□□ 2.28
CROCCP2-201ENST00000362058 FOXD4L4Q8WXT5 416 aaPredicted RBP29.27■■■□□ 2.28
CROCCP2-201ENST00000362058 DCAF5Q96JK2 942 aa29.27■■■□□ 2.28
CROCCP2-201ENST00000362058 NEURL1BA8MQ27 555 aa29.26■■■□□ 2.27
CROCCP2-201ENST00000362058 METTL22Q9BUU2 404 aaPredicted RBP29.26■■■□□ 2.27
CROCCP2-201ENST00000362058 TNS3Q68CZ2 1445 aa29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 SNRPA1P09661 255 aaKnown RBP29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 RASEFQ8IZ41 740 aa29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 TTC5Q8N0Z6 440 aa29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 XAGE3Q8WTP9 111 aa29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 AFDNP55196 1824 aaKnown RBP29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 SASH1O94885 1247 aa29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 MYL6BP14649 208 aa29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 LIMCH1Q9UPQ0 1083 aa29.25■■■□□ 2.27
CROCCP2-201ENST00000362058 STRCP1A6NGW2 1772 aa29.24■■■□□ 2.27
CROCCP2-201ENST00000362058 GCKRQ14397 625 aa29.24■■■□□ 2.27
CROCCP2-201ENST00000362058 CLCN1P35523 988 aa29.23■■■□□ 2.27
CROCCP2-201ENST00000362058 COPS6Q7L5N1 327 aa29.23■■■□□ 2.27
CROCCP2-201ENST00000362058 ZNF496Q96IT1 587 aaPredicted RBP29.23■■■□□ 2.27
CROCCP2-201ENST00000362058 AK2P54819 239 aa29.23■■■□□ 2.27
CROCCP2-201ENST00000362058 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.23■■■□□ 2.27
CROCCP2-201ENST00000362058 KCNB2Q92953 911 aa29.22■■■□□ 2.27
CROCCP2-201ENST00000362058 EAF2Q96CJ1 260 aaPredicted RBP29.22■■■□□ 2.27
CROCCP2-201ENST00000362058 PPP1R9BQ96SB3 815 aa29.22■■■□□ 2.27
CROCCP2-201ENST00000362058 CADPS2Q86UW7 1296 aa29.21■■■□□ 2.27
CROCCP2-201ENST00000362058 FMNL2Q96PY5 1086 aa29.21■■■□□ 2.27
CROCCP2-201ENST00000362058 MYD88Q99836 296 aa29.21■■■□□ 2.27
CROCCP2-201ENST00000362058 TM6SF1Q9BZW5 370 aa29.21■■■□□ 2.27
CROCCP2-201ENST00000362058 ANKRD13DQ6ZTN6 518 aa29.21■■■□□ 2.27
CROCCP2-201ENST00000362058 LAMB4A4D0S4 1761 aa29.21■■■□□ 2.27
CROCCP2-201ENST00000362058 PARP4Q9UKK3 1724 aaKnown RBP29.2■■■□□ 2.27
CROCCP2-201ENST00000362058 CASTP20810 708 aaKnown RBP29.2■■■□□ 2.27
CROCCP2-201ENST00000362058 DDX17Q92841 729 aaKnown RBP29.2■■■□□ 2.26
CROCCP2-201ENST00000362058 CCDC171Q6TFL3 1326 aa29.19■■■□□ 2.26
CROCCP2-201ENST00000362058 ESPNB1AK53 854 aa29.19■■■□□ 2.26
CROCCP2-201ENST00000362058 PTH1RQ03431 593 aa29.19■■■□□ 2.26
CROCCP2-201ENST00000362058 ARFGEF2Q9Y6D5 1785 aa29.19■■■□□ 2.26
CROCCP2-201ENST00000362058 VPS53Q5VIR6 699 aa29.18■■■□□ 2.26
CROCCP2-201ENST00000362058 RUFY3Q7L099 469 aa29.18■■■□□ 2.26
CROCCP2-201ENST00000362058 CHAMP1Q96JM3 812 aa29.18■■■□□ 2.26
CROCCP2-201ENST00000362058 RBM27Q9P2N5 1060 aaKnown RBP29.18■■■□□ 2.26
CROCCP2-201ENST00000362058 CYP27B1O15528 508 aa29.18■■■□□ 2.26
CROCCP2-201ENST00000362058 CCDC8Q9H0W5 538 aaPredicted RBP29.18■■■□□ 2.26
CROCCP2-201ENST00000362058 CPDO75976 1380 aa29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 ZKSCAN1P17029 563 aaPredicted RBP29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 PRPF40BQ6NWY9 871 aaKnown RBP29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 LRSAM1Q6UWE0 723 aa29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 SYAP1Q96A49 352 aaPredicted RBP29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 ZSCAN31Q96LW9 406 aaPredicted RBP29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 SIL1Q9H173 461 aa29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 TMEM63CQ9P1W3 806 aa29.17■■■□□ 2.26
CROCCP2-201ENST00000362058 CYP46A1Q9Y6A2 500 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms