RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 APBB1O00213 710 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
COPS2-201ENST00000299259 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
COPS2-201ENST00000299259 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
COPS2-201ENST00000299259 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 SSH3Q8TE77 659 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 USP21Q9UK80 565 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 EXOC6BQ9Y2D4 811 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
COPS2-201ENST00000299259 NHSQ6T4R5 1651 aa13.04□□□□□ -0.32
COPS2-201ENST00000299259 POLA2Q14181 598 aa13.04□□□□□ -0.32
COPS2-201ENST00000299259 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
COPS2-201ENST00000299259 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
COPS2-201ENST00000299259 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
COPS2-201ENST00000299259 STARD3NLO95772 234 aa13.03□□□□□ -0.32
COPS2-201ENST00000299259 MTX1Q13505 466 aa13.03□□□□□ -0.32
COPS2-201ENST00000299259 GCKRQ14397 625 aa13.03□□□□□ -0.32
COPS2-201ENST00000299259 AK9Q5TCS8 1911 aa13.03□□□□□ -0.32
COPS2-201ENST00000299259 A0A0G2JS52 829 aa13.03□□□□□ -0.32
COPS2-201ENST00000299259 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
COPS2-201ENST00000299259 BTAF1O14981 1849 aa13.02□□□□□ -0.32
COPS2-201ENST00000299259 NUP98P52948 1817 aa13.02□□□□□ -0.32
COPS2-201ENST00000299259 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
COPS2-201ENST00000299259 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
COPS2-201ENST00000299259 LRRCC1Q9C099 1032 aa13.02□□□□□ -0.33
COPS2-201ENST00000299259 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
COPS2-201ENST00000299259 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
COPS2-201ENST00000299259 SUCLG2Q96I99 432 aa13.01□□□□□ -0.33
COPS2-201ENST00000299259 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
COPS2-201ENST00000299259 MYT1Q01538 1121 aa13.01□□□□□ -0.33
COPS2-201ENST00000299259 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
COPS2-201ENST00000299259 COL15A1P39059 1388 aa13□□□□□ -0.33
COPS2-201ENST00000299259 OTUD7AQ8TE49 926 aaPredicted RBP13□□□□□ -0.33
COPS2-201ENST00000299259 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
COPS2-201ENST00000299259 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
COPS2-201ENST00000299259 PALLDQ8WX93 1383 aa13□□□□□ -0.33
COPS2-201ENST00000299259 AFF2P51816 1311 aa13□□□□□ -0.33
COPS2-201ENST00000299259 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
COPS2-201ENST00000299259 SURF6O75683 361 aaKnown RBP13□□□□□ -0.33
COPS2-201ENST00000299259 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
COPS2-201ENST00000299259 TTC22Q5TAA0 569 aa13□□□□□ -0.33
COPS2-201ENST00000299259 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
COPS2-201ENST00000299259 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
COPS2-201ENST00000299259 BICC1Q9H694 974 aaKnown RBP13□□□□□ -0.33
COPS2-201ENST00000299259 MYH14Q7Z406 1995 aaKnown RBP12.99□□□□□ -0.33
COPS2-201ENST00000299259 ATRNO75882 1429 aa12.99□□□□□ -0.33
COPS2-201ENST00000299259 MYH3P11055 1940 aa12.99□□□□□ -0.33
COPS2-201ENST00000299259 RAB11FIP3O75154 756 aa12.99□□□□□ -0.33
COPS2-201ENST00000299259 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
COPS2-201ENST00000299259 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
COPS2-201ENST00000299259 UPF2Q9HAU5 1272 aaKnown RBP12.99□□□□□ -0.33
COPS2-201ENST00000299259 SEC24BO95487 1268 aa12.98□□□□□ -0.33
COPS2-201ENST00000299259 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
COPS2-201ENST00000299259 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
COPS2-201ENST00000299259 BCORQ6W2J9 1755 aa12.98□□□□□ -0.33
COPS2-201ENST00000299259 KIF1BPQ96EK5 621 aa12.98□□□□□ -0.33
COPS2-201ENST00000299259 CWC25Q9NXE8 425 aaPredicted RBP12.98□□□□□ -0.33
COPS2-201ENST00000299259 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
COPS2-201ENST00000299259 SALL3Q9BXA9 1300 aa12.97□□□□□ -0.33
COPS2-201ENST00000299259 A0A087WZG4 1122 aa12.97□□□□□ -0.33
COPS2-201ENST00000299259 SMARCC1Q92922 1105 aaPredicted RBP12.97□□□□□ -0.33
COPS2-201ENST00000299259 IPO9Q96P70 1041 aaKnown RBP12.97□□□□□ -0.33
COPS2-201ENST00000299259 LY75O60449 1722 aa12.97□□□□□ -0.33
COPS2-201ENST00000299259 LOC102724428A0A0B4J2F2 783 aa12.96□□□□□ -0.33
COPS2-201ENST00000299259 MX1P20591 662 aa12.96□□□□□ -0.33
COPS2-201ENST00000299259 SIK1P57059 783 aa12.96□□□□□ -0.33
COPS2-201ENST00000299259 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
COPS2-201ENST00000299259 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.33
COPS2-201ENST00000299259 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.33
COPS2-201ENST00000299259 NOP58Q9Y2X3 529 aaKnown RBP12.96□□□□□ -0.33
COPS2-201ENST00000299259 MAP3K15Q6ZN16 1313 aa12.96□□□□□ -0.33
COPS2-201ENST00000299259 PDE1AP54750 535 aa12.96□□□□□ -0.34
COPS2-201ENST00000299259 CASP7P55210 303 aa12.96□□□□□ -0.34
COPS2-201ENST00000299259 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.34
COPS2-201ENST00000299259 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.34
COPS2-201ENST00000299259 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.34
COPS2-201ENST00000299259 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 KCNQ2O43526 872 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 CDC45O75419 566 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 IL6STP40189 918 aaPredicted RBP12.95□□□□□ -0.34
COPS2-201ENST00000299259 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 DDRGK1Q96HY6 314 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
COPS2-201ENST00000299259 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 AOX1Q06278 1338 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
COPS2-201ENST00000299259 TCIRG1Q13488 830 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 RABL6Q3YEC7 729 aaPredicted RBP12.95□□□□□ -0.34
COPS2-201ENST00000299259 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 JARID2Q92833 1246 aaPredicted RBP12.95□□□□□ -0.34
COPS2-201ENST00000299259 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
COPS2-201ENST00000299259 H7C1W4 665 aa12.94□□□□□ -0.34
COPS2-201ENST00000299259 TBC1D32Q96NH3 1257 aa12.94□□□□□ -0.34
COPS2-201ENST00000299259 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
COPS2-201ENST00000299259 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
COPS2-201ENST00000299259 SCN7AQ01118 1682 aa12.94□□□□□ -0.34
COPS2-201ENST00000299259 LAMB2P55268 1798 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms