RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 PLBD2Q8NHP8 589 aa19.64■□□□□ 0.74
CALR-201ENST00000316448 TEX13AQ9BXU3 409 aaPredicted RBP19.64■□□□□ 0.74
CALR-201ENST00000316448 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.73
CALR-201ENST00000316448 TRPC5Q9UL62 973 aaPredicted RBP19.63■□□□□ 0.73
CALR-201ENST00000316448 ATP5J2-PTCD1G3V325 749 aa19.63■□□□□ 0.73
CALR-201ENST00000316448 KAZALD1Q96I82 304 aa19.63■□□□□ 0.73
CALR-201ENST00000316448 IPO9Q96P70 1041 aaKnown RBP19.63■□□□□ 0.73
CALR-201ENST00000316448 QTRT2Q9H974 415 aaKnown RBP19.63■□□□□ 0.73
CALR-201ENST00000316448 UTYO14607 1347 aa19.62■□□□□ 0.73
CALR-201ENST00000316448 STARD3NLO95772 234 aa19.62■□□□□ 0.73
CALR-201ENST00000316448 GCKRQ14397 625 aa19.62■□□□□ 0.73
CALR-201ENST00000316448 JARID2Q92833 1246 aaPredicted RBP19.62■□□□□ 0.73
CALR-201ENST00000316448 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
CALR-201ENST00000316448 GRM8O00222 908 aa19.61■□□□□ 0.73
CALR-201ENST00000316448 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
CALR-201ENST00000316448 ZBTB3Q9H5J0 574 aa19.61■□□□□ 0.73
CALR-201ENST00000316448 TJP1Q07157 1748 aa19.61■□□□□ 0.73
CALR-201ENST00000316448 SMARCA5O60264 1052 aaPredicted RBP19.61■□□□□ 0.73
CALR-201ENST00000316448 ITPK1Q13572 414 aa19.61■□□□□ 0.73
CALR-201ENST00000316448 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
CALR-201ENST00000316448 SUCLG2Q96I99 432 aa19.61■□□□□ 0.73
CALR-201ENST00000316448 ZBTB1Q9Y2K1 713 aa19.61■□□□□ 0.73
CALR-201ENST00000316448 ARFGEF2Q9Y6D5 1785 aa19.6■□□□□ 0.73
CALR-201ENST00000316448 HMMRO75330 724 aa19.6■□□□□ 0.73
CALR-201ENST00000316448 NEXNQ0ZGT2 675 aa19.6■□□□□ 0.73
CALR-201ENST00000316448 POLA2Q14181 598 aa19.6■□□□□ 0.73
CALR-201ENST00000316448 SSH3Q8TE77 659 aa19.6■□□□□ 0.73
CALR-201ENST00000316448 LOC102724428A0A0B4J2F2 783 aa19.59■□□□□ 0.73
CALR-201ENST00000316448 APBB1O00213 710 aa19.59■□□□□ 0.73
CALR-201ENST00000316448 SIK1P57059 783 aa19.59■□□□□ 0.73
CALR-201ENST00000316448 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
CALR-201ENST00000316448 EXOC6BQ9Y2D4 811 aa19.59■□□□□ 0.73
CALR-201ENST00000316448 ZNF330Q9Y3S2 320 aaPredicted RBP19.59■□□□□ 0.73
CALR-201ENST00000316448 PALLDQ8WX93 1383 aa19.59■□□□□ 0.73
CALR-201ENST00000316448 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
CALR-201ENST00000316448 ATP6V1AP38606 617 aa19.58■□□□□ 0.72
CALR-201ENST00000316448 INTS5Q6P9B9 1019 aaKnown RBP19.58■□□□□ 0.72
CALR-201ENST00000316448 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
CALR-201ENST00000316448 NUP188Q5SRE5 1749 aa19.57■□□□□ 0.72
CALR-201ENST00000316448 EPHA10Q5JZY3 1008 aa19.57■□□□□ 0.72
CALR-201ENST00000316448 OTUD7AQ8TE49 926 aaPredicted RBP19.57■□□□□ 0.72
CALR-201ENST00000316448 SRGAP3O43295 1099 aa19.56■□□□□ 0.72
CALR-201ENST00000316448 CASP7P55210 303 aa19.56■□□□□ 0.72
CALR-201ENST00000316448 KCNQ4P56696 695 aa19.56■□□□□ 0.72
CALR-201ENST00000316448 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
CALR-201ENST00000316448 MTX1Q13505 466 aa19.55■□□□□ 0.72
CALR-201ENST00000316448 BICC1Q9H694 974 aaKnown RBP19.55■□□□□ 0.72
CALR-201ENST00000316448 HLFQ16534 295 aa19.55■□□□□ 0.72
CALR-201ENST00000316448 SMARCC1Q92922 1105 aaPredicted RBP19.55■□□□□ 0.72
CALR-201ENST00000316448 CRKLP46109 303 aaKnown RBP19.54■□□□□ 0.72
CALR-201ENST00000316448 PLEKHM2Q8IWE5 1019 aa19.54■□□□□ 0.72
CALR-201ENST00000316448 ISCA1Q9BUE6 129 aa19.54■□□□□ 0.72
CALR-201ENST00000316448 A0A087WZG4 1122 aa19.53■□□□□ 0.72
CALR-201ENST00000316448 NOP58Q9Y2X3 529 aaKnown RBP19.53■□□□□ 0.72
CALR-201ENST00000316448 H7C1W4 665 aa19.53■□□□□ 0.72
CALR-201ENST00000316448 TCIRG1Q13488 830 aa19.53■□□□□ 0.72
CALR-201ENST00000316448 UBE3BQ7Z3V4 1068 aa19.53■□□□□ 0.72
CALR-201ENST00000316448 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
CALR-201ENST00000316448 MAP3K15Q6ZN16 1313 aa19.52■□□□□ 0.72
CALR-201ENST00000316448 IL6STP40189 918 aaPredicted RBP19.52■□□□□ 0.72
CALR-201ENST00000316448 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
CALR-201ENST00000316448 ARXQ96QS3 562 aa19.52■□□□□ 0.72
CALR-201ENST00000316448 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
CALR-201ENST00000316448 SURF6O75683 361 aaKnown RBP19.51■□□□□ 0.71
CALR-201ENST00000316448 SEC24BO95487 1268 aa19.51■□□□□ 0.71
CALR-201ENST00000316448 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
CALR-201ENST00000316448 PA2G4Q9UQ80 394 aaKnown RBP19.51■□□□□ 0.71
CALR-201ENST00000316448 MYH14Q7Z406 1995 aaKnown RBP19.51■□□□□ 0.71
CALR-201ENST00000316448 KIF6Q6ZMV9 814 aa19.51■□□□□ 0.71
CALR-201ENST00000316448 LINC00116Q8NCU8 138 aa19.51■□□□□ 0.71
CALR-201ENST00000316448 CWC25Q9NXE8 425 aaPredicted RBP19.51■□□□□ 0.71
CALR-201ENST00000316448 RTL5Q5HYW3 569 aaPredicted RBP19.5■□□□□ 0.71
CALR-201ENST00000316448 GIGYF2Q6Y7W6 1299 aaKnown RBP19.49■□□□□ 0.71
CALR-201ENST00000316448 CCDC191Q8NCU4 936 aa19.49■□□□□ 0.71
CALR-201ENST00000316448 NHSQ6T4R5 1651 aa19.49■□□□□ 0.71
CALR-201ENST00000316448 TRIM28Q13263 835 aaKnown RBP19.49■□□□□ 0.71
CALR-201ENST00000316448 DDRGK1Q96HY6 314 aa19.49■□□□□ 0.71
CALR-201ENST00000316448 LRRCC1Q9C099 1032 aa19.49■□□□□ 0.71
CALR-201ENST00000316448 HDAC5Q9UQL6 1122 aa19.49■□□□□ 0.71
CALR-201ENST00000316448 BTAF1O14981 1849 aa19.49■□□□□ 0.71
CALR-201ENST00000316448 CICQ96RK0 1608 aaPredicted RBP19.48■□□□□ 0.71
CALR-201ENST00000316448 FOXO4P98177 505 aa19.48■□□□□ 0.71
CALR-201ENST00000316448 DZIP3Q86Y13 1208 aaKnown RBP19.48■□□□□ 0.71
CALR-201ENST00000316448 RREB1Q92766 1687 aa19.48■□□□□ 0.71
CALR-201ENST00000316448 RABL6Q3YEC7 729 aaPredicted RBP19.47■□□□□ 0.71
CALR-201ENST00000316448 BMP2KLQ5H9B9 411 aa19.47■□□□□ 0.71
CALR-201ENST00000316448 KLHDC4Q8TBB5 520 aa19.47■□□□□ 0.71
CALR-201ENST00000316448 IL1RAPL2Q9NP60 686 aa19.47■□□□□ 0.71
CALR-201ENST00000316448 SALL3Q9BXA9 1300 aa19.47■□□□□ 0.71
CALR-201ENST00000316448 COL15A1P39059 1388 aa19.47■□□□□ 0.71
CALR-201ENST00000316448 SBF2Q86WG5 1849 aa19.47■□□□□ 0.71
CALR-201ENST00000316448 GSPT1P15170 499 aaKnown RBP19.47■□□□□ 0.71
CALR-201ENST00000316448 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
CALR-201ENST00000316448 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
CALR-201ENST00000316448 GPTP24298 496 aa19.46■□□□□ 0.71
CALR-201ENST00000316448 RFX5P48382 616 aaPredicted RBP19.46■□□□□ 0.71
CALR-201ENST00000316448 SYNE4Q8N205 404 aa19.46■□□□□ 0.71
CALR-201ENST00000316448 RHPN1Q8TCX5 695 aa19.46■□□□□ 0.71
CALR-201ENST00000316448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.46■□□□□ 0.71
CALR-201ENST00000316448 RAB11FIP3O75154 756 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms