RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SLC4A10Q6U841 1118 aa8.8□□□□□ -1
PTCD2-201ENST00000308077 CENPQQ7L2Z9 268 aaPredicted RBP8.8□□□□□ -1
PTCD2-201ENST00000308077 KRT27Q7Z3Y8 459 aa8.8□□□□□ -1
PTCD2-201ENST00000308077 LRP10Q7Z4F1 713 aa8.8□□□□□ -1
PTCD2-201ENST00000308077 DDX21Q9NR30 783 aaKnown RBP eCLIP8.8□□□□□ -1
PTCD2-201ENST00000308077 TJP1Q07157 1748 aa8.8□□□□□ -1
PTCD2-201ENST00000308077 PIP4K2AP48426 406 aaPredicted RBP8.8□□□□□ -1
PTCD2-201ENST00000308077 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
PTCD2-201ENST00000308077 ACSBG1Q96GR2 724 aa8.8□□□□□ -1
PTCD2-201ENST00000308077 C1orf115Q9H7X2 142 aa8.8□□□□□ -1
PTCD2-201ENST00000308077 SKAP1Q86WV1 359 aa8.79□□□□□ -1
PTCD2-201ENST00000308077 HYPKQ9NX55 129 aa8.79□□□□□ -1
PTCD2-201ENST00000308077 PI4KAP2A4QPH2 592 aa8.79□□□□□ -1
PTCD2-201ENST00000308077 MYL6BP14649 208 aa8.79□□□□□ -1
PTCD2-201ENST00000308077 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
PTCD2-201ENST00000308077 PI4KAP1Q8N8J0 262 aa8.79□□□□□ -1
PTCD2-201ENST00000308077 SLC4A9Q96Q91 983 aa8.79□□□□□ -1
PTCD2-201ENST00000308077 MEIS3Q99687 375 aa8.79□□□□□ -1
PTCD2-201ENST00000308077 NBPF26B4DH59 902 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 PTGER2P43116 358 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
PTCD2-201ENST00000308077 NBPF15Q8N660 670 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 SLC17A8Q8NDX2 589 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 DNAAF4Q8WXU2 420 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 ARFGEF2Q9Y6D5 1785 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 A0A0G2JS52 829 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 MYT1Q01538 1121 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 AIMP1Q12904 312 aaKnown RBP8.78□□□□□ -1
PTCD2-201ENST00000308077 XAGE3Q8WTP9 111 aa8.78□□□□□ -1
PTCD2-201ENST00000308077 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
PTCD2-201ENST00000308077 CHMP4BQ9H444 224 aaKnown RBP8.78□□□□□ -1
PTCD2-201ENST00000308077 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 SBF2Q86WG5 1849 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 ERBB4Q15303 1308 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 CICQ96RK0 1608 aaPredicted RBP8.77□□□□□ -1.01
PTCD2-201ENST00000308077 ONECUT3O60422 494 aaPredicted RBP8.77□□□□□ -1.01
PTCD2-201ENST00000308077 A1BGP04217 495 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 HDAC1Q13547 482 aaPredicted RBP8.77□□□□□ -1.01
PTCD2-201ENST00000308077 BEND3Q5T5X7 828 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 KSR2Q6VAB6 950 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 DNAJC10Q8IXB1 793 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 SIRT2Q8IXJ6 389 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 VSIG10Q8N0Z9 540 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 MAP3K2Q9Y2U5 619 aa8.77□□□□□ -1.01
PTCD2-201ENST00000308077 BTAF1O14981 1849 aa8.76□□□□□ -1.01
PTCD2-201ENST00000308077 GRIN3BO60391 1043 aa8.76□□□□□ -1.01
PTCD2-201ENST00000308077 COPS6Q7L5N1 327 aa8.76□□□□□ -1.01
PTCD2-201ENST00000308077 SEPT12Q8IYM1 358 aa8.76□□□□□ -1.01
PTCD2-201ENST00000308077 PELP1Q8IZL8 1130 aaKnown RBP8.76□□□□□ -1.01
PTCD2-201ENST00000308077 RWDD1Q9H446 243 aaPredicted RBP8.76□□□□□ -1.01
PTCD2-201ENST00000308077 FAM182BQ5T319 152 aa8.76□□□□□ -1.01
PTCD2-201ENST00000308077 PIAS4Q8N2W9 510 aaPredicted RBP8.76□□□□□ -1.01
PTCD2-201ENST00000308077 SRCIN1Q9C0H9 1055 aa8.76□□□□□ -1.01
PTCD2-201ENST00000308077 CCDC85CA6NKD9 419 aa8.75□□□□□ -1.01
PTCD2-201ENST00000308077 MNX1P50219 401 aaPredicted RBP8.75□□□□□ -1.01
PTCD2-201ENST00000308077 PTF1AQ7RTS3 328 aa8.75□□□□□ -1.01
PTCD2-201ENST00000308077 USP44Q9H0E7 712 aa8.75□□□□□ -1.01
PTCD2-201ENST00000308077 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
PTCD2-201ENST00000308077 DDX58O95786 925 aaKnown RBP8.75□□□□□ -1.01
PTCD2-201ENST00000308077 CEP85Q6P2H3 762 aa8.75□□□□□ -1.01
PTCD2-201ENST00000308077 TEX13AQ9BXU3 409 aaPredicted RBP8.75□□□□□ -1.01
PTCD2-201ENST00000308077 PALLDQ8WX93 1383 aa8.75□□□□□ -1.01
PTCD2-201ENST00000308077 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
PTCD2-201ENST00000308077 COL5A3P25940 1745 aaPredicted RBP8.74□□□□□ -1.01
PTCD2-201ENST00000308077 CYP19A1P11511 503 aaPredicted RBP8.74□□□□□ -1.01
PTCD2-201ENST00000308077 CWF19L2Q2TBE0 894 aaKnown RBP8.74□□□□□ -1.01
PTCD2-201ENST00000308077 TTLL7Q6ZT98 887 aa8.74□□□□□ -1.01
PTCD2-201ENST00000308077 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
PTCD2-201ENST00000308077 ANKRD44Q8N8A2 993 aa8.74□□□□□ -1.01
PTCD2-201ENST00000308077 IGKV5-2P06315 115 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 GNAI3P08754 354 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 ANKRD13DQ6ZTN6 518 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 SMC5Q8IY18 1101 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 METTL22Q9BUU2 404 aaPredicted RBP8.73□□□□□ -1.01
PTCD2-201ENST00000308077 PDZRN3Q9UPQ7 1066 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 MYH14Q7Z406 1995 aaKnown RBP8.73□□□□□ -1.01
PTCD2-201ENST00000308077 LOC102724428A0A0B4J2F2 783 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 ALDH1L1O75891 902 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 GNAI2P04899 355 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 NBPF7P0C2Y1 421 aaPredicted RBP8.73□□□□□ -1.01
PTCD2-201ENST00000308077 SIK1P57059 783 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 LINS1Q8NG48 757 aa8.73□□□□□ -1.01
PTCD2-201ENST00000308077 RBM46Q8TBY0 533 aaKnown RBP8.73□□□□□ -1.01
PTCD2-201ENST00000308077 LRRFIP2Q9Y608 721 aaKnown RBP8.73□□□□□ -1.01
PTCD2-201ENST00000308077 STARD3NLO95772 234 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 ITPK1Q13572 414 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 RPAP2Q8IXW5 612 aaPredicted RBP8.72□□□□□ -1.01
PTCD2-201ENST00000308077 PLBD2Q8NHP8 589 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 MYD88Q99836 296 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 ZBTB1Q9Y2K1 713 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 LY75O60449 1722 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 NEURL1BA8MQ27 555 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
PTCD2-201ENST00000308077 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 FSTL1Q12841 308 aa8.72□□□□□ -1.01
PTCD2-201ENST00000308077 HABP4Q5JVS0 413 aaKnown RBP8.72□□□□□ -1.01
PTCD2-201ENST00000308077 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
PTCD2-201ENST00000308077 IBTKQ9P2D0 1353 aaPredicted RBP8.71□□□□□ -1.01
PTCD2-201ENST00000308077 CTCFP49711 727 aaPredicted RBP8.71□□□□□ -1.01
PTCD2-201ENST00000308077 RGS3P49796 1198 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms