RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
PTPRO-202ENST00000348962 FAM83GA6ND36 823 aa17.99■□□□□ 0.47
PTPRO-202ENST00000348962 BAG4O95429 457 aaKnown RBP17.99■□□□□ 0.47
PTPRO-202ENST00000348962 TRIM27P14373 513 aa17.99■□□□□ 0.47
PTPRO-202ENST00000348962 NEFHP12036 1026 aa17.98■□□□□ 0.47
PTPRO-202ENST00000348962 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
PTPRO-202ENST00000348962 ZNF771Q7L3S4 317 aaPredicted RBP17.98■□□□□ 0.47
PTPRO-202ENST00000348962 SCAND2PQ9GZW5 306 aaPredicted RBP17.98■□□□□ 0.47
PTPRO-202ENST00000348962 SPC24Q8NBT2 197 aa17.98■□□□□ 0.47
PTPRO-202ENST00000348962 MPHOSPH6Q99547 160 aaKnown RBP17.98■□□□□ 0.47
PTPRO-202ENST00000348962 TRAF1Q13077 416 aa17.98■□□□□ 0.47
PTPRO-202ENST00000348962 TPTE2Q6XPS3 522 aa17.98■□□□□ 0.47
PTPRO-202ENST00000348962 XAGE3Q8WTP9 111 aa17.98■□□□□ 0.47
PTPRO-202ENST00000348962 NYXQ9GZU5 481 aa17.98■□□□□ 0.47
PTPRO-202ENST00000348962 COPS6Q7L5N1 327 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 CETN2P41208 172 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 PPP4R3BQ5MIZ7 849 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 KAT14Q9H8E8 782 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 RPRD2Q5VT52 1461 aaKnown RBP17.97■□□□□ 0.47
PTPRO-202ENST00000348962 C11orf95C9JLR9 678 aaPredicted RBP17.97■□□□□ 0.47
PTPRO-202ENST00000348962 TSG101Q99816 390 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 TFCP2L1Q9NZI6 479 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 NIP7Q9Y221 180 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTPRO-202ENST00000348962 RTCBQ9Y3I0 505 aaKnown RBP17.97■□□□□ 0.47
PTPRO-202ENST00000348962 ANXA1P04083 346 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
PTPRO-202ENST00000348962 ATP10BO94823 1461 aa17.96■□□□□ 0.47
PTPRO-202ENST00000348962 TMEM87AQ8NBN3 555 aa17.96■□□□□ 0.47
PTPRO-202ENST00000348962 ZNF397Q8NF99 534 aaPredicted RBP17.96■□□□□ 0.46
PTPRO-202ENST00000348962 PPIP5K1Q6PFW1 1433 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 CABLES1Q8TDN4 633 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 ALDH1L1O75891 902 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
PTPRO-202ENST00000348962 SLC39A6Q13433 755 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 MAP3K11Q16584 847 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 TMEM67Q5HYA8 995 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 LIMCH1Q9UPQ0 1083 aa17.95■□□□□ 0.46
PTPRO-202ENST00000348962 FGFR1OPO95684 399 aaKnown RBP17.94■□□□□ 0.46
PTPRO-202ENST00000348962 UBA5Q9GZZ9 404 aa17.94■□□□□ 0.46
PTPRO-202ENST00000348962 ATP2B3Q16720 1220 aa17.94■□□□□ 0.46
PTPRO-202ENST00000348962 IARSP41252 1262 aaKnown RBP17.94■□□□□ 0.46
PTPRO-202ENST00000348962 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
PTPRO-202ENST00000348962 ZC3H12CQ9C0D7 883 aaKnown RBP17.94■□□□□ 0.46
PTPRO-202ENST00000348962 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
PTPRO-202ENST00000348962 CCDC178Q5BJE1 867 aa17.94■□□□□ 0.46
PTPRO-202ENST00000348962 CHPF2Q9P2E5 772 aa17.94■□□□□ 0.46
PTPRO-202ENST00000348962 JDP2Q8WYK2 163 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 GCP02774 474 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 FKBP15Q5T1M5 1219 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 NCOA7Q8NI08 942 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 TCP11L1Q9NUJ3 509 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 NF2P35240 595 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 SSR1P43307 286 aaKnown RBP17.93■□□□□ 0.46
PTPRO-202ENST00000348962 ARHGAP45Q92619 1136 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 SIRT1Q96EB6 747 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 STX8Q9UNK0 236 aa17.93■□□□□ 0.46
PTPRO-202ENST00000348962 DUOX2Q9NRD8 1548 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 EPB41L2O43491 1005 aaKnown RBP17.92■□□□□ 0.46
PTPRO-202ENST00000348962 ZRSR2Q15696 482 aaKnown RBP17.92■□□□□ 0.46
PTPRO-202ENST00000348962 SEPT7Q16181 437 aaKnown RBP17.92■□□□□ 0.46
PTPRO-202ENST00000348962 CFAP100Q494V2 611 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 DZIP3Q86Y13 1208 aaKnown RBP17.92■□□□□ 0.46
PTPRO-202ENST00000348962 TAF4BQ92750 862 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 GOLGA6L10A6NI86 522 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 FBLN1P23142 703 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 SKIDA1Q1XH10 827 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 CCDC150Q8NCX0 1101 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 FLT4P35916 1363 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 VPS36Q86VN1 386 aa17.92■□□□□ 0.46
PTPRO-202ENST00000348962 JARID2Q92833 1246 aaPredicted RBP17.92■□□□□ 0.46
PTPRO-202ENST00000348962 CDCA7Q9BWT1 371 aaPredicted RBP17.92■□□□□ 0.46
PTPRO-202ENST00000348962 IL15P40933 162 aaPredicted RBP17.91■□□□□ 0.46
PTPRO-202ENST00000348962 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
PTPRO-202ENST00000348962 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 USP16Q9Y5T5 823 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 ZNF804AQ7Z570 1209 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 FILIP1Q7Z7B0 1213 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 ABCC10Q5T3U5 1492 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 IQCEQ6IPM2 695 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
PTPRO-202ENST00000348962 GRM8O00222 908 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 CYP7A1P22680 504 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 RHPN1Q8TCX5 695 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 CALML4Q96GE6 196 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 KCNA6P17658 529 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 CETN1Q12798 172 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 GUCY1B3Q02153 619 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 JAKMIP3Q5VZ66 844 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 AMPD3Q01432 767 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 EIF4A2Q14240 407 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms