RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 ZNF831Q5JPB2 1677 aa21.43■■□□□ 1.02
FRMD4A-202ENST00000342409 NEURL1BA8MQ27 555 aa21.43■■□□□ 1.02
FRMD4A-202ENST00000342409 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
FRMD4A-202ENST00000342409 PLBD2Q8NHP8 589 aa21.43■■□□□ 1.02
FRMD4A-202ENST00000342409 MYD88Q99836 296 aa21.43■■□□□ 1.02
FRMD4A-202ENST00000342409 NHSQ6T4R5 1651 aa21.42■■□□□ 1.02
FRMD4A-202ENST00000342409 TEX13AQ9BXU3 409 aaPredicted RBP21.42■■□□□ 1.02
FRMD4A-202ENST00000342409 NUP98P52948 1817 aa21.42■■□□□ 1.02
FRMD4A-202ENST00000342409 ANKRD36CQ5JPF3 1778 aa21.42■■□□□ 1.02
FRMD4A-202ENST00000342409 KCNQ2O43526 872 aa21.41■■□□□ 1.02
FRMD4A-202ENST00000342409 HMMRO75330 724 aa21.41■■□□□ 1.02
FRMD4A-202ENST00000342409 CYP19A1P11511 503 aaPredicted RBP21.41■■□□□ 1.02
FRMD4A-202ENST00000342409 SSH3Q8TE77 659 aa21.41■■□□□ 1.02
FRMD4A-202ENST00000342409 POLA2Q14181 598 aa21.41■■□□□ 1.02
FRMD4A-202ENST00000342409 KAZALD1Q96I82 304 aa21.41■■□□□ 1.02
FRMD4A-202ENST00000342409 GJD4Q96KN9 370 aaPredicted RBP21.41■■□□□ 1.02
FRMD4A-202ENST00000342409 BRWD3Q6RI45 1802 aa21.4■■□□□ 1.02
FRMD4A-202ENST00000342409 TUBGCP6Q96RT7 1819 aa21.4■■□□□ 1.02
FRMD4A-202ENST00000342409 GRM8O00222 908 aa21.4■■□□□ 1.02
FRMD4A-202ENST00000342409 GCKRQ14397 625 aa21.39■■□□□ 1.01
FRMD4A-202ENST00000342409 PPP1R42Q7Z4L9 355 aa21.39■■□□□ 1.01
FRMD4A-202ENST00000342409 C9orf78Q9NZ63 289 aaPredicted RBP21.39■■□□□ 1.01
FRMD4A-202ENST00000342409 NEXNQ0ZGT2 675 aa21.38■■□□□ 1.01
FRMD4A-202ENST00000342409 SUCLG2Q96I99 432 aa21.38■■□□□ 1.01
FRMD4A-202ENST00000342409 SMARCA5O60264 1052 aaPredicted RBP21.38■■□□□ 1.01
FRMD4A-202ENST00000342409 STARD3NLO95772 234 aa21.38■■□□□ 1.01
FRMD4A-202ENST00000342409 MTX1Q13505 466 aa21.38■■□□□ 1.01
FRMD4A-202ENST00000342409 ONECUT3O60422 494 aaPredicted RBP21.37■■□□□ 1.01
FRMD4A-202ENST00000342409 EXOC6BQ9Y2D4 811 aa21.37■■□□□ 1.01
FRMD4A-202ENST00000342409 ATP5J2-PTCD1G3V325 749 aa21.36■■□□□ 1.01
FRMD4A-202ENST00000342409 PTF1AQ7RTS3 328 aa21.36■■□□□ 1.01
FRMD4A-202ENST00000342409 C16orf71Q8IYS4 520 aaPredicted RBP21.36■■□□□ 1.01
FRMD4A-202ENST00000342409 A0A0G2JS52 829 aa21.35■■□□□ 1.01
FRMD4A-202ENST00000342409 ZBTB1Q9Y2K1 713 aa21.35■■□□□ 1.01
FRMD4A-202ENST00000342409 PALLDQ8WX93 1383 aa21.35■■□□□ 1.01
FRMD4A-202ENST00000342409 OTUD7AQ8TE49 926 aaPredicted RBP21.35■■□□□ 1.01
FRMD4A-202ENST00000342409 ZBTB3Q9H5J0 574 aa21.35■■□□□ 1.01
FRMD4A-202ENST00000342409 TRPC5Q9UL62 973 aaPredicted RBP21.35■■□□□ 1.01
FRMD4A-202ENST00000342409 LY75O60449 1722 aa21.34■■□□□ 1.01
FRMD4A-202ENST00000342409 APBB1O00213 710 aa21.34■■□□□ 1.01
FRMD4A-202ENST00000342409 CASP7P55210 303 aa21.34■■□□□ 1.01
FRMD4A-202ENST00000342409 PLEKHM2Q8IWE5 1019 aa21.34■■□□□ 1.01
FRMD4A-202ENST00000342409 LOC102724428A0A0B4J2F2 783 aa21.33■■□□□ 1.01
FRMD4A-202ENST00000342409 SRGAP3O43295 1099 aa21.33■■□□□ 1.01
FRMD4A-202ENST00000342409 SIK1P57059 783 aa21.33■■□□□ 1.01
FRMD4A-202ENST00000342409 MYT1Q01538 1121 aa21.33■■□□□ 1.01
FRMD4A-202ENST00000342409 ITPK1Q13572 414 aa21.33■■□□□ 1.01
FRMD4A-202ENST00000342409 TAF1LQ8IZX4 1826 aa21.33■■□□□ 1
FRMD4A-202ENST00000342409 EPHA10Q5JZY3 1008 aa21.32■■□□□ 1
FRMD4A-202ENST00000342409 FAM182BQ5T319 152 aa21.32■■□□□ 1
FRMD4A-202ENST00000342409 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
FRMD4A-202ENST00000342409 BICC1Q9H694 974 aaKnown RBP21.32■■□□□ 1
FRMD4A-202ENST00000342409 COL15A1P39059 1388 aa21.32■■□□□ 1
FRMD4A-202ENST00000342409 INTS5Q6P9B9 1019 aaKnown RBP21.31■■□□□ 1
FRMD4A-202ENST00000342409 ISCA1Q9BUE6 129 aa21.31■■□□□ 1
FRMD4A-202ENST00000342409 SEC24BO95487 1268 aa21.3■■□□□ 1
FRMD4A-202ENST00000342409 ATP6V1AP38606 617 aa21.3■■□□□ 1
FRMD4A-202ENST00000342409 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
FRMD4A-202ENST00000342409 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
FRMD4A-202ENST00000342409 H7C1W4 665 aa21.29■■□□□ 1
FRMD4A-202ENST00000342409 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
FRMD4A-202ENST00000342409 QTRT2Q9H974 415 aaKnown RBP21.29■■□□□ 1
FRMD4A-202ENST00000342409 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
FRMD4A-202ENST00000342409 BCORQ6W2J9 1755 aa21.29■■□□□ 1
FRMD4A-202ENST00000342409 MAP3K15Q6ZN16 1313 aa21.29■■□□□ 1
FRMD4A-202ENST00000342409 UBE3BQ7Z3V4 1068 aa21.29■■□□□ 1
FRMD4A-202ENST00000342409 SEPT12Q8IYM1 358 aa21.29■■□□□ 1
FRMD4A-202ENST00000342409 NOP58Q9Y2X3 529 aaKnown RBP21.29■■□□□ 1
FRMD4A-202ENST00000342409 A0A087WZG4 1122 aa21.28■■□□□ 1
FRMD4A-202ENST00000342409 IL6STP40189 918 aaPredicted RBP21.28■■□□□ 1
FRMD4A-202ENST00000342409 CRKLP46109 303 aaKnown RBP21.28■■□□□ 1
FRMD4A-202ENST00000342409 TCIRG1Q13488 830 aa21.28■■□□□ 1
FRMD4A-202ENST00000342409 BMP2KLQ5H9B9 411 aa21.28■■□□□ 1
FRMD4A-202ENST00000342409 LRRCC1Q9C099 1032 aa21.28■■□□□ 1
FRMD4A-202ENST00000342409 MYH3P11055 1940 aa21.28■■□□□ 1
FRMD4A-202ENST00000342409 SURF6O75683 361 aaKnown RBP21.27■■□□□ 1
FRMD4A-202ENST00000342409 EIF5P55010 431 aaKnown RBP21.27■■□□□ 1
FRMD4A-202ENST00000342409 HLFQ16534 295 aa21.27■■□□□ 1
FRMD4A-202ENST00000342409 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
FRMD4A-202ENST00000342409 CWC25Q9NXE8 425 aaPredicted RBP21.27■■□□□ 1
FRMD4A-202ENST00000342409 GSPT1P15170 499 aaKnown RBP21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 KIF6Q6ZMV9 814 aa21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 CCDC191Q8NCU4 936 aa21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 TRIM28Q13263 835 aaKnown RBP21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 RABL6Q3YEC7 729 aaPredicted RBP21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 GIGYF2Q6Y7W6 1299 aaKnown RBP21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 BCL11AQ9H165 835 aa21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 PA2G4Q9UQ80 394 aaKnown RBP21.26■□□□□ 0.99
FRMD4A-202ENST00000342409 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
FRMD4A-202ENST00000342409 AK9Q5TCS8 1911 aa21.25■□□□□ 0.99
FRMD4A-202ENST00000342409 TTC22Q5TAA0 569 aa21.24■□□□□ 0.99
FRMD4A-202ENST00000342409 ZBTB47Q9UFB7 747 aaPredicted RBP21.24■□□□□ 0.99
FRMD4A-202ENST00000342409 RFX5P48382 616 aaPredicted RBP21.24■□□□□ 0.99
FRMD4A-202ENST00000342409 FOXO4P98177 505 aa21.24■□□□□ 0.99
FRMD4A-202ENST00000342409 LINC00116Q8NCU8 138 aa21.24■□□□□ 0.99
FRMD4A-202ENST00000342409 RHPN1Q8TCX5 695 aa21.24■□□□□ 0.99
FRMD4A-202ENST00000342409 OSBPL3Q9H4L5 887 aa21.23■□□□□ 0.99
FRMD4A-202ENST00000342409 EP400Q96L91 3159 aa21.23■□□□□ 0.99
FRMD4A-202ENST00000342409 PDE1AP54750 535 aa21.22■□□□□ 0.99
FRMD4A-202ENST00000342409 KCNQ4P56696 695 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms