RNA–Protein interactions for RNA: ENST00000361548.8

GRHL3-204, Transcript of grainyhead like transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRHL3, Length 2,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRHL3-204ENST00000361548 TRIM5Q9C035 493 aa12.6□□□□□ -0.39
GRHL3-204ENST00000361548 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
GRHL3-204ENST00000361548 DACT1Q9NYF0 836 aa12.6□□□□□ -0.39
GRHL3-204ENST00000361548 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
GRHL3-204ENST00000361548 ALKQ9UM73 1620 aa12.6□□□□□ -0.39
GRHL3-204ENST00000361548 ME3Q16798 604 aa12.59□□□□□ -0.39
GRHL3-204ENST00000361548 COG3Q96JB2 828 aa12.59□□□□□ -0.39
GRHL3-204ENST00000361548 TFIP11Q9UBB9 837 aaKnown RBP12.59□□□□□ -0.39
GRHL3-204ENST00000361548 ATP6V1DQ9Y5K8 247 aa12.59□□□□□ -0.39
GRHL3-204ENST00000361548 EDC4Q6P2E9 1401 aaKnown RBP12.59□□□□□ -0.39
GRHL3-204ENST00000361548 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
GRHL3-204ENST00000361548 FAM53CQ9NYF3 392 aa12.59□□□□□ -0.39
GRHL3-204ENST00000361548 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
GRHL3-204ENST00000361548 TAF3Q5VWG9 929 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 CEP135Q66GS9 1140 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 JAKMIP1Q96N16 626 aaKnown RBP12.58□□□□□ -0.4
GRHL3-204ENST00000361548 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 DNAJC25Q9H1X3 360 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 TMEM131LA2VDJ0 1609 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 ERICH4A6NGS2 130 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
GRHL3-204ENST00000361548 FBXO38Q6PIJ6 1188 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 PDRG1Q9NUG6 133 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 TSPYL4Q9UJ04 414 aa12.58□□□□□ -0.4
GRHL3-204ENST00000361548 FLIIQ13045 1269 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 TDRD7Q8NHU6 1098 aaKnown RBP12.57□□□□□ -0.4
GRHL3-204ENST00000361548 TNMDQ9H2S6 317 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 ZNF446Q9NWS9 450 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 PAXBP1Q9Y5B6 917 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 DIP2CQ9Y2E4 1556 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 PDE4CQ08493 712 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
GRHL3-204ENST00000361548 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
GRHL3-204ENST00000361548 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 TPCN1Q9ULQ1 816 aa12.57□□□□□ -0.4
GRHL3-204ENST00000361548 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
GRHL3-204ENST00000361548 A0A087WWV3 80 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 ELF2Q15723 593 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 KRT222Q8N1A0 295 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 AOX1Q06278 1338 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 RIMS1Q86UR5 1692 aaKnown RBP12.56□□□□□ -0.4
GRHL3-204ENST00000361548 XRN1Q8IZH2 1706 aaKnown RBP12.56□□□□□ -0.4
GRHL3-204ENST00000361548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
GRHL3-204ENST00000361548 NPHP1O15259 732 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 EPB41L2O43491 1005 aaKnown RBP12.56□□□□□ -0.4
GRHL3-204ENST00000361548 NR1I2O75469 434 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 GNAI3P08754 354 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 LARP1BQ659C4 914 aaKnown RBP12.56□□□□□ -0.4
GRHL3-204ENST00000361548 LRRN4CLQ8ND94 238 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 ZNF397Q8NF99 534 aaPredicted RBP12.56□□□□□ -0.4
GRHL3-204ENST00000361548 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
GRHL3-204ENST00000361548 SURF6O75683 361 aaKnown RBP12.55□□□□□ -0.4
GRHL3-204ENST00000361548 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 MTHFSDQ2M296 383 aaKnown RBP12.55□□□□□ -0.4
GRHL3-204ENST00000361548 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
GRHL3-204ENST00000361548 LRRC8AQ8IWT6 810 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 SSH3Q8TE77 659 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 SLC52A1Q9NWF4 448 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
GRHL3-204ENST00000361548 CAPN2P17655 700 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 ZNF165P49910 485 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 KRT85P78386 507 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
GRHL3-204ENST00000361548 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 CLSTN2Q9H4D0 955 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
GRHL3-204ENST00000361548 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
GRHL3-204ENST00000361548 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
GRHL3-204ENST00000361548 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
GRHL3-204ENST00000361548 C11orf57Q6ZUT1 292 aaPredicted RBP12.54□□□□□ -0.4
GRHL3-204ENST00000361548 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
GRHL3-204ENST00000361548 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
GRHL3-204ENST00000361548 TRERF1Q96PN7 1200 aa12.54□□□□□ -0.4
GRHL3-204ENST00000361548 NRKQ7Z2Y5 1582 aa12.53□□□□□ -0.4
GRHL3-204ENST00000361548 SOX12O15370 315 aa12.53□□□□□ -0.4
GRHL3-204ENST00000361548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
GRHL3-204ENST00000361548 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
GRHL3-204ENST00000361548 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
GRHL3-204ENST00000361548 ELP1O95163 1332 aa12.53□□□□□ -0.4
GRHL3-204ENST00000361548 IQCB1Q15051 598 aa12.53□□□□□ -0.4
GRHL3-204ENST00000361548 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
GRHL3-204ENST00000361548 CYP46A1Q9Y6A2 500 aa12.52□□□□□ -0.4
GRHL3-204ENST00000361548 MAP3K19Q56UN5 1328 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.41
GRHL3-204ENST00000361548 CCZ1BP86790 482 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 CCZ1P86791 482 aaPredicted RBP12.52□□□□□ -0.41
GRHL3-204ENST00000361548 POLA2Q14181 598 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 CNTROBQ8N137 903 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 SPATA32Q96LK8 384 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 PEAK1Q9H792 1746 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 SKILP12757 684 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 PTPN14Q15678 1187 aa12.52□□□□□ -0.41
GRHL3-204ENST00000361548 ZSCAN31Q96LW9 406 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms