RNA–Protein interactions for RNA: ENST00000340954.11

STAU1-201, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STAU1, Length 3,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-201ENST00000340954 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
STAU1-201ENST00000340954 FAM43AQ8N2R8 423 aa12.91□□□□□ -0.34
STAU1-201ENST00000340954 SYTL4Q96C24 671 aaPredicted RBP12.91□□□□□ -0.34
STAU1-201ENST00000340954 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
STAU1-201ENST00000340954 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
STAU1-201ENST00000340954 ADCY9O60503 1353 aa12.9□□□□□ -0.34
STAU1-201ENST00000340954 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
STAU1-201ENST00000340954 HSP90AA2PQ14568 343 aaPredicted RBP12.9□□□□□ -0.34
STAU1-201ENST00000340954 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
STAU1-201ENST00000340954 BABAM1Q9NWV8 329 aa12.9□□□□□ -0.34
STAU1-201ENST00000340954 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.35
STAU1-201ENST00000340954 DDX58O95786 925 aaKnown RBP12.9□□□□□ -0.35
STAU1-201ENST00000340954 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.35
STAU1-201ENST00000340954 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.35
STAU1-201ENST00000340954 ERC2O15083 957 aa12.89□□□□□ -0.35
STAU1-201ENST00000340954 PTMAP06454 111 aaKnown RBP12.89□□□□□ -0.35
STAU1-201ENST00000340954 FOXD4L6Q3SYB3 417 aaPredicted RBP12.89□□□□□ -0.35
STAU1-201ENST00000340954 FOXD4L3Q6VB84 417 aaPredicted RBP12.89□□□□□ -0.35
STAU1-201ENST00000340954 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
STAU1-201ENST00000340954 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
STAU1-201ENST00000340954 UPF3BQ9BZI7 483 aaKnown RBP12.89□□□□□ -0.35
STAU1-201ENST00000340954 BICC1Q9H694 974 aaKnown RBP12.89□□□□□ -0.35
STAU1-201ENST00000340954 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
STAU1-201ENST00000340954 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
STAU1-201ENST00000340954 CCDC85AQ96PX6 553 aaPredicted RBP12.88□□□□□ -0.35
STAU1-201ENST00000340954 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
STAU1-201ENST00000340954 REC8O95072 547 aa12.88□□□□□ -0.35
STAU1-201ENST00000340954 NEK4P51957 841 aa12.88□□□□□ -0.35
STAU1-201ENST00000340954 K7ELQ4 463 aaPredicted RBP12.88□□□□□ -0.35
STAU1-201ENST00000340954 DDX21Q9NR30 783 aaKnown RBP eCLIP12.88□□□□□ -0.35
STAU1-201ENST00000340954 ZNF142P52746 1687 aaPredicted RBP12.88□□□□□ -0.35
STAU1-201ENST00000340954 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 SSH3Q8TE77 659 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 MEGF6O75095 1541 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 GRM8O00222 908 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 A1BGP04217 495 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
STAU1-201ENST00000340954 TMCO4Q5TGY1 634 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 AACSQ86V21 672 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 ZCRB1Q8TBF4 217 aaKnown RBP12.87□□□□□ -0.35
STAU1-201ENST00000340954 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
STAU1-201ENST00000340954 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 IL25Q9H293 177 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 NDUFB9Q9Y6M9 179 aa12.87□□□□□ -0.35
STAU1-201ENST00000340954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
STAU1-201ENST00000340954 RGPD5Q99666 1765 aa12.86□□□□□ -0.35
STAU1-201ENST00000340954 VIRMAQ69YN4 1812 aaKnown RBP12.86□□□□□ -0.35
STAU1-201ENST00000340954 PDIA6Q15084 440 aa12.86□□□□□ -0.35
STAU1-201ENST00000340954 CLASRPQ8N2M8 674 aaKnown RBP12.86□□□□□ -0.35
STAU1-201ENST00000340954 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
STAU1-201ENST00000340954 SNRPA1P09661 255 aaKnown RBP12.86□□□□□ -0.35
STAU1-201ENST00000340954 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■□□□ 11.6
STAU1-201ENST00000340954 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
STAU1-201ENST00000340954 PALD1Q9ULE6 856 aa12.86□□□□□ -0.35
STAU1-201ENST00000340954 IGKV5-2P06315 115 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 HOXB7P09629 217 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 CHMLP26374 656 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 SSFA2P28290 1259 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 MCM4P33991 863 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 EPHA10Q5JZY3 1008 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
STAU1-201ENST00000340954 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
STAU1-201ENST00000340954 MED1Q15648 1581 aaPredicted RBP12.85□□□□□ -0.35
STAU1-201ENST00000340954 A0A087WZG4 1122 aa12.84□□□□□ -0.35
STAU1-201ENST00000340954 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
STAU1-201ENST00000340954 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
STAU1-201ENST00000340954 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
STAU1-201ENST00000340954 ESYT1Q9BSJ8 1104 aa12.84□□□□□ -0.35
STAU1-201ENST00000340954 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
STAU1-201ENST00000340954 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
STAU1-201ENST00000340954 PKP1Q13835 747 aa12.83□□□□□ -0.35
STAU1-201ENST00000340954 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.35
STAU1-201ENST00000340954 ST18O60284 1047 aa12.83□□□□□ -0.36
STAU1-201ENST00000340954 RABEP1Q15276 862 aa12.83□□□□□ -0.36
STAU1-201ENST00000340954 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
STAU1-201ENST00000340954 NUTM2BA6NNL0 878 aaPredicted RBP12.83□□□□□ -0.36
STAU1-201ENST00000340954 NUTM2EB1AL46 878 aaPredicted RBP12.83□□□□□ -0.36
STAU1-201ENST00000340954 NUTM2AQ8IVF1 878 aaPredicted RBP12.83□□□□□ -0.36
STAU1-201ENST00000340954 SETQ01105 290 aaPredicted RBP12.82□□□□□ -0.36
STAU1-201ENST00000340954 EDC3Q96F86 508 aaKnown RBP12.82□□□□□ -0.36
STAU1-201ENST00000340954 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 IL2RBP14784 551 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 CPA1P15085 419 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 POLA2Q14181 598 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 SNX21Q969T3 373 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 DIAPH3Q9NSV4 1193 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 KCNJ4P48050 445 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 KIAA1211Q6ZU35 1233 aa12.82□□□□□ -0.36
STAU1-201ENST00000340954 TRAK2O60296 914 aa12.81□□□□□ -0.36
STAU1-201ENST00000340954 GCKRQ14397 625 aa12.81□□□□□ -0.36
STAU1-201ENST00000340954 DNAJC2Q99543 621 aaKnown RBP12.81□□□□□ -0.36
STAU1-201ENST00000340954 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
STAU1-201ENST00000340954 MCCP23508 829 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms