RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 PHKG2P15735 406 aa32.01■■■□□ 2.71
CUEDC1-201ENST00000360238 MCTP1Q6DN14 999 aa32.01■■■□□ 2.71
CUEDC1-201ENST00000360238 ZDHHC9Q9Y397 364 aa32.01■■■□□ 2.71
CUEDC1-201ENST00000360238 TNS3Q68CZ2 1445 aa32.01■■■□□ 2.71
CUEDC1-201ENST00000360238 MAP4K4O95819 1239 aaPredicted RBP32■■■□□ 2.71
CUEDC1-201ENST00000360238 GPATCH3Q96I76 525 aa31.98■■■□□ 2.71
CUEDC1-201ENST00000360238 LMBRD1Q9NUN5 540 aa31.98■■■□□ 2.71
CUEDC1-201ENST00000360238 PARP4Q9UKK3 1724 aaKnown RBP31.97■■■□□ 2.71
CUEDC1-201ENST00000360238 GAS2L3Q86XJ1 694 aa31.96■■■□□ 2.71
CUEDC1-201ENST00000360238 IFNL2Q8IZJ0 200 aa31.96■■■□□ 2.71
CUEDC1-201ENST00000360238 ECHDC1Q9NTX5 307 aa31.96■■■□□ 2.71
CUEDC1-201ENST00000360238 LSG1Q9H089 658 aaKnown RBP31.95■■■□□ 2.71
CUEDC1-201ENST00000360238 LARP1Q6PKG0 1096 aaKnown RBP31.95■■■□□ 2.7
CUEDC1-201ENST00000360238 SUCLG2Q96I99 432 aa31.95■■■□□ 2.7
CUEDC1-201ENST00000360238 LAMB4A4D0S4 1761 aa31.94■■■□□ 2.7
CUEDC1-201ENST00000360238 SLC39A6Q13433 755 aa31.94■■■□□ 2.7
CUEDC1-201ENST00000360238 KAZALD1Q96I82 304 aa31.94■■■□□ 2.7
CUEDC1-201ENST00000360238 IFIT2P09913 472 aaKnown RBP31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 AIMP1Q12904 312 aaKnown RBP31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 UPF3BQ9BZI7 483 aaKnown RBP31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 PA2G4Q9UQ80 394 aaKnown RBP31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 KIAA1211Q6ZU35 1233 aa31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 RIC3Q7Z5B4 369 aa31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 CADPS2Q86UW7 1296 aa31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 RUFY2Q8WXA3 655 aa31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 BICC1Q9H694 974 aaKnown RBP31.92■■■□□ 2.7
CUEDC1-201ENST00000360238 NEXNQ0ZGT2 675 aa31.91■■■□□ 2.7
CUEDC1-201ENST00000360238 NFATC2IPQ8NCF5 419 aa31.91■■■□□ 2.7
CUEDC1-201ENST00000360238 CPDO75976 1380 aa31.91■■■□□ 2.7
CUEDC1-201ENST00000360238 BRD1O95696 1058 aa31.91■■■□□ 2.7
CUEDC1-201ENST00000360238 IGKV5-2P06315 115 aa31.91■■■□□ 2.7
CUEDC1-201ENST00000360238 DCAF5Q96JK2 942 aa31.91■■■□□ 2.7
CUEDC1-201ENST00000360238 AFDNP55196 1824 aaKnown RBP31.9■■■□□ 2.7
CUEDC1-201ENST00000360238 CSB-PGBD3P0DP91 1061 aa31.9■■■□□ 2.7
CUEDC1-201ENST00000360238 DDX17Q92841 729 aaKnown RBP31.9■■■□□ 2.7
CUEDC1-201ENST00000360238 DIAPH3Q9NSV4 1193 aa31.9■■■□□ 2.7
CUEDC1-201ENST00000360238 SNX14Q9Y5W7 946 aa31.9■■■□□ 2.7
CUEDC1-201ENST00000360238 CWC27Q6UX04 472 aaKnown RBP31.89■■■□□ 2.7
CUEDC1-201ENST00000360238 ARFGEF2Q9Y6D5 1785 aa31.88■■■□□ 2.69
CUEDC1-201ENST00000360238 NEURL1BA8MQ27 555 aa31.88■■■□□ 2.69
CUEDC1-201ENST00000360238 ZNF445P59923 1031 aa31.88■■■□□ 2.69
CUEDC1-201ENST00000360238 AACSQ86V21 672 aa31.88■■■□□ 2.69
CUEDC1-201ENST00000360238 ZNF496Q96IT1 587 aaPredicted RBP31.88■■■□□ 2.69
CUEDC1-201ENST00000360238 GLI3P10071 1580 aa31.88■■■□□ 2.69
CUEDC1-201ENST00000360238 G3BP1Q13283 466 aaKnown RBP eCLIP31.87■■■□□ 2.69
CUEDC1-201ENST00000360238 XAGE3Q8WTP9 111 aa31.87■■■□□ 2.69
CUEDC1-201ENST00000360238 EVI5LQ96CN4 794 aa31.87■■■□□ 2.69
CUEDC1-201ENST00000360238 METTL22Q9BUU2 404 aaPredicted RBP31.87■■■□□ 2.69
CUEDC1-201ENST00000360238 SNRPA1P09661 255 aaKnown RBP31.86■■■□□ 2.69
CUEDC1-201ENST00000360238 TTC5Q8N0Z6 440 aa31.86■■■□□ 2.69
CUEDC1-201ENST00000360238 SPATA31A3Q5VYP0 1347 aa31.86■■■□□ 2.69
CUEDC1-201ENST00000360238 SASH1O94885 1247 aa31.85■■■□□ 2.69
CUEDC1-201ENST00000360238 MYL6BP14649 208 aa31.85■■■□□ 2.69
CUEDC1-201ENST00000360238 GCKRQ14397 625 aa31.85■■■□□ 2.69
CUEDC1-201ENST00000360238 NOL8Q76FK4 1167 aaKnown RBP31.85■■■□□ 2.69
CUEDC1-201ENST00000360238 TTC14Q96N46 770 aa31.85■■■□□ 2.69
CUEDC1-201ENST00000360238 CYP27B1O15528 508 aa31.84■■■□□ 2.69
CUEDC1-201ENST00000360238 LRP10Q7Z4F1 713 aa31.84■■■□□ 2.69
CUEDC1-201ENST00000360238 PRPF40AO75400 957 aaKnown RBP31.84■■■□□ 2.69
CUEDC1-201ENST00000360238 COPS6Q7L5N1 327 aa31.84■■■□□ 2.69
CUEDC1-201ENST00000360238 CABLES1Q8TDN4 633 aa31.84■■■□□ 2.69
CUEDC1-201ENST00000360238 XIRP1Q702N8 1843 aaKnown RBP31.83■■■□□ 2.69
CUEDC1-201ENST00000360238 CAVIN1Q6NZI2 390 aaKnown RBP31.83■■■□□ 2.69
CUEDC1-201ENST00000360238 FMNL2Q96PY5 1086 aa31.83■■■□□ 2.69
CUEDC1-201ENST00000360238 COL15A1P39059 1388 aa31.82■■■□□ 2.68
CUEDC1-201ENST00000360238 HIP1O00291 1037 aa31.82■■■□□ 2.68
CUEDC1-201ENST00000360238 CHRNA2Q15822 529 aa31.81■■■□□ 2.68
CUEDC1-201ENST00000360238 ZSCAN23Q3MJ62 389 aa31.81■■■□□ 2.68
CUEDC1-201ENST00000360238 RASEFQ8IZ41 740 aa31.81■■■□□ 2.68
CUEDC1-201ENST00000360238 MYD88Q99836 296 aa31.81■■■□□ 2.68
CUEDC1-201ENST00000360238 EAF2Q96CJ1 260 aaPredicted RBP31.81■■■□□ 2.68
CUEDC1-201ENST00000360238 ANKRD13DQ6ZTN6 518 aa31.8■■■□□ 2.68
CUEDC1-201ENST00000360238 GPT2Q8TD30 523 aa31.8■■■□□ 2.68
CUEDC1-201ENST00000360238 NCLP19338 710 aaKnown RBP31.8■■■□□ 2.68
CUEDC1-201ENST00000360238 KCNB2Q92953 911 aa31.8■■■□□ 2.68
CUEDC1-201ENST00000360238 RRAGDQ9NQL2 400 aaPredicted RBP31.8■■■□□ 2.68
CUEDC1-201ENST00000360238 USP16Q9Y5T5 823 aa31.78■■■□□ 2.68
CUEDC1-201ENST00000360238 MBD3O95983 291 aa31.78■■■□□ 2.68
CUEDC1-201ENST00000360238 WDR33Q9C0J8 1336 aaKnown RBP31.78■■■□□ 2.68
CUEDC1-201ENST00000360238 UBR2Q8IWV8 1755 aa31.77■■■□□ 2.68
CUEDC1-201ENST00000360238 AK2P54819 239 aa31.77■■■□□ 2.68
CUEDC1-201ENST00000360238 SNRKQ9NRH2 765 aa31.77■■■□□ 2.68
CUEDC1-201ENST00000360238 LIMCH1Q9UPQ0 1083 aa31.77■■■□□ 2.68
CUEDC1-201ENST00000360238 TM6SF1Q9BZW5 370 aa31.76■■■□□ 2.67
CUEDC1-201ENST00000360238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.76■■■□□ 2.67
CUEDC1-201ENST00000360238 CCDC171Q6TFL3 1326 aa31.76■■■□□ 2.67
CUEDC1-201ENST00000360238 NASPP49321 788 aaPredicted RBP31.75■■■□□ 2.67
CUEDC1-201ENST00000360238 CABP4P57796 275 aa31.75■■■□□ 2.67
CUEDC1-201ENST00000360238 PTH1RQ03431 593 aa31.75■■■□□ 2.67
CUEDC1-201ENST00000360238 FOXD4L5Q5VV16 416 aaPredicted RBP31.75■■■□□ 2.67
CUEDC1-201ENST00000360238 FOXD4L4Q8WXT5 416 aaPredicted RBP31.75■■■□□ 2.67
CUEDC1-201ENST00000360238 COPRSQ9NQ92 184 aa31.75■■■□□ 2.67
CUEDC1-201ENST00000360238 EPHA10Q5JZY3 1008 aa31.74■■■□□ 2.67
CUEDC1-201ENST00000360238 CCDC8Q9H0W5 538 aaPredicted RBP31.74■■■□□ 2.67
CUEDC1-201ENST00000360238 SIL1Q9H173 461 aa31.74■■■□□ 2.67
CUEDC1-201ENST00000360238 ERBB4Q15303 1308 aa31.74■■■□□ 2.67
CUEDC1-201ENST00000360238 RPAP1Q9BWH6 1393 aaPredicted RBP31.73■■■□□ 2.67
CUEDC1-201ENST00000360238 CASTP20810 708 aaKnown RBP31.73■■■□□ 2.67
CUEDC1-201ENST00000360238 RUFY3Q7L099 469 aa31.73■■■□□ 2.67
CUEDC1-201ENST00000360238 TLR7Q9NYK1 1049 aaKnown RBP31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms