RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
CCDC178-201ENST00000300227 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
CCDC178-201ENST00000300227 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
CCDC178-201ENST00000300227 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
CCDC178-201ENST00000300227 TRPC5Q9UL62 973 aaPredicted RBP17.22■□□□□ 0.35
CCDC178-201ENST00000300227 GCKRQ14397 625 aa17.22■□□□□ 0.35
CCDC178-201ENST00000300227 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
CCDC178-201ENST00000300227 PTF1AQ7RTS3 328 aa17.22■□□□□ 0.35
CCDC178-201ENST00000300227 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
CCDC178-201ENST00000300227 C16orf71Q8IYS4 520 aaPredicted RBP17.22■□□□□ 0.35
CCDC178-201ENST00000300227 QTRT2Q9H974 415 aaKnown RBP17.22■□□□□ 0.35
CCDC178-201ENST00000300227 CYP19A1P11511 503 aaPredicted RBP17.22■□□□□ 0.35
CCDC178-201ENST00000300227 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
CCDC178-201ENST00000300227 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
CCDC178-201ENST00000300227 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
CCDC178-201ENST00000300227 WNK3Q9BYP7 1800 aa17.22■□□□□ 0.35
CCDC178-201ENST00000300227 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
CCDC178-201ENST00000300227 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
CCDC178-201ENST00000300227 ITGB4P16144 1822 aa17.2■□□□□ 0.34
CCDC178-201ENST00000300227 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
CCDC178-201ENST00000300227 SIK1P57059 783 aa17.2■□□□□ 0.34
CCDC178-201ENST00000300227 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
CCDC178-201ENST00000300227 DOT1LQ8TEK3 1739 aa17.2■□□□□ 0.34
CCDC178-201ENST00000300227 A0A087WZG4 1122 aa17.19■□□□□ 0.34
CCDC178-201ENST00000300227 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
CCDC178-201ENST00000300227 KCNQ4P56696 695 aa17.19■□□□□ 0.34
CCDC178-201ENST00000300227 UBE3BQ7Z3V4 1068 aa17.19■□□□□ 0.34
CCDC178-201ENST00000300227 SEPT12Q8IYM1 358 aa17.19■□□□□ 0.34
CCDC178-201ENST00000300227 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
CCDC178-201ENST00000300227 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
CCDC178-201ENST00000300227 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
CCDC178-201ENST00000300227 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
CCDC178-201ENST00000300227 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
CCDC178-201ENST00000300227 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
CCDC178-201ENST00000300227 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
CCDC178-201ENST00000300227 ITPK1Q13572 414 aa17.17■□□□□ 0.34
CCDC178-201ENST00000300227 TBC1D2BQ9UPU7 963 aa17.17■□□□□ 0.34
CCDC178-201ENST00000300227 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
CCDC178-201ENST00000300227 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
CCDC178-201ENST00000300227 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
CCDC178-201ENST00000300227 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
CCDC178-201ENST00000300227 POLA2Q14181 598 aa17.15■□□□□ 0.34
CCDC178-201ENST00000300227 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
CCDC178-201ENST00000300227 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
CCDC178-201ENST00000300227 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
CCDC178-201ENST00000300227 CRKLP46109 303 aaKnown RBP17.15■□□□□ 0.34
CCDC178-201ENST00000300227 CWC25Q9NXE8 425 aaPredicted RBP17.15■□□□□ 0.34
CCDC178-201ENST00000300227 UTYO14607 1347 aa17.15■□□□□ 0.34
CCDC178-201ENST00000300227 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
CCDC178-201ENST00000300227 GPTP24298 496 aa17.14■□□□□ 0.33
CCDC178-201ENST00000300227 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
CCDC178-201ENST00000300227 ATRNO75882 1429 aa17.14■□□□□ 0.33
CCDC178-201ENST00000300227 HLFQ16534 295 aa17.14■□□□□ 0.33
CCDC178-201ENST00000300227 IBTKQ9P2D0 1353 aaPredicted RBP17.13■□□□□ 0.33
CCDC178-201ENST00000300227 SEC24BO95487 1268 aa17.13■□□□□ 0.33
CCDC178-201ENST00000300227 TCIRG1Q13488 830 aa17.13■□□□□ 0.33
CCDC178-201ENST00000300227 INTS5Q6P9B9 1019 aaKnown RBP17.13■□□□□ 0.33
CCDC178-201ENST00000300227 DZIP3Q86Y13 1208 aaKnown RBP17.13■□□□□ 0.33
CCDC178-201ENST00000300227 MAP3K15Q6ZN16 1313 aa17.12■□□□□ 0.33
CCDC178-201ENST00000300227 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
CCDC178-201ENST00000300227 IL6STP40189 918 aaPredicted RBP17.12■□□□□ 0.33
CCDC178-201ENST00000300227 MTX1Q13505 466 aa17.12■□□□□ 0.33
CCDC178-201ENST00000300227 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
CCDC178-201ENST00000300227 CHMP3Q9Y3E7 222 aa17.12■□□□□ 0.33
CCDC178-201ENST00000300227 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
CCDC178-201ENST00000300227 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
CCDC178-201ENST00000300227 SIL1Q9H173 461 aa17.12■□□□□ 0.33
CCDC178-201ENST00000300227 ONECUT3O60422 494 aaPredicted RBP17.11■□□□□ 0.33
CCDC178-201ENST00000300227 GIGYF2Q6Y7W6 1299 aaKnown RBP17.1■□□□□ 0.33
CCDC178-201ENST00000300227 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
CCDC178-201ENST00000300227 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
CCDC178-201ENST00000300227 H7C1W4 665 aa17.1■□□□□ 0.33
CCDC178-201ENST00000300227 ANP32AP39687 249 aaKnown RBP17.1■□□□□ 0.33
CCDC178-201ENST00000300227 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
CCDC178-201ENST00000300227 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
CCDC178-201ENST00000300227 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.09■□□□□ 0.33
CCDC178-201ENST00000300227 CASP7P55210 303 aa17.09■□□□□ 0.33
CCDC178-201ENST00000300227 LMBR1LQ6UX01 489 aa17.09■□□□□ 0.33
CCDC178-201ENST00000300227 SMIM5Q71RC9 77 aa17.09■□□□□ 0.33
CCDC178-201ENST00000300227 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
CCDC178-201ENST00000300227 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
CCDC178-201ENST00000300227 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
CCDC178-201ENST00000300227 RAB11FIP3O75154 756 aa17.09■□□□□ 0.33
CCDC178-201ENST00000300227 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
CCDC178-201ENST00000300227 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.33
CCDC178-201ENST00000300227 KIF1BPQ96EK5 621 aa17.08■□□□□ 0.33
CCDC178-201ENST00000300227 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.32
CCDC178-201ENST00000300227 THSD7AQ9UPZ6 1657 aa17.07■□□□□ 0.32
CCDC178-201ENST00000300227 PDE1AP54750 535 aa17.07■□□□□ 0.32
CCDC178-201ENST00000300227 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
CCDC178-201ENST00000300227 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC178-201ENST00000300227 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
CCDC178-201ENST00000300227 SYNE4Q8N205 404 aa17.07■□□□□ 0.32
CCDC178-201ENST00000300227 CCDC85AQ96PX6 553 aaPredicted RBP17.07■□□□□ 0.32
CCDC178-201ENST00000300227 CCNL1Q9UK58 526 aaPredicted RBP17.07■□□□□ 0.32
CCDC178-201ENST00000300227 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
CCDC178-201ENST00000300227 MX1P20591 662 aa17.06■□□□□ 0.32
CCDC178-201ENST00000300227 KRT27Q7Z3Y8 459 aa17.06■□□□□ 0.32
CCDC178-201ENST00000300227 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
CCDC178-201ENST00000300227 EP400Q96L91 3159 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms