RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.8
HPS1-202ENST00000338546 MYD88Q99836 296 aa20.08■□□□□ 0.8
HPS1-202ENST00000338546 AOX1Q06278 1338 aa20.07■□□□□ 0.8
HPS1-202ENST00000338546 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
HPS1-202ENST00000338546 SMARCA5O60264 1052 aaPredicted RBP20.07■□□□□ 0.8
HPS1-202ENST00000338546 CDC45O75419 566 aa20.07■□□□□ 0.8
HPS1-202ENST00000338546 KIF1BPQ96EK5 621 aa20.07■□□□□ 0.8
HPS1-202ENST00000338546 STAP2Q9UGK3 403 aa20.07■□□□□ 0.8
HPS1-202ENST00000338546 ASAP1Q9ULH1 1129 aa20.07■□□□□ 0.8
HPS1-202ENST00000338546 SURF6O75683 361 aaKnown RBP20.06■□□□□ 0.8
HPS1-202ENST00000338546 VPS72Q15906 364 aa20.06■□□□□ 0.8
HPS1-202ENST00000338546 ERC1Q8IUD2 1116 aa20.06■□□□□ 0.8
HPS1-202ENST00000338546 GSPT1P15170 499 aaKnown RBP20.05■□□□□ 0.8
HPS1-202ENST00000338546 PDE1AP54750 535 aa20.05■□□□□ 0.8
HPS1-202ENST00000338546 FNBP4Q8N3X1 1017 aaPredicted RBP20.05■□□□□ 0.8
HPS1-202ENST00000338546 NUP188Q5SRE5 1749 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 APBB1O00213 710 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 A1BGP04217 495 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 ERICH6Q7L0X2 663 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 RHPN1Q8TCX5 695 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
HPS1-202ENST00000338546 MX1P20591 662 aa20.03■□□□□ 0.8
HPS1-202ENST00000338546 OTUD7AQ8TE49 926 aaPredicted RBP20.03■□□□□ 0.8
HPS1-202ENST00000338546 C22orf23Q9BZE7 217 aa20.03■□□□□ 0.8
HPS1-202ENST00000338546 AFDNP55196 1824 aaKnown RBP20.03■□□□□ 0.8
HPS1-202ENST00000338546 DOT1LQ8TEK3 1739 aa20.02■□□□□ 0.8
HPS1-202ENST00000338546 BCL9LQ86UU0 1499 aa20.02■□□□□ 0.8
HPS1-202ENST00000338546 PIP4K2AP48426 406 aaPredicted RBP20.02■□□□□ 0.8
HPS1-202ENST00000338546 TBC1D9Q6ZT07 1266 aa20.02■□□□□ 0.8
HPS1-202ENST00000338546 DNAJC10Q8IXB1 793 aa20.02■□□□□ 0.8
HPS1-202ENST00000338546 CCDC191Q8NCU4 936 aa20.02■□□□□ 0.8
HPS1-202ENST00000338546 NGLY1Q96IV0 654 aa20.02■□□□□ 0.8
HPS1-202ENST00000338546 PRIM1P49642 420 aaKnown RBP20.01■□□□□ 0.79
HPS1-202ENST00000338546 CASC1Q6TDU7 716 aa20.01■□□□□ 0.79
HPS1-202ENST00000338546 BICC1Q9H694 974 aaKnown RBP20.01■□□□□ 0.79
HPS1-202ENST00000338546 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.01■□□□□ 0.79
HPS1-202ENST00000338546 MFAP1P55081 439 aaKnown RBP20■□□□□ 0.79
HPS1-202ENST00000338546 TRIM28Q13263 835 aaKnown RBP20■□□□□ 0.79
HPS1-202ENST00000338546 RABL6Q3YEC7 729 aaPredicted RBP20■□□□□ 0.79
HPS1-202ENST00000338546 TTLL7Q6ZT98 887 aa20■□□□□ 0.79
HPS1-202ENST00000338546 MARCH10Q8NA82 808 aaPredicted RBP20■□□□□ 0.79
HPS1-202ENST00000338546 RBM42Q9BTD8 480 aaKnown RBP20■□□□□ 0.79
HPS1-202ENST00000338546 CCDC9Q9Y3X0 531 aaKnown RBP20■□□□□ 0.79
HPS1-202ENST00000338546 H7C1W4 665 aa20■□□□□ 0.79
HPS1-202ENST00000338546 RBM25P49756 843 aaKnown RBP20■□□□□ 0.79
HPS1-202ENST00000338546 CWC25Q9NXE8 425 aaPredicted RBP20■□□□□ 0.79
HPS1-202ENST00000338546 DAXXQ9UER7 740 aaPredicted RBP20■□□□□ 0.79
HPS1-202ENST00000338546 CYP19A1P11511 503 aaPredicted RBP19.99■□□□□ 0.79
HPS1-202ENST00000338546 SDSP20132 328 aa19.99■□□□□ 0.79
HPS1-202ENST00000338546 CASP7P55210 303 aa19.99■□□□□ 0.79
HPS1-202ENST00000338546 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
HPS1-202ENST00000338546 USP42Q9H9J4 1324 aaKnown RBP19.98■□□□□ 0.79
HPS1-202ENST00000338546 A0A087WZG4 1122 aa19.98■□□□□ 0.79
HPS1-202ENST00000338546 BECN1Q14457 450 aa19.98■□□□□ 0.79
HPS1-202ENST00000338546 KIF6Q6ZMV9 814 aa19.98■□□□□ 0.79
HPS1-202ENST00000338546 C8orf37Q96NL8 207 aa19.98■□□□□ 0.79
HPS1-202ENST00000338546 OS9Q13438 667 aaPredicted RBP19.97■□□□□ 0.79
HPS1-202ENST00000338546 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
HPS1-202ENST00000338546 SYTL4Q96C24 671 aaPredicted RBP19.97■□□□□ 0.79
HPS1-202ENST00000338546 ISCA1Q9BUE6 129 aa19.97■□□□□ 0.79
HPS1-202ENST00000338546 COPRSQ9NQ92 184 aa19.97■□□□□ 0.79
HPS1-202ENST00000338546 TTC41PQ6P2S7 1318 aa19.97■□□□□ 0.79
HPS1-202ENST00000338546 G3BP1Q13283 466 aaKnown RBP eCLIP19.96■□□□□ 0.79
HPS1-202ENST00000338546 TCIRG1Q13488 830 aa19.96■□□□□ 0.79
HPS1-202ENST00000338546 HSP90AB3PQ58FF7 597 aa19.96■□□□□ 0.79
HPS1-202ENST00000338546 CLASRPQ8N2M8 674 aaKnown RBP19.96■□□□□ 0.79
HPS1-202ENST00000338546 KAT6BQ8WYB5 2073 aa19.96■□□□□ 0.79
HPS1-202ENST00000338546 TUBGCP6Q96RT7 1819 aa19.96■□□□□ 0.79
HPS1-202ENST00000338546 ATP5J2-PTCD1G3V325 749 aa19.95■□□□□ 0.78
HPS1-202ENST00000338546 IL6STP40189 918 aaPredicted RBP19.95■□□□□ 0.78
HPS1-202ENST00000338546 UBE3BQ7Z3V4 1068 aa19.95■□□□□ 0.78
HPS1-202ENST00000338546 SLC4A9Q96Q91 983 aa19.95■□□□□ 0.78
HPS1-202ENST00000338546 TJP1Q07157 1748 aa19.95■□□□□ 0.78
HPS1-202ENST00000338546 IL1RAPL2Q9NP60 686 aa19.95■□□□□ 0.78
HPS1-202ENST00000338546 MAP3K15Q6ZN16 1313 aa19.94■□□□□ 0.78
HPS1-202ENST00000338546 ZBTB3Q9H5J0 574 aa19.94■□□□□ 0.78
HPS1-202ENST00000338546 ZNF831Q5JPB2 1677 aa19.93■□□□□ 0.78
HPS1-202ENST00000338546 ERVV-1B6SEH8 477 aa19.93■□□□□ 0.78
HPS1-202ENST00000338546 EPHA10Q5JZY3 1008 aa19.93■□□□□ 0.78
HPS1-202ENST00000338546 USP21Q9UK80 565 aa19.93■□□□□ 0.78
HPS1-202ENST00000338546 GIGYF2Q6Y7W6 1299 aaKnown RBP19.92■□□□□ 0.78
HPS1-202ENST00000338546 GPATCH3Q96I76 525 aa19.92■□□□□ 0.78
HPS1-202ENST00000338546 ERC2O15083 957 aa19.91■□□□□ 0.78
HPS1-202ENST00000338546 RFX5P48382 616 aaPredicted RBP19.91■□□□□ 0.78
HPS1-202ENST00000338546 FAM98CQ17RN3 349 aaKnown RBP19.91■□□□□ 0.78
HPS1-202ENST00000338546 GLRX3O76003 335 aaKnown RBP19.91■□□□□ 0.78
HPS1-202ENST00000338546 REC8O95072 547 aa19.91■□□□□ 0.78
HPS1-202ENST00000338546 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
HPS1-202ENST00000338546 PA2G4Q9UQ80 394 aaKnown RBP19.91■□□□□ 0.78
HPS1-202ENST00000338546 FOXO4P98177 505 aa19.9■□□□□ 0.78
HPS1-202ENST00000338546 NUTM1Q86Y26 1132 aa19.9■□□□□ 0.78
HPS1-202ENST00000338546 PI4K2BQ8TCG2 481 aa19.9■□□□□ 0.78
HPS1-202ENST00000338546 PLA2G12BQ9BX93 195 aa19.9■□□□□ 0.78
HPS1-202ENST00000338546 RREB1Q92766 1687 aa19.9■□□□□ 0.78
HPS1-202ENST00000338546 THSD7AQ9UPZ6 1657 aa19.89■□□□□ 0.77
HPS1-202ENST00000338546 LOC102724428A0A0B4J2F2 783 aa19.89■□□□□ 0.77
HPS1-202ENST00000338546 EPB41L2O43491 1005 aaKnown RBP19.89■□□□□ 0.77
HPS1-202ENST00000338546 SASH1O94885 1247 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms