RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 MYD88Q99836 296 aa15.09■□□□□ 0.01
SDE2-201ENST00000272091 APBB1O00213 710 aa15.09■□□□□ 0.01
SDE2-201ENST00000272091 NGLY1Q96IV0 654 aa15.09■□□□□ 0.01
SDE2-201ENST00000272091 CCDC9Q9Y3X0 531 aaKnown RBP15.09■□□□□ 0.01
SDE2-201ENST00000272091 RREB1Q92766 1687 aa15.09■□□□□ 0.01
SDE2-201ENST00000272091 MTX1Q13505 466 aa15.09■□□□□ 0.01
SDE2-201ENST00000272091 PLBD2Q8NHP8 589 aa15.09■□□□□ 0.01
SDE2-201ENST00000272091 SUCLG2Q96I99 432 aa15.09■□□□□ 0.01
SDE2-201ENST00000272091 GRM8O00222 908 aa15.08■□□□□ 0
SDE2-201ENST00000272091 GSPT1P15170 499 aaKnown RBP15.08■□□□□ 0
SDE2-201ENST00000272091 SALL3Q9BXA9 1300 aa15.08■□□□□ 0
SDE2-201ENST00000272091 GCKRQ14397 625 aa15.08■□□□□ 0
SDE2-201ENST00000272091 FAM98CQ17RN3 349 aaKnown RBP15.08■□□□□ 0
SDE2-201ENST00000272091 BMP2KLQ5H9B9 411 aa15.08■□□□□ 0
SDE2-201ENST00000272091 ANP32EQ9BTT0 268 aa15.08■□□□□ 0
SDE2-201ENST00000272091 KAT6BQ8WYB5 2073 aa15.08■□□□□ 0
SDE2-201ENST00000272091 C9orf78Q9NZ63 289 aaPredicted RBP15.07■□□□□ 0
SDE2-201ENST00000272091 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
SDE2-201ENST00000272091 SYTL4Q96C24 671 aaPredicted RBP15.06■□□□□ 0
SDE2-201ENST00000272091 ACSBG1Q96GR2 724 aa15.06■□□□□ 0
SDE2-201ENST00000272091 SRGAP3O43295 1099 aa15.06■□□□□ 0
SDE2-201ENST00000272091 MYT1Q01538 1121 aa15.06■□□□□ 0
SDE2-201ENST00000272091 COL5A3P25940 1745 aaPredicted RBP15.05■□□□□ 0
SDE2-201ENST00000272091 CASP7P55210 303 aa15.05■□□□□ 0
SDE2-201ENST00000272091 ATP5J2-PTCD1G3V325 749 aa15.05■□□□□ -0
SDE2-201ENST00000272091 CYP19A1P11511 503 aaPredicted RBP15.05■□□□□ -0
SDE2-201ENST00000272091 ANP32AP39687 249 aaKnown RBP15.05■□□□□ -0
SDE2-201ENST00000272091 EPHA10Q5JZY3 1008 aa15.05■□□□□ -0
SDE2-201ENST00000272091 BICC1Q9H694 974 aaKnown RBP15.05■□□□□ -0
SDE2-201ENST00000272091 ANKRD36CQ5JPF3 1778 aa15.05■□□□□ -0
SDE2-201ENST00000272091 NEXNQ0ZGT2 675 aa15.04■□□□□ -0
SDE2-201ENST00000272091 TTC22Q5TAA0 569 aa15.04■□□□□ -0
SDE2-201ENST00000272091 USP21Q9UK80 565 aa15.04■□□□□ -0
SDE2-201ENST00000272091 JARID2Q92833 1246 aaPredicted RBP15.04■□□□□ -0
SDE2-201ENST00000272091 LRRCC1Q9C099 1032 aa15.04■□□□□ -0
SDE2-201ENST00000272091 ZNF831Q5JPB2 1677 aa15.04■□□□□ -0
SDE2-201ENST00000272091 TEX13AQ9BXU3 409 aaPredicted RBP15.04■□□□□ -0
SDE2-201ENST00000272091 IPO9Q96P70 1041 aaKnown RBP15.03■□□□□ -0
SDE2-201ENST00000272091 BCL11AQ9H165 835 aa15.03■□□□□ -0
SDE2-201ENST00000272091 COL15A1P39059 1388 aa15.03■□□□□ -0
SDE2-201ENST00000272091 ZBTB3Q9H5J0 574 aa15.03■□□□□ -0
SDE2-201ENST00000272091 KCNQ2O43526 872 aa15.03■□□□□ -0
SDE2-201ENST00000272091 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
SDE2-201ENST00000272091 MYH14Q7Z406 1995 aaKnown RBP15.02■□□□□ -0
SDE2-201ENST00000272091 OSBPL3Q9H4L5 887 aa15.02■□□□□ -0
SDE2-201ENST00000272091 NHSQ6T4R5 1651 aa15.02■□□□□ -0
SDE2-201ENST00000272091 NUP98P52948 1817 aa15.02□□□□□ -0.01
SDE2-201ENST00000272091 SURF6O75683 361 aaKnown RBP15.01□□□□□ -0.01
SDE2-201ENST00000272091 PA2G4Q9UQ80 394 aaKnown RBP15.01□□□□□ -0.01
SDE2-201ENST00000272091 BTAF1O14981 1849 aa15.01□□□□□ -0.01
SDE2-201ENST00000272091 PDE1AP54750 535 aa15.01□□□□□ -0.01
SDE2-201ENST00000272091 ATRNO75882 1429 aa15.01□□□□□ -0.01
SDE2-201ENST00000272091 ZBTB1Q9Y2K1 713 aa15.01□□□□□ -0.01
SDE2-201ENST00000272091 SBF2Q86WG5 1849 aa15.01□□□□□ -0.01
SDE2-201ENST00000272091 STARD3NLO95772 234 aa15□□□□□ -0.01
SDE2-201ENST00000272091 TSHZ3Q63HK5 1081 aa15□□□□□ -0.01
SDE2-201ENST00000272091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15□□□□□ -0.01
SDE2-201ENST00000272091 RAB11FIP3O75154 756 aa15□□□□□ -0.01
SDE2-201ENST00000272091 PTF1AQ7RTS3 328 aa15□□□□□ -0.01
SDE2-201ENST00000272091 RHPN1Q8TCX5 695 aa15□□□□□ -0.01
SDE2-201ENST00000272091 IL1RAPL2Q9NP60 686 aa15□□□□□ -0.01
SDE2-201ENST00000272091 H7C1W4 665 aa15□□□□□ -0.01
SDE2-201ENST00000272091 UBE3BQ7Z3V4 1068 aa15□□□□□ -0.01
SDE2-201ENST00000272091 ISCA1Q9BUE6 129 aa15□□□□□ -0.01
SDE2-201ENST00000272091 AFF2P51816 1311 aa14.99□□□□□ -0.01
SDE2-201ENST00000272091 A0A087WZG4 1122 aa14.99□□□□□ -0.01
SDE2-201ENST00000272091 ITPK1Q13572 414 aa14.99□□□□□ -0.01
SDE2-201ENST00000272091 TBC1D9Q6ZT07 1266 aa14.99□□□□□ -0.01
SDE2-201ENST00000272091 TBC1D32Q96NH3 1257 aa14.99□□□□□ -0.01
SDE2-201ENST00000272091 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
SDE2-201ENST00000272091 RABL6Q3YEC7 729 aaPredicted RBP14.99□□□□□ -0.01
SDE2-201ENST00000272091 RFX5P48382 616 aaPredicted RBP14.99□□□□□ -0.01
SDE2-201ENST00000272091 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
SDE2-201ENST00000272091 INTS5Q6P9B9 1019 aaKnown RBP14.98□□□□□ -0.01
SDE2-201ENST00000272091 STAP2Q9UGK3 403 aa14.98□□□□□ -0.01
SDE2-201ENST00000272091 SDSP20132 328 aa14.98□□□□□ -0.01
SDE2-201ENST00000272091 FOXO4P98177 505 aa14.98□□□□□ -0.01
SDE2-201ENST00000272091 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
SDE2-201ENST00000272091 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
SDE2-201ENST00000272091 MX1P20591 662 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 HLFQ16534 295 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 KLHDC4Q8TBB5 520 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 CWC25Q9NXE8 425 aaPredicted RBP14.97□□□□□ -0.01
SDE2-201ENST00000272091 ZNF330Q9Y3S2 320 aaPredicted RBP14.97□□□□□ -0.01
SDE2-201ENST00000272091 LOC102724428A0A0B4J2F2 783 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 MFAP1P55081 439 aaKnown RBP14.97□□□□□ -0.01
SDE2-201ENST00000272091 SIK1P57059 783 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 TCIRG1Q13488 830 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 KIF1BPQ96EK5 621 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 CCDC191Q8NCU4 936 aa14.97□□□□□ -0.01
SDE2-201ENST00000272091 GJD4Q96KN9 370 aaPredicted RBP14.97□□□□□ -0.01
SDE2-201ENST00000272091 BCORQ6W2J9 1755 aa14.96□□□□□ -0.01
SDE2-201ENST00000272091 A0A0G2JS52 829 aa14.96□□□□□ -0.01
SDE2-201ENST00000272091 SASH1O94885 1247 aa14.96□□□□□ -0.01
SDE2-201ENST00000272091 MEX3CQ5U5Q3 659 aaKnown RBP14.96□□□□□ -0.01
SDE2-201ENST00000272091 LY75O60449 1722 aa14.96□□□□□ -0.02
SDE2-201ENST00000272091 CDC45O75419 566 aa14.95□□□□□ -0.02
SDE2-201ENST00000272091 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
SDE2-201ENST00000272091 AK9Q5TCS8 1911 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms