RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 AIMP1Q12904 312 aaKnown RBP8.55□□□□□ -1.04
TRIM55-203ENST00000350034 ANKRD13DQ6ZTN6 518 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 PLBD2Q8NHP8 589 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 SUCLG2Q96I99 432 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 PLCH1Q4KWH8 1693 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 LAMB4A4D0S4 1761 aa8.55□□□□□ -1.04
TRIM55-203ENST00000350034 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
TRIM55-203ENST00000350034 BCL9LQ86UU0 1499 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 JCADQ9P266 1359 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-203ENST00000350034 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-203ENST00000350034 APBB1O00213 710 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 SURF6O75683 361 aaKnown RBP8.54□□□□□ -1.04
TRIM55-203ENST00000350034 MYL6BP14649 208 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 NEXNQ0ZGT2 675 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 GCKRQ14397 625 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 HSP90AB4PQ58FF6 505 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-203ENST00000350034 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 PIGBQ92521 554 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-203ENST00000350034 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-203ENST00000350034 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
TRIM55-203ENST00000350034 MX1P20591 662 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 SLC4A3P48751 1232 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 PRELPP51888 382 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 CASP7P55210 303 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 BECN1Q14457 450 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 KIF2CQ99661 725 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 MYD88Q99836 296 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 TBC1D2Q9BYX2 928 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 TMOD3Q9NYL9 352 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 THRAP3Q9Y2W1 955 aaKnown RBP8.53□□□□□ -1.04
TRIM55-203ENST00000350034 BCL9O00512 1426 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 SPATA31A1Q5TZJ5 1347 aa8.53□□□□□ -1.04
TRIM55-203ENST00000350034 EXOC5O00471 708 aa8.52□□□□□ -1.05
TRIM55-203ENST00000350034 PIP4K2AP48426 406 aaPredicted RBP8.52□□□□□ -1.05
TRIM55-203ENST00000350034 RABL6Q3YEC7 729 aaPredicted RBP8.52□□□□□ -1.05
TRIM55-203ENST00000350034 SNX21Q969T3 373 aa8.52□□□□□ -1.05
TRIM55-203ENST00000350034 TEX13AQ9BXU3 409 aaPredicted RBP8.52□□□□□ -1.05
TRIM55-203ENST00000350034 USP35Q9P2H5 1018 aa8.52□□□□□ -1.05
TRIM55-203ENST00000350034 SLIT2O94813 1529 aa8.52□□□□□ -1.05
TRIM55-203ENST00000350034 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 NRAPQ86VF7 1730 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 H7C1W4 665 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 A1BGP04217 495 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-203ENST00000350034 EPHA10Q5JZY3 1008 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 BARGINQ6ZT62 677 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 TTLL7Q6ZT98 887 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 PI4K2BQ8TCG2 481 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 USP26Q9BXU7 913 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 BICC1Q9H694 974 aaKnown RBP8.51□□□□□ -1.05
TRIM55-203ENST00000350034 IL1RAPL2Q9NP60 686 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 DAXXQ9UER7 740 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-203ENST00000350034 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
TRIM55-203ENST00000350034 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
TRIM55-203ENST00000350034 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
TRIM55-203ENST00000350034 CCDC125Q86Z20 511 aa8.5□□□□□ -1.05
TRIM55-203ENST00000350034 DNAJC10Q8IXB1 793 aa8.5□□□□□ -1.05
TRIM55-203ENST00000350034 ANTXR1Q9H6X2 564 aa8.5□□□□□ -1.05
TRIM55-203ENST00000350034 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
TRIM55-203ENST00000350034 TTC41PQ6P2S7 1318 aa8.5□□□□□ -1.05
TRIM55-203ENST00000350034 SASH1O94885 1247 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 ADAMTS2O95450 1211 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 CHMLP26374 656 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 MEX3CQ5U5Q3 659 aaKnown RBP8.49□□□□□ -1.05
TRIM55-203ENST00000350034 TSHZ3Q63HK5 1081 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 CASC1Q6TDU7 716 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 CCDC191Q8NCU4 936 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 IL17RAQ96F46 866 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 SLC4A9Q96Q91 983 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 ISCA1Q9BUE6 129 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 PA2G4Q9UQ80 394 aaKnown RBP8.49□□□□□ -1.05
TRIM55-203ENST00000350034 TUBGCP6Q96RT7 1819 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
TRIM55-203ENST00000350034 ARFGEF2Q9Y6D5 1785 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 A0A087WZG4 1122 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 ATP5J2-PTCD1G3V325 749 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 ERC2O15083 957 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 EPB41L2O43491 1005 aaKnown RBP8.48□□□□□ -1.05
TRIM55-203ENST00000350034 REC8O95072 547 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 STARD3NLO95772 234 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 CYP19A1P11511 503 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-203ENST00000350034 FOXO4P98177 505 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 TCIRG1Q13488 830 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 UBE3BQ7Z3V4 1068 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 UNC5CLQ8IV45 518 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 CLASRPQ8N2M8 674 aaKnown RBP8.48□□□□□ -1.05
TRIM55-203ENST00000350034 ESYT1Q9BSJ8 1104 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 CWC25Q9NXE8 425 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-203ENST00000350034 NUP188Q5SRE5 1749 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms