RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 COL9A3Q14050 684 aaPredicted RBP12.99□□□□□ -0.33
SNX20-201ENST00000300590 DDX11Q96FC9 970 aa12.99□□□□□ -0.33
SNX20-201ENST00000300590 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
SNX20-201ENST00000300590 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
SNX20-201ENST00000300590 GLI2P10070 1586 aa12.99□□□□□ -0.33
SNX20-201ENST00000300590 LSG1Q9H089 658 aaKnown RBP12.99□□□□□ -0.33
SNX20-201ENST00000300590 CYP46A1Q9Y6A2 500 aa12.99□□□□□ -0.33
SNX20-201ENST00000300590 BECN2A8MW95 431 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 GNAI3P08754 354 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 LRRC8AQ8IWT6 810 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 CALCOCO1Q9P1Z2 691 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 FANCAO15360 1455 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 CAPN2P17655 700 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 SYCP1Q15431 976 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
SNX20-201ENST00000300590 HNRNPH2P55795 449 aaKnown RBP12.98□□□□□ -0.33
SNX20-201ENST00000300590 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
SNX20-201ENST00000300590 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 PPFIA3O75145 1194 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
SNX20-201ENST00000300590 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 IRX3P78415 501 aaPredicted RBP12.97□□□□□ -0.33
SNX20-201ENST00000300590 FLIIQ13045 1269 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 LRRN4CLQ8ND94 238 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 CAMSAP1Q5T5Y3 1602 aa12.97□□□□□ -0.33
SNX20-201ENST00000300590 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
SNX20-201ENST00000300590 EFCAB6Q5THR3 1501 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 PPP1R42Q7Z4L9 355 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 TPCN1Q9ULQ1 816 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 RAB11FIP3O75154 756 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.33
SNX20-201ENST00000300590 ST3GAL1Q11201 340 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 LARP1Q6PKG0 1096 aaKnown RBP12.96□□□□□ -0.33
SNX20-201ENST00000300590 NEK11Q8NG66 645 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 ZNF446Q9NWS9 450 aa12.96□□□□□ -0.33
SNX20-201ENST00000300590 SRGAP3O43295 1099 aa12.96□□□□□ -0.34
SNX20-201ENST00000300590 KIAA0232Q92628 1395 aa12.96□□□□□ -0.34
SNX20-201ENST00000300590 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
SNX20-201ENST00000300590 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
SNX20-201ENST00000300590 RHPN1Q8TCX5 695 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
SNX20-201ENST00000300590 ZC3H13Q5T200 1668 aaKnown RBP12.95□□□□□ -0.34
SNX20-201ENST00000300590 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 SYT10Q6XYQ8 523 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 ABCC3O15438 1527 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 YEATS2Q9ULM3 1422 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
SNX20-201ENST00000300590 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
SNX20-201ENST00000300590 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
SNX20-201ENST00000300590 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
SNX20-201ENST00000300590 TDRD7Q8NHU6 1098 aaKnown RBP12.94□□□□□ -0.34
SNX20-201ENST00000300590 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
SNX20-201ENST00000300590 PI4K2BQ8TCG2 481 aa12.94□□□□□ -0.34
SNX20-201ENST00000300590 CLSTN2Q9H4D0 955 aa12.94□□□□□ -0.34
SNX20-201ENST00000300590 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
SNX20-201ENST00000300590 DEPDC5O75140 1603 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
SNX20-201ENST00000300590 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 HOMER1Q86YM7 354 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
SNX20-201ENST00000300590 SCAND2PQ9GZW5 306 aaPredicted RBP12.93□□□□□ -0.34
SNX20-201ENST00000300590 USP44Q9H0E7 712 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 TMX1Q9H3N1 280 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
SNX20-201ENST00000300590 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 IFT172Q9UG01 1749 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
SNX20-201ENST00000300590 FAM177A1Q8N128 213 aaPredicted RBP12.93□□□□□ -0.34
SNX20-201ENST00000300590 SH2B1Q9NRF2 756 aaPredicted RBP12.93□□□□□ -0.34
SNX20-201ENST00000300590 EIF2S2P20042 333 aaKnown RBP12.92□□□□□ -0.34
SNX20-201ENST00000300590 SNW1Q13573 536 aaKnown RBP12.92□□□□□ -0.34
SNX20-201ENST00000300590 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.92□□□□□ -0.34
SNX20-201ENST00000300590 CCAR2Q8N163 923 aaKnown RBP12.92□□□□□ -0.34
SNX20-201ENST00000300590 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
SNX20-201ENST00000300590 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
SNX20-201ENST00000300590 CLCN6P51797 869 aa12.92□□□□□ -0.34
SNX20-201ENST00000300590 FTOQ9C0B1 505 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNX20-201ENST00000300590 EPC1Q9H2F5 836 aa12.92□□□□□ -0.34
SNX20-201ENST00000300590 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
SNX20-201ENST00000300590 H3BQV1 296 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 JAK2O60674 1132 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 IFFO2Q5TF58 517 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
SNX20-201ENST00000300590 SEC31AO94979 1220 aaKnown RBP12.91□□□□□ -0.34
SNX20-201ENST00000300590 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 PHAXQ9H814 394 aaKnown RBP12.91□□□□□ -0.34
SNX20-201ENST00000300590 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
SNX20-201ENST00000300590 MROH1Q8NDA8 1641 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 MAP2P11137 1827 aaKnown RBP12.91□□□□□ -0.34
SNX20-201ENST00000300590 FAM227BQ96M60 508 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
SNX20-201ENST00000300590 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms