RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 LRRN4CLQ8ND94 238 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
RGPD6-202ENST00000330331 TNMDQ9H2S6 317 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 STK26Q9P289 416 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 MTMR6Q9Y217 621 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 NRXN3Q9Y4C0 1643 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 LRRC7Q96NW7 1537 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 GJB2P29033 226 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 PLA2G4AP47712 749 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 RUFY3Q7L099 469 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 CCDC83Q8IWF9 413 aa17.99■□□□□ 0.47
RGPD6-202ENST00000330331 CCDC171Q6TFL3 1326 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 TTC6Q86TZ1 520 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 NFATC2IPQ8NCF5 419 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
RGPD6-202ENST00000330331 ADAMTSL3P82987 1691 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 PTPRMP28827 1452 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 SKILP12757 684 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 SYT10Q6XYQ8 523 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 NYAP1Q6ZVC0 841 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.98■□□□□ 0.47
RGPD6-202ENST00000330331 DNAJC25Q9H1X3 360 aa17.98■□□□□ 0.47
RGPD6-202ENST00000330331 CLCN6P51797 869 aa17.97■□□□□ 0.47
RGPD6-202ENST00000330331 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
RGPD6-202ENST00000330331 FERMT3Q86UX7 667 aa17.97■□□□□ 0.47
RGPD6-202ENST00000330331 C10orf67Q8IYJ2 551 aa17.97■□□□□ 0.47
RGPD6-202ENST00000330331 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
RGPD6-202ENST00000330331 TRIM66O15016 1216 aa17.97■□□□□ 0.47
RGPD6-202ENST00000330331 KRBA2Q6ZNG9 492 aa17.97■□□□□ 0.47
RGPD6-202ENST00000330331 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
RGPD6-202ENST00000330331 HMMRO75330 724 aa17.96■□□□□ 0.47
RGPD6-202ENST00000330331 PNMA6AP0CW24 399 aaPredicted RBP17.96■□□□□ 0.47
RGPD6-202ENST00000330331 HSPA4P34932 840 aa17.96■□□□□ 0.47
RGPD6-202ENST00000330331 LIMCH1Q9UPQ0 1083 aa17.96■□□□□ 0.47
RGPD6-202ENST00000330331 MAP4K4O95819 1239 aaPredicted RBP17.96■□□□□ 0.47
RGPD6-202ENST00000330331 ZNF165P49910 485 aa17.96■□□□□ 0.47
RGPD6-202ENST00000330331 RASSF4Q9H2L5 321 aa17.96■□□□□ 0.47
RGPD6-202ENST00000330331 H2AFXP16104 143 aaPredicted RBP17.95■□□□□ 0.46
RGPD6-202ENST00000330331 TDRD7Q8NHU6 1098 aaKnown RBP17.95■□□□□ 0.46
RGPD6-202ENST00000330331 GYS2P54840 703 aa17.95■□□□□ 0.46
RGPD6-202ENST00000330331 ST5P78524 1137 aa17.95■□□□□ 0.46
RGPD6-202ENST00000330331 FILIP1Q7Z7B0 1213 aa17.95■□□□□ 0.46
RGPD6-202ENST00000330331 LCMT1Q9UIC8 334 aa17.95■□□□□ 0.46
RGPD6-202ENST00000330331 SNX14Q9Y5W7 946 aa17.95■□□□□ 0.46
RGPD6-202ENST00000330331 PTPRCP08575 1304 aa17.95■□□□□ 0.46
RGPD6-202ENST00000330331 SLC4A10Q6U841 1118 aa17.94■□□□□ 0.46
RGPD6-202ENST00000330331 RASEFQ8IZ41 740 aa17.94■□□□□ 0.46
RGPD6-202ENST00000330331 TTC14Q96N46 770 aa17.94■□□□□ 0.46
RGPD6-202ENST00000330331 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
RGPD6-202ENST00000330331 TEX2Q8IWB9 1127 aa17.94■□□□□ 0.46
RGPD6-202ENST00000330331 SECISBP2LQ93073 1101 aaKnown RBP17.94■□□□□ 0.46
RGPD6-202ENST00000330331 TEX35Q5T0J7 233 aa17.94■□□□□ 0.46
RGPD6-202ENST00000330331 EFCC1Q9HA90 598 aa17.94■□□□□ 0.46
RGPD6-202ENST00000330331 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
RGPD6-202ENST00000330331 ZCCHC17Q9NP64 241 aaKnown RBP17.93■□□□□ 0.46
RGPD6-202ENST00000330331 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
RGPD6-202ENST00000330331 CCDC69A6NI79 296 aa17.93■□□□□ 0.46
RGPD6-202ENST00000330331 SMARCE1Q969G3 411 aa17.93■□□□□ 0.46
RGPD6-202ENST00000330331 TFIP11Q9UBB9 837 aaKnown RBP17.93■□□□□ 0.46
RGPD6-202ENST00000330331 SALL3Q9BXA9 1300 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 GOLGA6L4A6NEF3 574 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 LTKP29376 864 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 ARHGAP29Q52LW3 1261 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
RGPD6-202ENST00000330331 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 POLKQ9UBT6 870 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 LRRFIP2Q9Y608 721 aaKnown RBP17.92■□□□□ 0.46
RGPD6-202ENST00000330331 GORABQ5T7V8 394 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 LRRCC1Q9C099 1032 aa17.92■□□□□ 0.46
RGPD6-202ENST00000330331 NOP2P46087 812 aaKnown RBP17.91■□□□□ 0.46
RGPD6-202ENST00000330331 RNF20Q5VTR2 975 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
RGPD6-202ENST00000330331 IL17RAQ96F46 866 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 SSH2Q76I76 1423 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 F6X3S4 739 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
RGPD6-202ENST00000330331 KRT85P78386 507 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 TXLNBQ8N3L3 684 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 CCDC191Q8NCU4 936 aa17.91■□□□□ 0.46
RGPD6-202ENST00000330331 SLIT1O75093 1534 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 MYO1CO00159 1063 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 CCZ1BP86790 482 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 CCZ1P86791 482 aaPredicted RBP17.9■□□□□ 0.46
RGPD6-202ENST00000330331 NECAB1Q8N987 351 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
RGPD6-202ENST00000330331 TXNDC2Q86VQ3 553 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 METP08581 1390 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 GOLGA6L19H0YKK7 550 aa17.9■□□□□ 0.46
RGPD6-202ENST00000330331 SEC31AO94979 1220 aaKnown RBP17.9■□□□□ 0.46
RGPD6-202ENST00000330331 ARHGAP23Q9P227 1491 aa17.89■□□□□ 0.45
RGPD6-202ENST00000330331 CEP170BQ9Y4F5 1589 aaPredicted RBP17.89■□□□□ 0.45
RGPD6-202ENST00000330331 NR1I2O75469 434 aa17.89■□□□□ 0.45
RGPD6-202ENST00000330331 GTF2A1P52655 376 aaPredicted RBP17.89■□□□□ 0.45
RGPD6-202ENST00000330331 TPM4P67936 248 aa17.89■□□□□ 0.45
RGPD6-202ENST00000330331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.89■□□□□ 0.45
RGPD6-202ENST00000330331 THEMISQ8N1K5 641 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms