RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 UBAP1LF5GYI3 381 aa20.96■□□□□ 0.95
SMARCC2-202ENST00000347471 BOLA2Q9H3K6 86 aa20.96■□□□□ 0.95
SMARCC2-202ENST00000347471 PRIM1P49642 420 aaKnown RBP20.96■□□□□ 0.95
SMARCC2-202ENST00000347471 ALS2Q96Q42 1657 aa20.96■□□□□ 0.95
SMARCC2-202ENST00000347471 LMBR1LQ6UX01 489 aa20.95■□□□□ 0.94
SMARCC2-202ENST00000347471 NDUFB9Q9Y6M9 179 aa20.95■□□□□ 0.94
SMARCC2-202ENST00000347471 ERVV-2B6SEH9 535 aa20.95■□□□□ 0.94
SMARCC2-202ENST00000347471 RBM25P49756 843 aaKnown RBP20.95■□□□□ 0.94
SMARCC2-202ENST00000347471 NEUROD6Q96NK8 337 aa20.95■□□□□ 0.94
SMARCC2-202ENST00000347471 POLA2Q14181 598 aa20.95■□□□□ 0.94
SMARCC2-202ENST00000347471 FOXD4L5Q5VV16 416 aaPredicted RBP20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 FOXD4L4Q8WXT5 416 aaPredicted RBP20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 USP26Q9BXU7 913 aa20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 KAZALD1Q96I82 304 aa20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 OVOS2A0A0G2JMS6 1433 aa20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 STRCQ7RTU9 1775 aa20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 C8orf37Q96NL8 207 aa20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 UPF3BQ9BZI7 483 aaKnown RBP20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 DIAPH3Q9NSV4 1193 aa20.94■□□□□ 0.94
SMARCC2-202ENST00000347471 GPATCH3Q96I76 525 aa20.93■□□□□ 0.94
SMARCC2-202ENST00000347471 GZF1Q9H116 711 aaPredicted RBP20.93■□□□□ 0.94
SMARCC2-202ENST00000347471 HEG1Q9ULI3 1381 aa20.93■□□□□ 0.94
SMARCC2-202ENST00000347471 LRRC37A3O60309 1634 aa20.93■□□□□ 0.94
SMARCC2-202ENST00000347471 KCNJ4P48050 445 aa20.93■□□□□ 0.94
SMARCC2-202ENST00000347471 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.93■□□□□ 0.94
SMARCC2-202ENST00000347471 TLR7Q9NYK1 1049 aaKnown RBP20.93■□□□□ 0.94
SMARCC2-202ENST00000347471 NEK4P51957 841 aa20.92■□□□□ 0.94
SMARCC2-202ENST00000347471 KIAA1211Q6ZU35 1233 aa20.92■□□□□ 0.94
SMARCC2-202ENST00000347471 CNTROBQ8N137 903 aa20.92■□□□□ 0.94
SMARCC2-202ENST00000347471 TBC1D2BQ9UPU7 963 aa20.92■□□□□ 0.94
SMARCC2-202ENST00000347471 USP54Q70EL1 1684 aa20.92■□□□□ 0.94
SMARCC2-202ENST00000347471 CHMLP26374 656 aa20.91■□□□□ 0.94
SMARCC2-202ENST00000347471 PLBD2Q8NHP8 589 aa20.91■□□□□ 0.94
SMARCC2-202ENST00000347471 NGLY1Q96IV0 654 aa20.91■□□□□ 0.94
SMARCC2-202ENST00000347471 ZNF594Q96JF6 807 aaPredicted RBP20.91■□□□□ 0.94
SMARCC2-202ENST00000347471 DNAJC2Q99543 621 aaKnown RBP20.91■□□□□ 0.94
SMARCC2-202ENST00000347471 LARP6Q9BRS8 491 aaKnown RBP20.91■□□□□ 0.94
SMARCC2-202ENST00000347471 ESYT1Q9BSJ8 1104 aa20.91■□□□□ 0.94
SMARCC2-202ENST00000347471 DDB1Q16531 1140 aa20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 TAF7LQ5H9L4 462 aa20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 EAF2Q96CJ1 260 aaPredicted RBP20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 KIF2CQ99661 725 aa20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 MCCP23508 829 aa20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 EDC3Q96F86 508 aaKnown RBP20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 FAM89AQ96GI7 184 aa20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 CWC25Q9NXE8 425 aaPredicted RBP20.9■□□□□ 0.94
SMARCC2-202ENST00000347471 STARD3NLO95772 234 aa20.89■□□□□ 0.94
SMARCC2-202ENST00000347471 KIF6Q6ZMV9 814 aa20.89■□□□□ 0.94
SMARCC2-202ENST00000347471 ECHDC1Q9NTX5 307 aa20.89■□□□□ 0.94
SMARCC2-202ENST00000347471 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.93
SMARCC2-202ENST00000347471 K7ELQ4 463 aaPredicted RBP20.89■□□□□ 0.93
SMARCC2-202ENST00000347471 SASH1O94885 1247 aa20.89■□□□□ 0.93
SMARCC2-202ENST00000347471 KCNQ4P56696 695 aa20.89■□□□□ 0.93
SMARCC2-202ENST00000347471 ERC1Q8IUD2 1116 aa20.89■□□□□ 0.93
SMARCC2-202ENST00000347471 TPRNQ4KMQ1 711 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 IL25Q9H293 177 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 OSBPL3Q9H4L5 887 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 TOM1O60784 492 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 DTNBO60941 627 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 TFCP2Q12800 502 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 FAM182BQ5T319 152 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 FSD1Q9BTV5 496 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 ATG3Q9NT62 314 aa20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 PHRF1Q9P1Y6 1649 aaKnown RBP20.88■□□□□ 0.93
SMARCC2-202ENST00000347471 ST18O60284 1047 aa20.87■□□□□ 0.93
SMARCC2-202ENST00000347471 GLRX3O76003 335 aaKnown RBP20.87■□□□□ 0.93
SMARCC2-202ENST00000347471 CHMP5Q9NZZ3 219 aa20.87■□□□□ 0.93
SMARCC2-202ENST00000347471 SYNE4Q8N205 404 aa20.87■□□□□ 0.93
SMARCC2-202ENST00000347471 PALD1Q9ULE6 856 aa20.87■□□□□ 0.93
SMARCC2-202ENST00000347471 FAM98CQ17RN3 349 aaKnown RBP20.87■□□□□ 0.93
SMARCC2-202ENST00000347471 RABEP1Q15276 862 aa20.86■□□□□ 0.93
SMARCC2-202ENST00000347471 PI4K2BQ8TCG2 481 aa20.86■□□□□ 0.93
SMARCC2-202ENST00000347471 LMO7Q8WWI1 1683 aa20.85■□□□□ 0.93
SMARCC2-202ENST00000347471 FOXD4L6Q3SYB3 417 aaPredicted RBP20.85■□□□□ 0.93
SMARCC2-202ENST00000347471 FOXD4L3Q6VB84 417 aaPredicted RBP20.85■□□□□ 0.93
SMARCC2-202ENST00000347471 ZBTB1Q9Y2K1 713 aa20.85■□□□□ 0.93
SMARCC2-202ENST00000347471 PXDNLA1KZ92 1463 aa20.84■□□□□ 0.93
SMARCC2-202ENST00000347471 STAP2Q9UGK3 403 aa20.84■□□□□ 0.93
SMARCC2-202ENST00000347471 GORABQ5T7V8 394 aa20.83■□□□□ 0.93
SMARCC2-202ENST00000347471 LRP10Q7Z4F1 713 aa20.83■□□□□ 0.93
SMARCC2-202ENST00000347471 SALL3Q9BXA9 1300 aa20.83■□□□□ 0.93
SMARCC2-202ENST00000347471 TIMM10P62072 90 aa20.83■□□□□ 0.92
SMARCC2-202ENST00000347471 EIF5BO60841 1220 aaKnown RBP20.82■□□□□ 0.92
SMARCC2-202ENST00000347471 XIRP1Q702N8 1843 aaKnown RBP20.82■□□□□ 0.92
SMARCC2-202ENST00000347471 MTX1Q13505 466 aa20.82■□□□□ 0.92
SMARCC2-202ENST00000347471 ANTXR1Q9H6X2 564 aa20.82■□□□□ 0.92
SMARCC2-202ENST00000347471 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
SMARCC2-202ENST00000347471 DBNDD2Q9BQY9 259 aa20.81■□□□□ 0.92
SMARCC2-202ENST00000347471 CPA1P15085 419 aa20.81■□□□□ 0.92
SMARCC2-202ENST00000347471 ATP6V1AP38606 617 aa20.81■□□□□ 0.92
SMARCC2-202ENST00000347471 HLFQ16534 295 aa20.81■□□□□ 0.92
SMARCC2-202ENST00000347471 PTPN12Q05209 780 aaKnown RBP20.81■□□□□ 0.92
SMARCC2-202ENST00000347471 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
SMARCC2-202ENST00000347471 FAM227BQ96M60 508 aa20.8■□□□□ 0.92
SMARCC2-202ENST00000347471 LRRC24Q50LG9 513 aa20.8■□□□□ 0.92
SMARCC2-202ENST00000347471 SMIM5Q71RC9 77 aa20.8■□□□□ 0.92
SMARCC2-202ENST00000347471 DDX46Q7L014 1031 aaKnown RBP20.8■□□□□ 0.92
SMARCC2-202ENST00000347471 KDM3BQ7LBC6 1761 aa20.8■□□□□ 0.92
SMARCC2-202ENST00000347471 KCNQ2O43526 872 aa20.79■□□□□ 0.92
SMARCC2-202ENST00000347471 PUS3Q9BZE2 481 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms