RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
ABCF1-201ENST00000326195 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 OVOS2A0A0G2JMS6 1433 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 SNRPA1P09661 255 aaKnown RBP12.64□□□□□ -0.39
ABCF1-201ENST00000326195 TERF1P54274 439 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 CCDC30Q5VVM6 783 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 MAP7D2Q96T17 732 aa12.64□□□□□ -0.39
ABCF1-201ENST00000326195 PI4KAP2A4QPH2 592 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 ERVV-2B6SEH9 535 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 PI4KAP1Q8N8J0 262 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 TSC1Q92574 1164 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 SLC4A9Q96Q91 983 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 IQSEC2Q5JU85 1478 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 DMTNQ08495 405 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 TTLL7Q6ZT98 887 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
ABCF1-201ENST00000326195 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
ABCF1-201ENST00000326195 CD2BP2O95400 341 aaKnown RBP12.62□□□□□ -0.39
ABCF1-201ENST00000326195 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
ABCF1-201ENST00000326195 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
ABCF1-201ENST00000326195 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
ABCF1-201ENST00000326195 GNPATO15228 680 aa12.62□□□□□ -0.39
ABCF1-201ENST00000326195 TRIM27P14373 513 aa12.62□□□□□ -0.39
ABCF1-201ENST00000326195 ITPK1Q13572 414 aa12.61□□□□□ -0.39
ABCF1-201ENST00000326195 PPP1R1BQ9UD71 204 aaPredicted RBP12.61□□□□□ -0.39
ABCF1-201ENST00000326195 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
ABCF1-201ENST00000326195 FLIIQ13045 1269 aa12.61□□□□□ -0.39
ABCF1-201ENST00000326195 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
ABCF1-201ENST00000326195 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
ABCF1-201ENST00000326195 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
ABCF1-201ENST00000326195 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
ABCF1-201ENST00000326195 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
ABCF1-201ENST00000326195 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
ABCF1-201ENST00000326195 STARD3NLO95772 234 aa12.6□□□□□ -0.39
ABCF1-201ENST00000326195 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
ABCF1-201ENST00000326195 NOL7Q9UMY1 257 aaKnown RBP12.6□□□□□ -0.39
ABCF1-201ENST00000326195 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
ABCF1-201ENST00000326195 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
ABCF1-201ENST00000326195 SSFA2P28290 1259 aa12.6□□□□□ -0.39
ABCF1-201ENST00000326195 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
ABCF1-201ENST00000326195 ZNF500O60304 480 aaPredicted RBP12.59□□□□□ -0.39
ABCF1-201ENST00000326195 EZH2Q15910 746 aaKnown RBP12.59□□□□□ -0.39
ABCF1-201ENST00000326195 MYD88Q99836 296 aa12.59□□□□□ -0.39
ABCF1-201ENST00000326195 MAP3K2Q9Y2U5 619 aa12.59□□□□□ -0.39
ABCF1-201ENST00000326195 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
ABCF1-201ENST00000326195 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
ABCF1-201ENST00000326195 NBPF26B4DH59 902 aa12.58□□□□□ -0.39
ABCF1-201ENST00000326195 NBPF14Q5TI25 921 aa12.58□□□□□ -0.39
ABCF1-201ENST00000326195 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.39
ABCF1-201ENST00000326195 NBPF15Q8N660 670 aa12.58□□□□□ -0.39
ABCF1-201ENST00000326195 SRP68Q9UHB9 627 aaKnown RBP12.58□□□□□ -0.39
ABCF1-201ENST00000326195 IL16Q14005 1332 aa12.58□□□□□ -0.4
ABCF1-201ENST00000326195 COL18A1P39060 1754 aa12.58□□□□□ -0.4
ABCF1-201ENST00000326195 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
ABCF1-201ENST00000326195 ANKRD45Q5TZF3 282 aa12.58□□□□□ -0.4
ABCF1-201ENST00000326195 CBX1P83916 185 aa12.58□□□□□ -0.4
ABCF1-201ENST00000326195 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
ABCF1-201ENST00000326195 GBP4Q96PP9 640 aa12.58□□□□□ -0.4
ABCF1-201ENST00000326195 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
ABCF1-201ENST00000326195 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
ABCF1-201ENST00000326195 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
ABCF1-201ENST00000326195 DYNC1I1O14576 645 aa12.57□□□□□ -0.4
ABCF1-201ENST00000326195 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
ABCF1-201ENST00000326195 AK7Q96M32 723 aa12.57□□□□□ -0.4
ABCF1-201ENST00000326195 CCDC94Q9BW85 323 aaPredicted RBP12.57□□□□□ -0.4
ABCF1-201ENST00000326195 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
ABCF1-201ENST00000326195 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
ABCF1-201ENST00000326195 SKOR2Q2VWA4 1001 aaPredicted RBP12.57□□□□□ -0.4
ABCF1-201ENST00000326195 PPP4R3BQ5MIZ7 849 aa12.57□□□□□ -0.4
ABCF1-201ENST00000326195 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
ABCF1-201ENST00000326195 SYNE4Q8N205 404 aa12.57□□□□□ -0.4
ABCF1-201ENST00000326195 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
ABCF1-201ENST00000326195 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
ABCF1-201ENST00000326195 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
ABCF1-201ENST00000326195 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
ABCF1-201ENST00000326195 C9orf78Q9NZ63 289 aaPredicted RBP12.56□□□□□ -0.4
ABCF1-201ENST00000326195 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
ABCF1-201ENST00000326195 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
ABCF1-201ENST00000326195 PDGFDQ9GZP0 370 aaPredicted RBP12.56□□□□□ -0.4
ABCF1-201ENST00000326195 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
ABCF1-201ENST00000326195 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
ABCF1-201ENST00000326195 KIF2CQ99661 725 aa12.55□□□□□ -0.4
ABCF1-201ENST00000326195 IGSF3O75054 1194 aa12.55□□□□□ -0.4
ABCF1-201ENST00000326195 ILDR2Q71H61 639 aa12.55□□□□□ -0.4
ABCF1-201ENST00000326195 HLFQ16534 295 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 ATP2B3Q16720 1220 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
ABCF1-201ENST00000326195 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 ATRNO75882 1429 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 CAVIN1Q6NZI2 390 aaKnown RBP12.54□□□□□ -0.4
ABCF1-201ENST00000326195 MEIS3Q99687 375 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 NCLP19338 710 aaKnown RBP12.54□□□□□ -0.4
ABCF1-201ENST00000326195 LMO7Q8WWI1 1683 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 TMEM51Q9NW97 253 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 HEG1Q9ULI3 1381 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms