RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 DZIP1Q86YF9 867 aaKnown RBP17.76■□□□□ 0.43
LEMD3-201ENST00000308330 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 ZSCAN20P17040 1043 aaPredicted RBP17.76■□□□□ 0.43
LEMD3-201ENST00000308330 E2F4Q16254 413 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 NBPF6Q5VWK0 638 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
LEMD3-201ENST00000308330 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 NBPF4Q96M43 638 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 NAT10Q9H0A0 1025 aaKnown RBP17.76■□□□□ 0.43
LEMD3-201ENST00000308330 SMTNL1A8MU46 457 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 ZSCAN23Q3MJ62 389 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 TTC39AQ5SRH9 613 aa17.76■□□□□ 0.43
LEMD3-201ENST00000308330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
LEMD3-201ENST00000308330 RIOK3O14730 519 aaKnown RBP17.75■□□□□ 0.43
LEMD3-201ENST00000308330 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
LEMD3-201ENST00000308330 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
LEMD3-201ENST00000308330 CALR3Q96L12 384 aaKnown RBP17.75■□□□□ 0.43
LEMD3-201ENST00000308330 IGHMBP2P38935 993 aaKnown RBP17.75■□□□□ 0.43
LEMD3-201ENST00000308330 NSD2O96028 1365 aa17.75■□□□□ 0.43
LEMD3-201ENST00000308330 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
LEMD3-201ENST00000308330 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
LEMD3-201ENST00000308330 UVSSAQ2YD98 709 aa17.75■□□□□ 0.43
LEMD3-201ENST00000308330 ZBTB3Q9H5J0 574 aa17.75■□□□□ 0.43
LEMD3-201ENST00000308330 YEATS2Q9ULM3 1422 aa17.74■□□□□ 0.43
LEMD3-201ENST00000308330 IPO7O95373 1038 aaKnown RBP17.74■□□□□ 0.43
LEMD3-201ENST00000308330 FAM83GA6ND36 823 aa17.74■□□□□ 0.43
LEMD3-201ENST00000308330 TRIM29Q14134 588 aa17.74■□□□□ 0.43
LEMD3-201ENST00000308330 WDR66Q8TBY9 1149 aa17.74■□□□□ 0.43
LEMD3-201ENST00000308330 TTC12Q9H892 705 aaPredicted RBP17.74■□□□□ 0.43
LEMD3-201ENST00000308330 GPTP24298 496 aa17.74■□□□□ 0.43
LEMD3-201ENST00000308330 ZNF513Q8N8E2 541 aaPredicted RBP17.74■□□□□ 0.43
LEMD3-201ENST00000308330 DBF4Q9UBU7 674 aaPredicted RBP17.74■□□□□ 0.43
LEMD3-201ENST00000308330 LTKP29376 864 aa17.73■□□□□ 0.43
LEMD3-201ENST00000308330 MYD88Q99836 296 aa17.73■□□□□ 0.43
LEMD3-201ENST00000308330 TRMT112Q9UI30 125 aaKnown RBP17.73■□□□□ 0.43
LEMD3-201ENST00000308330 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
LEMD3-201ENST00000308330 EBAG9O00559 213 aa17.73■□□□□ 0.43
LEMD3-201ENST00000308330 SUFUQ9UMX1 484 aa17.73■□□□□ 0.43
LEMD3-201ENST00000308330 RBM5P52756 815 aaKnown RBP eCLIP17.73■□□□□ 0.43
LEMD3-201ENST00000308330 SLAIN2Q9P270 581 aa17.73■□□□□ 0.43
LEMD3-201ENST00000308330 SHANK2Q9UPX8 1470 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 MIPOL1Q8TD10 442 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 SSH1Q8WYL5 1049 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.72■□□□□ 0.43
LEMD3-201ENST00000308330 ANKRD36BQ8N2N9 1353 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
LEMD3-201ENST00000308330 IKQ13123 557 aaPredicted RBP17.72■□□□□ 0.43
LEMD3-201ENST00000308330 LRSAM1Q6UWE0 723 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 TEX13AQ9BXU3 409 aaPredicted RBP17.72■□□□□ 0.43
LEMD3-201ENST00000308330 TCEAL9Q9UHQ7 104 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.72■□□□□ 0.43
LEMD3-201ENST00000308330 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
LEMD3-201ENST00000308330 JAKMIP3Q5VZ66 844 aa17.71■□□□□ 0.43
LEMD3-201ENST00000308330 ARMCX6Q7L4S7 300 aa17.71■□□□□ 0.43
LEMD3-201ENST00000308330 IL1RAPL2Q9NP60 686 aa17.71■□□□□ 0.43
LEMD3-201ENST00000308330 MVPQ14764 893 aaKnown RBP17.71■□□□□ 0.43
LEMD3-201ENST00000308330 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
LEMD3-201ENST00000308330 F6X3S4 739 aa17.71■□□□□ 0.43
LEMD3-201ENST00000308330 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
LEMD3-201ENST00000308330 SLU7O95391 586 aaKnown RBP17.71■□□□□ 0.42
LEMD3-201ENST00000308330 CRACR2AQ9BSW2 395 aa17.71■□□□□ 0.42
LEMD3-201ENST00000308330 ARFGAP3Q9NP61 516 aa17.71■□□□□ 0.42
LEMD3-201ENST00000308330 URI1O94763 535 aaPredicted RBP17.7■□□□□ 0.42
LEMD3-201ENST00000308330 SSFA2P28290 1259 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 ABCC11Q96J66 1382 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 PPP1R9BQ96SB3 815 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 GOLGA6L9A6NEM1 432 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 CDC45O75419 566 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 YTHDC2Q9H6S0 1430 aaKnown RBP17.7■□□□□ 0.42
LEMD3-201ENST00000308330 FSD2A1L4K1 749 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 PIBF1Q8WXW3 757 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
LEMD3-201ENST00000308330 IL2RBP14784 551 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
LEMD3-201ENST00000308330 AACSQ86V21 672 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 RAI14Q9P0K7 980 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 GOPCQ9HD26 462 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
LEMD3-201ENST00000308330 RLBP1P12271 317 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
LEMD3-201ENST00000308330 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 MRFAP1L1Q96HT8 127 aa17.69■□□□□ 0.42
LEMD3-201ENST00000308330 ANXA1P04083 346 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.68■□□□□ 0.425e-6■■■■■ 34.6
LEMD3-201ENST00000308330 HYPKQ9NX55 129 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 ERLIN2O94905 339 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 RFC4P35249 363 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 SART3Q15020 963 aaKnown RBP17.68■□□□□ 0.42
LEMD3-201ENST00000308330 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 A0A087WZG4 1122 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 TESK2Q96S53 571 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 ABCF2Q9UG63 623 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 TMEM2Q9UHN6 1383 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 SNRPA1P09661 255 aaKnown RBP17.68■□□□□ 0.42
LEMD3-201ENST00000308330 PEX19P40855 299 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 HNRNPH2P55795 449 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms