RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
CLSTN3-202ENST00000331148 LTV1Q96GA3 475 aaPredicted RBP21.72■■□□□ 1.07
CLSTN3-202ENST00000331148 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
CLSTN3-202ENST00000331148 PLCB2Q00722 1185 aa21.71■■□□□ 1.07
CLSTN3-202ENST00000331148 TPRNQ4KMQ1 711 aa21.71■■□□□ 1.07
CLSTN3-202ENST00000331148 ZSCAN22P10073 491 aaPredicted RBP21.7■■□□□ 1.06
CLSTN3-202ENST00000331148 ARHGEF25Q86VW2 580 aa21.7■■□□□ 1.06
CLSTN3-202ENST00000331148 ALS2Q96Q42 1657 aa21.7■■□□□ 1.06
CLSTN3-202ENST00000331148 KLHL34Q8N239 644 aa21.69■■□□□ 1.06
CLSTN3-202ENST00000331148 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
CLSTN3-202ENST00000331148 GIMAP6Q6P9H5 292 aa21.68■■□□□ 1.06
CLSTN3-202ENST00000331148 RILPL2Q969X0 211 aa21.68■■□□□ 1.06
CLSTN3-202ENST00000331148 FEZ1Q99689 392 aa21.68■■□□□ 1.06
CLSTN3-202ENST00000331148 SLAIN2Q9P270 581 aa21.68■■□□□ 1.06
CLSTN3-202ENST00000331148 TRIM6-TRIM34B2RNG4 842 aa21.67■■□□□ 1.06
CLSTN3-202ENST00000331148 BRINP3Q76B58 766 aa21.67■■□□□ 1.06
CLSTN3-202ENST00000331148 SPC24Q8NBT2 197 aa21.67■■□□□ 1.06
CLSTN3-202ENST00000331148 GOLGA6L6A8MZA4 724 aa21.66■■□□□ 1.06
CLSTN3-202ENST00000331148 FIBPO43427 364 aa21.66■■□□□ 1.06
CLSTN3-202ENST00000331148 LRRCC1Q9C099 1032 aa21.66■■□□□ 1.06
CLSTN3-202ENST00000331148 TCHHQ07283 1943 aa21.66■■□□□ 1.06
CLSTN3-202ENST00000331148 CHL1O00533 1208 aa21.66■■□□□ 1.06
CLSTN3-202ENST00000331148 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
CLSTN3-202ENST00000331148 STX6O43752 255 aa21.65■■□□□ 1.06
CLSTN3-202ENST00000331148 HSPA4P34932 840 aa21.65■■□□□ 1.06
CLSTN3-202ENST00000331148 FGD1P98174 961 aa21.65■■□□□ 1.06
CLSTN3-202ENST00000331148 F13A1P00488 732 aa21.64■■□□□ 1.06
CLSTN3-202ENST00000331148 NCBP1Q09161 790 aaKnown RBP21.64■■□□□ 1.06
CLSTN3-202ENST00000331148 OGFRQ9NZT2 677 aa21.64■■□□□ 1.06
CLSTN3-202ENST00000331148 PXDNQ92626 1479 aa21.64■■□□□ 1.05
CLSTN3-202ENST00000331148 SYT1P21579 422 aa21.64■■□□□ 1.05
CLSTN3-202ENST00000331148 IGSF3O75054 1194 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 UNC5CLQ8IV45 518 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 IL25Q9H293 177 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 EPB41L2O43491 1005 aaKnown RBP21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 SLC4A10Q6U841 1118 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 STAP2Q9UGK3 403 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 ATP6V1DQ9Y5K8 247 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 SPATA31A3Q5VYP0 1347 aa21.63■■□□□ 1.05
CLSTN3-202ENST00000331148 MED1Q15648 1581 aaPredicted RBP21.62■■□□□ 1.05
CLSTN3-202ENST00000331148 GNAI2P04899 355 aa21.62■■□□□ 1.05
CLSTN3-202ENST00000331148 CCT4P50991 539 aaKnown RBP21.62■■□□□ 1.05
CLSTN3-202ENST00000331148 NBPF6Q5VWK0 638 aa21.62■■□□□ 1.05
CLSTN3-202ENST00000331148 NBPF4Q96M43 638 aa21.62■■□□□ 1.05
CLSTN3-202ENST00000331148 SYCP1Q15431 976 aa21.62■■□□□ 1.05
CLSTN3-202ENST00000331148 TAF3Q5VWG9 929 aa21.61■■□□□ 1.05
CLSTN3-202ENST00000331148 MCM10Q7L590 875 aa21.61■■□□□ 1.05
CLSTN3-202ENST00000331148 F6X3S4 739 aa21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 PTGS1P23219 599 aa21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 ZC3H6P61129 1189 aaKnown RBP21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 USHBP1Q8N6Y0 703 aa21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 RTF1Q92541 710 aaKnown RBP21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 TTC14Q96N46 770 aa21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 CCDC192P0DO97 292 aa21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.6■■□□□ 1.05
CLSTN3-202ENST00000331148 CTNNA3Q9UI47 895 aa21.59■■□□□ 1.05
CLSTN3-202ENST00000331148 ZNF771Q7L3S4 317 aaPredicted RBP21.59■■□□□ 1.05
CLSTN3-202ENST00000331148 G2E3Q7L622 706 aa21.59■■□□□ 1.05
CLSTN3-202ENST00000331148 SMC3Q9UQE7 1217 aa21.59■■□□□ 1.05
CLSTN3-202ENST00000331148 AXIN2Q9Y2T1 843 aa21.59■■□□□ 1.05
CLSTN3-202ENST00000331148 LTBP4Q8N2S1 1624 aa21.59■■□□□ 1.05
CLSTN3-202ENST00000331148 SMTNL1A8MU46 457 aa21.58■■□□□ 1.05
CLSTN3-202ENST00000331148 AK2P54819 239 aa21.58■■□□□ 1.05
CLSTN3-202ENST00000331148 RUFY3Q7L099 469 aa21.58■■□□□ 1.05
CLSTN3-202ENST00000331148 ANKRD24Q8TF21 1146 aa21.58■■□□□ 1.05
CLSTN3-202ENST00000331148 AOX1Q06278 1338 aa21.58■■□□□ 1.04
CLSTN3-202ENST00000331148 RAD50Q92878 1312 aa21.58■■□□□ 1.04
CLSTN3-202ENST00000331148 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.04
CLSTN3-202ENST00000331148 GABPB1Q06547 395 aaPredicted RBP21.58■■□□□ 1.04
CLSTN3-202ENST00000331148 LIMCH1Q9UPQ0 1083 aa21.58■■□□□ 1.04
CLSTN3-202ENST00000331148 SNX14Q9Y5W7 946 aa21.58■■□□□ 1.04
CLSTN3-202ENST00000331148 DNM1Q05193 864 aaKnown RBP21.57■■□□□ 1.04
CLSTN3-202ENST00000331148 FAM200AQ8TCP9 573 aa21.57■■□□□ 1.04
CLSTN3-202ENST00000331148 LRRC59Q96AG4 307 aaKnown RBP21.57■■□□□ 1.04
CLSTN3-202ENST00000331148 PNMA6EA0A0J9YXQ4 647 aa21.57■■□□□ 1.04
CLSTN3-202ENST00000331148 CABLES1Q8TDN4 633 aa21.57■■□□□ 1.04
CLSTN3-202ENST00000331148 SOS2Q07890 1332 aaPredicted RBP21.56■■□□□ 1.04
CLSTN3-202ENST00000331148 GNAT3A8MTJ3 354 aa21.55■■□□□ 1.04
CLSTN3-202ENST00000331148 C16orf45Q96MC5 204 aaPredicted RBP21.55■■□□□ 1.04
CLSTN3-202ENST00000331148 LARP6Q9BRS8 491 aaKnown RBP21.55■■□□□ 1.04
CLSTN3-202ENST00000331148 CGNQ9P2M7 1197 aaKnown RBP21.55■■□□□ 1.04
CLSTN3-202ENST00000331148 RGPD2P0DJD1 1756 aa21.55■■□□□ 1.04
CLSTN3-202ENST00000331148 DDX41Q9UJV9 622 aaKnown RBP21.54■■□□□ 1.04
CLSTN3-202ENST00000331148 MTMR6Q9Y217 621 aa21.54■■□□□ 1.04
CLSTN3-202ENST00000331148 CRB1P82279 1406 aa21.54■■□□□ 1.04
CLSTN3-202ENST00000331148 ATP8B2P98198 1209 aa21.54■■□□□ 1.04
CLSTN3-202ENST00000331148 LRMPQ12912 555 aa21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 CCDC186Q7Z3E2 898 aa21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 BBXQ8WY36 941 aaPredicted RBP21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 MRVI1Q9Y6F6 885 aa21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 LARGE1O95461 756 aa21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 GTF2E1P29083 439 aaPredicted RBP21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 RASEFQ8IZ41 740 aa21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 ABCC6O95255 1503 aa21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 RGPD5Q99666 1765 aa21.53■■□□□ 1.04
CLSTN3-202ENST00000331148 SGSM2O43147 1006 aa21.52■■□□□ 1.04
CLSTN3-202ENST00000331148 GNAI3P08754 354 aa21.52■■□□□ 1.04
CLSTN3-202ENST00000331148 GJB2P29033 226 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms