RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CHPF2Q9P2E5 772 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 PARP3Q9Y6F1 533 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 POTEJP0CG39 1038 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 GOLGA6L10A6NI86 522 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 MICU3Q86XE3 530 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 POLD1P28340 1107 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 C20orf194Q5TEA3 1177 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 CCDC194A0A1B0GVG4 234 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 CCDC152Q4G0S7 254 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 CPLX3Q8WVH0 158 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 CCDC150Q8NCX0 1101 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 ZRANB1Q9UGI0 708 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 TSG101Q99816 390 aa23.6■■□□□ 1.37
CDC42BPB-201ENST00000361246 PTPN23Q9H3S7 1636 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 ERCC4Q92889 916 aaPredicted RBP23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 BAG3O95817 575 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 GBP2P32456 591 aaPredicted RBP23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 FLIIQ13045 1269 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 SYCP3Q8IZU3 236 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 SIRT1Q96EB6 747 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 ABCC5O15440 1437 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 ANKRD18AQ8IVF6 992 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 FERMT2Q96AC1 680 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 EHMT1Q9H9B1 1298 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 FANCAO15360 1455 aa23.59■■□□□ 1.37
CDC42BPB-201ENST00000361246 SLFN5Q08AF3 891 aa23.58■■□□□ 1.37
CDC42BPB-201ENST00000361246 TMEM266Q2M3C6 531 aa23.58■■□□□ 1.37
CDC42BPB-201ENST00000361246 CACNA2D4Q7Z3S7 1137 aa23.58■■□□□ 1.37
CDC42BPB-201ENST00000361246 RPAP2Q8IXW5 612 aaPredicted RBP23.58■■□□□ 1.37
CDC42BPB-201ENST00000361246 TOP2BQ02880 1626 aa23.58■■□□□ 1.37
CDC42BPB-201ENST00000361246 FANCIQ9NVI1 1328 aa23.58■■□□□ 1.37
CDC42BPB-201ENST00000361246 TSPY3P0CV98 308 aa23.58■■□□□ 1.36
CDC42BPB-201ENST00000361246 TSPY8P0CW00 308 aa23.58■■□□□ 1.36
CDC42BPB-201ENST00000361246 TCERG1LQ5VWI1 586 aa23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 HELBQ8NG08 1087 aaPredicted RBP23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 ZNF354CQ86Y25 554 aa23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 MAP3K9P80192 1104 aa23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 OGFOD1Q8N543 542 aa23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 ZSCAN31Q96LW9 406 aaPredicted RBP23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 CCDC113Q9H0I3 377 aa23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 GOPCQ9HD26 462 aa23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 LRRC2Q9BYS8 371 aa23.57■■□□□ 1.36
CDC42BPB-201ENST00000361246 EPB41L2O43491 1005 aaKnown RBP23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 CYP7A1P22680 504 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 DPH6Q7L8W6 267 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 ZNF397Q8NF99 534 aaPredicted RBP23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 SLC26A6Q9BXS9 759 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 SP4Q02446 784 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 CBFA2T2O43439 604 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 BAG4O95429 457 aaKnown RBP23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 HMGB2P26583 209 aaKnown RBP23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 SNRPA1P09661 255 aaKnown RBP23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 MRE11P49959 708 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 CCDC24Q8N4L8 307 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 RSPH6AQ9H0K4 717 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 HDAC9Q9UKV0 1011 aa23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
CDC42BPB-201ENST00000361246 CCDC178Q5BJE1 867 aa23.55■■□□□ 1.36
CDC42BPB-201ENST00000361246 PRKG1Q13976 671 aa23.55■■□□□ 1.36
CDC42BPB-201ENST00000361246 TNRQ92752 1358 aa23.55■■□□□ 1.36
CDC42BPB-201ENST00000361246 BIN1O00499 593 aa23.55■■□□□ 1.36
CDC42BPB-201ENST00000361246 MFSD6Q6ZSS7 791 aa23.55■■□□□ 1.36
CDC42BPB-201ENST00000361246 XAGE3Q8WTP9 111 aa23.55■■□□□ 1.36
CDC42BPB-201ENST00000361246 ZBTB21Q9ULJ3 1066 aa23.55■■□□□ 1.36
CDC42BPB-201ENST00000361246 IDEP14735 1019 aa23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 PDE4BQ07343 736 aa23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 ZRSR2Q15696 482 aaKnown RBP23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 TAF4BQ92750 862 aa23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 KIF20AO95235 890 aa23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 FAM212AQ96EL1 285 aa23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 JAKMIP3Q5VZ66 844 aa23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 CCP110O43303 1012 aa23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 DDX17Q92841 729 aaKnown RBP23.54■■□□□ 1.36
CDC42BPB-201ENST00000361246 PRKCSHP14314 528 aaPredicted RBP23.53■■□□□ 1.36
CDC42BPB-201ENST00000361246 AKNAD1Q5T1N1 836 aa23.53■■□□□ 1.36
CDC42BPB-201ENST00000361246 ANKRD13DQ6ZTN6 518 aa23.53■■□□□ 1.36
CDC42BPB-201ENST00000361246 SYCE3A1L190 88 aa23.53■■□□□ 1.36
CDC42BPB-201ENST00000361246 COMMD10Q9Y6G5 202 aa23.53■■□□□ 1.36
CDC42BPB-201ENST00000361246 NBPF14Q5TI25 921 aa23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 COPS6Q7L5N1 327 aa23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 SLC4A4Q9Y6R1 1079 aa23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 NSFL1CQ9UNZ2 370 aaKnown RBP23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 RTCBQ9Y3I0 505 aaKnown RBP23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 HEATR3Q7Z4Q2 680 aa23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 DZIP3Q86Y13 1208 aaKnown RBP23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 SBNO2Q9Y2G9 1366 aa23.52■■□□□ 1.36
CDC42BPB-201ENST00000361246 MBIPQ9NS73 344 aa23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 TFIP11Q9UBB9 837 aaKnown RBP23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 NFATC2IPQ8NCF5 419 aa23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 NLRP3Q96P20 1036 aa23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 BTG4Q9NY30 223 aa23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 CCDC196A0A1B0GTZ2 297 aa23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 TEX13AQ9BXU3 409 aaPredicted RBP23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 CRNKL1Q9BZJ0 848 aaKnown RBP23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 DNAI2Q9GZS0 605 aa23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 CCDC112Q8NEF3 446 aa23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 RNF41Q9H4P4 317 aaPredicted RBP23.51■■□□□ 1.35
CDC42BPB-201ENST00000361246 TERF1P54274 439 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms