RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 CCDC112Q8NEF3 446 aa24.07■■□□□ 1.44
SH3RF3-201ENST00000309415 RARSP54136 660 aaKnown RBP24.07■■□□□ 1.44
SH3RF3-201ENST00000309415 ARHGAP29Q52LW3 1261 aa24.07■■□□□ 1.44
SH3RF3-201ENST00000309415 LEKR1Q6ZMV7 388 aa24.07■■□□□ 1.44
SH3RF3-201ENST00000309415 CLEC11AQ9Y240 323 aa24.07■■□□□ 1.44
SH3RF3-201ENST00000309415 KLHL10Q6JEL2 608 aa24.06■■□□□ 1.44
SH3RF3-201ENST00000309415 UBE3BQ7Z3V4 1068 aa24.06■■□□□ 1.44
SH3RF3-201ENST00000309415 CAMK4Q16566 473 aa24.06■■□□□ 1.44
SH3RF3-201ENST00000309415 FILIP1Q7Z7B0 1213 aa24.06■■□□□ 1.44
SH3RF3-201ENST00000309415 GUCY1B3Q02153 619 aa24.06■■□□□ 1.44
SH3RF3-201ENST00000309415 CRNKL1Q9BZJ0 848 aaKnown RBP24.06■■□□□ 1.44
SH3RF3-201ENST00000309415 NPHP3Q7Z494 1330 aa24.06■■□□□ 1.44
SH3RF3-201ENST00000309415 NSD2O96028 1365 aa24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 SLC4A8Q2Y0W8 1093 aa24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 UQCRFS1P1P0C7P4 283 aa24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 SMARCC1Q92922 1105 aaPredicted RBP24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 PIK3R4Q99570 1358 aa24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 MPNDQ8N594 471 aa24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 SNRKQ9NRH2 765 aa24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 ABCC5O15440 1437 aa24.05■■□□□ 1.44
SH3RF3-201ENST00000309415 BACH2Q9BYV9 841 aa24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 SAMM50Q9Y512 469 aa24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 TMEM67Q5HYA8 995 aa24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 CALML4Q96GE6 196 aa24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 CUL7Q14999 1698 aa24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 MFSD6Q6ZSS7 791 aa24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 MTERF4Q7Z6M4 381 aaKnown RBP24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 CCDC148Q8NFR7 591 aa24.04■■□□□ 1.44
SH3RF3-201ENST00000309415 GRM1Q13255 1194 aa24.03■■□□□ 1.44
SH3RF3-201ENST00000309415 TRMT1LQ7Z2T5 733 aaKnown RBP24.03■■□□□ 1.44
SH3RF3-201ENST00000309415 PTPN23Q9H3S7 1636 aa24.03■■□□□ 1.44
SH3RF3-201ENST00000309415 ECHDC1Q9NTX5 307 aa24.03■■□□□ 1.44
SH3RF3-201ENST00000309415 FAM193AP78312 1265 aa24.02■■□□□ 1.44
SH3RF3-201ENST00000309415 POLD1P28340 1107 aa24.02■■□□□ 1.44
SH3RF3-201ENST00000309415 FERMT2Q96AC1 680 aa24.02■■□□□ 1.44
SH3RF3-201ENST00000309415 SCAND2PQ9GZW5 306 aaPredicted RBP24.02■■□□□ 1.44
SH3RF3-201ENST00000309415 C14orf93Q9H972 538 aaKnown RBP24.02■■□□□ 1.44
SH3RF3-201ENST00000309415 EIF3JO75822 258 aaKnown RBP24.02■■□□□ 1.44
SH3RF3-201ENST00000309415 CETN1Q12798 172 aa24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 OGFOD1Q8N543 542 aa24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 DDB1Q16531 1140 aa24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 TCP11L1Q9NUJ3 509 aa24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 PCF11O94913 1555 aaKnown RBP24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 CCT2P78371 535 aaKnown RBP24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 STXBP4Q6ZWJ1 553 aa24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 ANKRD13DQ6ZTN6 518 aa24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 ZGPATQ8N5A5 531 aaKnown RBP24.01■■□□□ 1.43
SH3RF3-201ENST00000309415 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
SH3RF3-201ENST00000309415 ANO10Q9NW15 660 aa24■■□□□ 1.43
SH3RF3-201ENST00000309415 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
SH3RF3-201ENST00000309415 PI4KAP2A4QPH2 592 aa24■■□□□ 1.43
SH3RF3-201ENST00000309415 AMPD3Q01432 767 aa24■■□□□ 1.43
SH3RF3-201ENST00000309415 C16orf71Q8IYS4 520 aaPredicted RBP24■■□□□ 1.43
SH3RF3-201ENST00000309415 PI4KAP1Q8N8J0 262 aa24■■□□□ 1.43
SH3RF3-201ENST00000309415 DHX29Q7Z478 1369 aaKnown RBP23.99■■□□□ 1.43
SH3RF3-201ENST00000309415 TTC21AQ8NDW8 1320 aa23.99■■□□□ 1.43
SH3RF3-201ENST00000309415 CCDC144CPQ8IYA2 1237 aa23.99■■□□□ 1.43
SH3RF3-201ENST00000309415 NLRP3Q96P20 1036 aa23.99■■□□□ 1.43
SH3RF3-201ENST00000309415 GOLGA6L7A0A1B0GV03 622 aa23.99■■□□□ 1.43
SH3RF3-201ENST00000309415 NBPF14Q5TI25 921 aa23.99■■□□□ 1.43
SH3RF3-201ENST00000309415 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
SH3RF3-201ENST00000309415 JARID2Q92833 1246 aaPredicted RBP23.98■■□□□ 1.43
SH3RF3-201ENST00000309415 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
SH3RF3-201ENST00000309415 CNNM3Q8NE01 707 aa23.98■■□□□ 1.43
SH3RF3-201ENST00000309415 PLEKHH1Q9ULM0 1364 aa23.98■■□□□ 1.43
SH3RF3-201ENST00000309415 F8W031 263 aaPredicted RBP23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 LIMCH1Q9UPQ0 1083 aa23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 KIAA0754O94854 1291 aa23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 NF2P35240 595 aa23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 SYCP3Q8IZU3 236 aa23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 NCOA7Q8NI08 942 aa23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 PPP4R3BQ5MIZ7 849 aa23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 USP16Q9Y5T5 823 aa23.97■■□□□ 1.43
SH3RF3-201ENST00000309415 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
SH3RF3-201ENST00000309415 VTI1AQ96AJ9 217 aa23.96■■□□□ 1.43
SH3RF3-201ENST00000309415 TSPY3P0CV98 308 aa23.96■■□□□ 1.43
SH3RF3-201ENST00000309415 TSPY8P0CW00 308 aa23.96■■□□□ 1.43
SH3RF3-201ENST00000309415 PARP3Q9Y6F1 533 aa23.96■■□□□ 1.43
SH3RF3-201ENST00000309415 HAND2P61296 217 aa23.96■■□□□ 1.43
SH3RF3-201ENST00000309415 GRPEL1Q9HAV7 217 aa23.96■■□□□ 1.43
SH3RF3-201ENST00000309415 NYXQ9GZU5 481 aa23.95■■□□□ 1.43
SH3RF3-201ENST00000309415 CA8P35219 290 aa23.95■■□□□ 1.42
SH3RF3-201ENST00000309415 METAP2P50579 478 aaKnown RBP eCLIP23.95■■□□□ 1.42
SH3RF3-201ENST00000309415 ZNF804AQ7Z570 1209 aa23.95■■□□□ 1.42
SH3RF3-201ENST00000309415 MBIPQ9NS73 344 aa23.95■■□□□ 1.42
SH3RF3-201ENST00000309415 CCDC178Q5BJE1 867 aa23.95■■□□□ 1.42
SH3RF3-201ENST00000309415 NIP7Q9Y221 180 aaKnown RBP eCLIP23.95■■□□□ 1.42
SH3RF3-201ENST00000309415 IDEP14735 1019 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 TRAF1Q13077 416 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 CTNNBL1Q8WYA6 563 aaPredicted RBP23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 TFCP2L1Q9NZI6 479 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 FAM83GA6ND36 823 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 ANKRD36BQ8N2N9 1353 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 CCDC40Q4G0X9 1142 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 TAF3Q5VWG9 929 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 MICU3Q86XE3 530 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 BICD1Q96G01 975 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 STX8Q9UNK0 236 aa23.94■■□□□ 1.42
SH3RF3-201ENST00000309415 CYP7A1P22680 504 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms