RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 NBPF10Q6P3W6 841 aaKnown RBP16.72■□□□□ 0.27
LMO1-201ENST00000335790 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
LMO1-201ENST00000335790 NBPF15Q8N660 670 aa16.72■□□□□ 0.27
LMO1-201ENST00000335790 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
LMO1-201ENST00000335790 LRRCC1Q9C099 1032 aa16.72■□□□□ 0.27
LMO1-201ENST00000335790 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
LMO1-201ENST00000335790 TRPC5Q9UL62 973 aaPredicted RBP16.72■□□□□ 0.27
LMO1-201ENST00000335790 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
LMO1-201ENST00000335790 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
LMO1-201ENST00000335790 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
LMO1-201ENST00000335790 MYL6BP14649 208 aa16.71■□□□□ 0.27
LMO1-201ENST00000335790 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
LMO1-201ENST00000335790 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.27
LMO1-201ENST00000335790 PIGBQ92521 554 aa16.71■□□□□ 0.27
LMO1-201ENST00000335790 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
LMO1-201ENST00000335790 AIMP1Q12904 312 aaKnown RBP16.7■□□□□ 0.26
LMO1-201ENST00000335790 GCKRQ14397 625 aa16.7■□□□□ 0.26
LMO1-201ENST00000335790 CWF19L2Q2TBE0 894 aaKnown RBP16.7■□□□□ 0.26
LMO1-201ENST00000335790 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
LMO1-201ENST00000335790 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
LMO1-201ENST00000335790 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
LMO1-201ENST00000335790 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
LMO1-201ENST00000335790 STAP2Q9UGK3 403 aa16.7■□□□□ 0.26
LMO1-201ENST00000335790 EXOC6BQ9Y2D4 811 aa16.7■□□□□ 0.26
LMO1-201ENST00000335790 TJP1Q07157 1748 aa16.7■□□□□ 0.26
LMO1-201ENST00000335790 AOX1Q06278 1338 aa16.7■□□□□ 0.26
LMO1-201ENST00000335790 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
LMO1-201ENST00000335790 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
LMO1-201ENST00000335790 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
LMO1-201ENST00000335790 PDE1AP54750 535 aa16.68■□□□□ 0.26
LMO1-201ENST00000335790 OTUD7AQ8TE49 926 aaPredicted RBP16.68■□□□□ 0.26
LMO1-201ENST00000335790 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
LMO1-201ENST00000335790 RREB1Q92766 1687 aa16.67■□□□□ 0.26
LMO1-201ENST00000335790 CDC45O75419 566 aa16.67■□□□□ 0.26
LMO1-201ENST00000335790 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
LMO1-201ENST00000335790 MYD88Q99836 296 aa16.67■□□□□ 0.26
LMO1-201ENST00000335790 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
LMO1-201ENST00000335790 PTCD1O75127 700 aaKnown RBP16.66■□□□□ 0.26
LMO1-201ENST00000335790 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
LMO1-201ENST00000335790 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
LMO1-201ENST00000335790 BCL9LQ86UU0 1499 aa16.66■□□□□ 0.26
LMO1-201ENST00000335790 SURF6O75683 361 aaKnown RBP16.65■□□□□ 0.26
LMO1-201ENST00000335790 A1BGP04217 495 aa16.65■□□□□ 0.26
LMO1-201ENST00000335790 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
LMO1-201ENST00000335790 CASP7P55210 303 aa16.65■□□□□ 0.26
LMO1-201ENST00000335790 DDB1Q16531 1140 aa16.65■□□□□ 0.26
LMO1-201ENST00000335790 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
LMO1-201ENST00000335790 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
LMO1-201ENST00000335790 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
LMO1-201ENST00000335790 VPS72Q15906 364 aa16.64■□□□□ 0.25
LMO1-201ENST00000335790 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
LMO1-201ENST00000335790 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
LMO1-201ENST00000335790 FNBP4Q8N3X1 1017 aaPredicted RBP16.64■□□□□ 0.25
LMO1-201ENST00000335790 C22orf23Q9BZE7 217 aa16.64■□□□□ 0.25
LMO1-201ENST00000335790 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
LMO1-201ENST00000335790 SDSP20132 328 aa16.63■□□□□ 0.25
LMO1-201ENST00000335790 MX1P20591 662 aa16.63■□□□□ 0.25
LMO1-201ENST00000335790 PIP4K2AP48426 406 aaPredicted RBP16.63■□□□□ 0.25
LMO1-201ENST00000335790 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
LMO1-201ENST00000335790 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
LMO1-201ENST00000335790 DNAJC10Q8IXB1 793 aa16.63■□□□□ 0.25
LMO1-201ENST00000335790 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
LMO1-201ENST00000335790 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
LMO1-201ENST00000335790 ATRNO75882 1429 aa16.62■□□□□ 0.25
LMO1-201ENST00000335790 H7C1W4 665 aa16.62■□□□□ 0.25
LMO1-201ENST00000335790 APBB1O00213 710 aa16.62■□□□□ 0.25
LMO1-201ENST00000335790 STARD3NLO95772 234 aa16.62■□□□□ 0.25
LMO1-201ENST00000335790 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
LMO1-201ENST00000335790 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
LMO1-201ENST00000335790 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
LMO1-201ENST00000335790 MFAP1P55081 439 aaKnown RBP16.61■□□□□ 0.25
LMO1-201ENST00000335790 CCDC191Q8NCU4 936 aa16.61■□□□□ 0.25
LMO1-201ENST00000335790 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
LMO1-201ENST00000335790 AK9Q5TCS8 1911 aa16.6■□□□□ 0.25
LMO1-201ENST00000335790 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
LMO1-201ENST00000335790 DEFB132Q7Z7B7 95 aa16.6■□□□□ 0.25
LMO1-201ENST00000335790 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
LMO1-201ENST00000335790 PRIM1P49642 420 aaKnown RBP16.59■□□□□ 0.25
LMO1-201ENST00000335790 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
LMO1-201ENST00000335790 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
LMO1-201ENST00000335790 EP400Q96L91 3159 aa16.58■□□□□ 0.24
LMO1-201ENST00000335790 A0A087WZG4 1122 aa16.58■□□□□ 0.24
LMO1-201ENST00000335790 RFX5P48382 616 aaPredicted RBP16.58■□□□□ 0.24
LMO1-201ENST00000335790 TCIRG1Q13488 830 aa16.58■□□□□ 0.24
LMO1-201ENST00000335790 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
LMO1-201ENST00000335790 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
LMO1-201ENST00000335790 COL5A3P25940 1745 aaPredicted RBP16.58■□□□□ 0.24
LMO1-201ENST00000335790 NUP98P52948 1817 aa16.58■□□□□ 0.24
LMO1-201ENST00000335790 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.24
LMO1-201ENST00000335790 SF3B2Q13435 895 aaKnown RBP16.57■□□□□ 0.24
LMO1-201ENST00000335790 BECN1Q14457 450 aa16.57■□□□□ 0.24
LMO1-201ENST00000335790 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
LMO1-201ENST00000335790 GJD4Q96KN9 370 aaPredicted RBP16.57■□□□□ 0.24
LMO1-201ENST00000335790 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
LMO1-201ENST00000335790 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
LMO1-201ENST00000335790 MAP3K15Q6ZN16 1313 aa16.56■□□□□ 0.24
LMO1-201ENST00000335790 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
LMO1-201ENST00000335790 SASH1O94885 1247 aa16.56■□□□□ 0.24
LMO1-201ENST00000335790 IL6STP40189 918 aaPredicted RBP16.56■□□□□ 0.24
LMO1-201ENST00000335790 FOXO4P98177 505 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms