RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
CLP1-201ENST00000302731 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
CLP1-201ENST00000302731 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.32
CLP1-201ENST00000302731 DDB1Q16531 1140 aa13.08□□□□□ -0.32
CLP1-201ENST00000302731 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
CLP1-201ENST00000302731 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.32
CLP1-201ENST00000302731 MYD88Q99836 296 aa13.08□□□□□ -0.32
CLP1-201ENST00000302731 APBB1O00213 710 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 STARD3NLO95772 234 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 ERC1Q8IUD2 1116 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 RHPN1Q8TCX5 695 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 SUCLG2Q96I99 432 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 ASAP1Q9ULH1 1129 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 NUP188Q5SRE5 1749 aa13.07□□□□□ -0.32
CLP1-201ENST00000302731 NUTM2BA6NNL0 878 aaPredicted RBP13.06□□□□□ -0.32
CLP1-201ENST00000302731 NUTM2EB1AL46 878 aaPredicted RBP13.06□□□□□ -0.32
CLP1-201ENST00000302731 MX1P20591 662 aa13.06□□□□□ -0.32
CLP1-201ENST00000302731 RBM25P49756 843 aaKnown RBP13.06□□□□□ -0.32
CLP1-201ENST00000302731 MFAP1P55081 439 aaKnown RBP13.06□□□□□ -0.32
CLP1-201ENST00000302731 UNC5CLQ8IV45 518 aa13.06□□□□□ -0.32
CLP1-201ENST00000302731 NUTM2AQ8IVF1 878 aaPredicted RBP13.06□□□□□ -0.32
CLP1-201ENST00000302731 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
CLP1-201ENST00000302731 A1BGP04217 495 aa13.06□□□□□ -0.32
CLP1-201ENST00000302731 SDSP20132 328 aa13.05□□□□□ -0.32
CLP1-201ENST00000302731 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
CLP1-201ENST00000302731 BECN1Q14457 450 aa13.05□□□□□ -0.32
CLP1-201ENST00000302731 CASC1Q6TDU7 716 aa13.05□□□□□ -0.32
CLP1-201ENST00000302731 BICC1Q9H694 974 aaKnown RBP13.05□□□□□ -0.32
CLP1-201ENST00000302731 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
CLP1-201ENST00000302731 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
CLP1-201ENST00000302731 DOT1LQ8TEK3 1739 aa13.04□□□□□ -0.32
CLP1-201ENST00000302731 VPS72Q15906 364 aa13.04□□□□□ -0.32
CLP1-201ENST00000302731 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
CLP1-201ENST00000302731 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
CLP1-201ENST00000302731 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
CLP1-201ENST00000302731 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
CLP1-201ENST00000302731 CASP7P55210 303 aa13.03□□□□□ -0.32
CLP1-201ENST00000302731 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
CLP1-201ENST00000302731 DNAJC10Q8IXB1 793 aa13.03□□□□□ -0.32
CLP1-201ENST00000302731 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
CLP1-201ENST00000302731 BCL9LQ86UU0 1499 aa13.03□□□□□ -0.32
CLP1-201ENST00000302731 CICQ96RK0 1608 aaPredicted RBP13.03□□□□□ -0.32
CLP1-201ENST00000302731 A0A087WZG4 1122 aa13.02□□□□□ -0.32
CLP1-201ENST00000302731 H7C1W4 665 aa13.02□□□□□ -0.32
CLP1-201ENST00000302731 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.32
CLP1-201ENST00000302731 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.32
CLP1-201ENST00000302731 ANP32EQ9BTT0 268 aa13.02□□□□□ -0.32
CLP1-201ENST00000302731 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.32
CLP1-201ENST00000302731 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
CLP1-201ENST00000302731 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
CLP1-201ENST00000302731 OS9Q13438 667 aaPredicted RBP13.02□□□□□ -0.33
CLP1-201ENST00000302731 CLASRPQ8N2M8 674 aaKnown RBP13.02□□□□□ -0.33
CLP1-201ENST00000302731 MARCH10Q8NA82 808 aaPredicted RBP13.02□□□□□ -0.33
CLP1-201ENST00000302731 CERKQ8TCT0 537 aa13.02□□□□□ -0.33
CLP1-201ENST00000302731 COPRSQ9NQ92 184 aa13.02□□□□□ -0.33
CLP1-201ENST00000302731 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.33
CLP1-201ENST00000302731 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
CLP1-201ENST00000302731 G3BP1Q13283 466 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLP1-201ENST00000302731 KIF6Q6ZMV9 814 aa13.01□□□□□ -0.33
CLP1-201ENST00000302731 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
CLP1-201ENST00000302731 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
CLP1-201ENST00000302731 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
CLP1-201ENST00000302731 IL1RAPL2Q9NP60 686 aa13.01□□□□□ -0.33
CLP1-201ENST00000302731 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
CLP1-201ENST00000302731 TJP1Q07157 1748 aa13□□□□□ -0.33
CLP1-201ENST00000302731 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
CLP1-201ENST00000302731 TCIRG1Q13488 830 aa13□□□□□ -0.33
CLP1-201ENST00000302731 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
CLP1-201ENST00000302731 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
CLP1-201ENST00000302731 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 REC8O95072 547 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 C8orf37Q96NL8 207 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 IL6STP40189 918 aaPredicted RBP12.99□□□□□ -0.33
CLP1-201ENST00000302731 RFX5P48382 616 aaPredicted RBP12.99□□□□□ -0.33
CLP1-201ENST00000302731 PI4K2BQ8TCG2 481 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
CLP1-201ENST00000302731 GPATCH3Q96I76 525 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
CLP1-201ENST00000302731 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
CLP1-201ENST00000302731 ZNF831Q5JPB2 1677 aa12.98□□□□□ -0.33
CLP1-201ENST00000302731 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
CLP1-201ENST00000302731 ERC2O15083 957 aa12.98□□□□□ -0.33
CLP1-201ENST00000302731 EPB41L2O43491 1005 aaKnown RBP12.98□□□□□ -0.33
CLP1-201ENST00000302731 GLRX3O76003 335 aaKnown RBP12.98□□□□□ -0.33
CLP1-201ENST00000302731 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
CLP1-201ENST00000302731 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
CLP1-201ENST00000302731 SASH1O94885 1247 aa12.97□□□□□ -0.33
CLP1-201ENST00000302731 FOXO4P98177 505 aa12.97□□□□□ -0.33
CLP1-201ENST00000302731 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
CLP1-201ENST00000302731 SNX21Q969T3 373 aa12.97□□□□□ -0.33
CLP1-201ENST00000302731 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
CLP1-201ENST00000302731 ECHDC1Q9NTX5 307 aa12.97□□□□□ -0.33
CLP1-201ENST00000302731 RREB1Q92766 1687 aa12.97□□□□□ -0.33
CLP1-201ENST00000302731 IFIT2P09913 472 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms