RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 TRIM66O15016 1216 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 CCZ1BP86790 482 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 CCZ1P86791 482 aaPredicted RBP9.07□□□□□ -0.96
CCR9-201ENST00000355983 MCTP2Q6DN12 878 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 NRBP1Q9UHY1 535 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 LCMT1Q9UIC8 334 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 HECW2Q9P2P5 1572 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 CCDC196A0A1B0GTZ2 297 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 EFCAB8A8MWE9 144 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 SYT1P21579 422 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 CT47A1Q5JQC4 288 aaPredicted RBP9.06□□□□□ -0.96
CCR9-201ENST00000355983 ILDR1Q86SU0 546 aaPredicted RBP9.06□□□□□ -0.96
CCR9-201ENST00000355983 ZNF592Q92610 1267 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 OSBPL5Q9H0X9 879 aaPredicted RBP9.06□□□□□ -0.96
CCR9-201ENST00000355983 PNPLA6Q8IY17 1366 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 KIAA0232Q92628 1395 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 AOX1Q06278 1338 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.06□□□□□ -0.96
CCR9-201ENST00000355983 SKILP12757 684 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
CCR9-201ENST00000355983 SRPK2P78362 688 aaKnown RBP9.06□□□□□ -0.96
CCR9-201ENST00000355983 ERCC6LQ2NKX8 1250 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 CLSTN2Q9H4D0 955 aa9.06□□□□□ -0.96
CCR9-201ENST00000355983 CDK12Q9NYV4 1490 aaPredicted RBP9.06□□□□□ -0.96
CCR9-201ENST00000355983 ZCCHC11Q5TAX3 1644 aaKnown RBP9.05□□□□□ -0.96
CCR9-201ENST00000355983 CPSF1Q10570 1443 aaKnown RBP9.05□□□□□ -0.96
CCR9-201ENST00000355983 SALL3Q9BXA9 1300 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 MYCNP04198 464 aaPredicted RBP9.05□□□□□ -0.96
CCR9-201ENST00000355983 CORO7P57737 925 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 CCDC144BQ3MJ40 725 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 ARHGAP29Q52LW3 1261 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 MMS22LQ6ZRQ5 1243 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 LUZP1Q86V48 1076 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 CCDC144CPQ8IYA2 1237 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 UTP14AQ9BVJ6 771 aaKnown RBP9.05□□□□□ -0.96
CCR9-201ENST00000355983 FAM107BQ9H098 131 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 C1orf115Q9H7X2 142 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 TBC1D8O95759 1140 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 OAS2P29728 719 aaKnown RBP9.05□□□□□ -0.96
CCR9-201ENST00000355983 ST5P78524 1137 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 SNW1Q13573 536 aaKnown RBP9.05□□□□□ -0.96
CCR9-201ENST00000355983 PACS2Q86VP3 889 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 TTC14Q96N46 770 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 CXorf56Q9H5V9 222 aa9.05□□□□□ -0.96
CCR9-201ENST00000355983 TTC21AQ8NDW8 1320 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 FRMPD1Q5SYB0 1578 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 MSH6P52701 1360 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 HSPA4P34932 840 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 SMC1AQ14683 1233 aaKnown RBP9.04□□□□□ -0.96
CCR9-201ENST00000355983 ANO6Q4KMQ2 910 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 LEKR1Q6ZMV7 388 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 UBXN4Q92575 508 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 ZSCAN16Q9H4T2 348 aaPredicted RBP9.04□□□□□ -0.96
CCR9-201ENST00000355983 SETD1AO15047 1707 aaKnown RBP9.04□□□□□ -0.96
CCR9-201ENST00000355983 USP27XA6NNY8 438 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 TADA3O75528 432 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 ZNF853P0CG23 659 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 CASTP20810 708 aaKnown RBP9.04□□□□□ -0.96
CCR9-201ENST00000355983 PDE1AP54750 535 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 GYS2P54840 703 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 GNAI1P63096 354 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 GRIPAP1Q4V328 841 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 CEP85Q6P2H3 762 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 EFCAB13Q8IY85 973 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 C16orf71Q8IYS4 520 aaPredicted RBP9.04□□□□□ -0.96
CCR9-201ENST00000355983 GPR161Q8N6U8 529 aaKnown RBP9.04□□□□□ -0.96
CCR9-201ENST00000355983 ZBTB9Q96C00 473 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 MTMR6Q9Y217 621 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 ZFYVE9O95405 1425 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 NPHP3Q7Z494 1330 aa9.04□□□□□ -0.96
CCR9-201ENST00000355983 FIBPO43427 364 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 FCHSD2O94868 740 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 CC2D1AQ6P1N0 951 aaPredicted RBP9.03□□□□□ -0.96
CCR9-201ENST00000355983 CCDC150Q8NCX0 1101 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 ZSCAN31Q96LW9 406 aaPredicted RBP9.03□□□□□ -0.96
CCR9-201ENST00000355983 TNMDQ9H2S6 317 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
CCR9-201ENST00000355983 RAI14Q9P0K7 980 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCR9-201ENST00000355983 DNAI1Q9UI46 699 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 ADAM21Q9UKJ8 722 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 LIMCH1Q9UPQ0 1083 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 CCDC69A6NI79 296 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 HMMRO75330 724 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 CHMLP26374 656 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 ATP6V1AP38606 617 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 ZNF165P49910 485 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 KRT85P78386 507 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 IQCB1Q15051 598 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 SCAND2PQ9GZW5 306 aaPredicted RBP9.03□□□□□ -0.96
CCR9-201ENST00000355983 PALD1Q9ULE6 856 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 SMC3Q9UQE7 1217 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 LRRC7Q96NW7 1537 aa9.03□□□□□ -0.96
CCR9-201ENST00000355983 EIF3CLB5ME19 914 aaKnown RBP9.02□□□□□ -0.97
CCR9-201ENST00000355983 MAP2K7O14733 419 aa9.02□□□□□ -0.97
CCR9-201ENST00000355983 POLR3GO15318 223 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms