RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PNMA6EA0A0J9YXQ4 647 aa29.03■■■□□ 2.24
SYNGR3-201ENST00000248121 ATP8B2P98198 1209 aa29.03■■■□□ 2.24
SYNGR3-201ENST00000248121 SMARCA5O60264 1052 aaPredicted RBP29.01■■■□□ 2.24
SYNGR3-201ENST00000248121 VSIG10Q8N0Z9 540 aa29.01■■■□□ 2.24
SYNGR3-201ENST00000248121 QTRT2Q9H974 415 aaKnown RBP29.01■■■□□ 2.24
SYNGR3-201ENST00000248121 UBTFL1P0CB47 393 aaPredicted RBP29.01■■■□□ 2.23
SYNGR3-201ENST00000248121 ERBB4Q15303 1308 aa29.01■■■□□ 2.23
SYNGR3-201ENST00000248121 NBPF7P0C2Y1 421 aaPredicted RBP29■■■□□ 2.23
SYNGR3-201ENST00000248121 TTLL7Q6ZT98 887 aa29■■■□□ 2.23
SYNGR3-201ENST00000248121 RIC3Q7Z5B4 369 aa29■■■□□ 2.23
SYNGR3-201ENST00000248121 OTUD7AQ8TE49 926 aaPredicted RBP29■■■□□ 2.23
SYNGR3-201ENST00000248121 TBC1D32Q96NH3 1257 aa29■■■□□ 2.23
SYNGR3-201ENST00000248121 BRWD3Q6RI45 1802 aa29■■■□□ 2.23
SYNGR3-201ENST00000248121 SBF2Q86WG5 1849 aa29■■■□□ 2.23
SYNGR3-201ENST00000248121 BTAF1O14981 1849 aa29■■■□□ 2.23
SYNGR3-201ENST00000248121 DDX58O95786 925 aaKnown RBP29■■■□□ 2.23
SYNGR3-201ENST00000248121 APBB1O00213 710 aa28.99■■■□□ 2.23
SYNGR3-201ENST00000248121 IGKV5-2P06315 115 aa28.99■■■□□ 2.23
SYNGR3-201ENST00000248121 NHSQ6T4R5 1651 aa28.99■■■□□ 2.23
SYNGR3-201ENST00000248121 EP400Q96L91 3159 aa28.98■■■□□ 2.23
SYNGR3-201ENST00000248121 ANKRD13DQ6ZTN6 518 aa28.98■■■□□ 2.23
SYNGR3-201ENST00000248121 SEPT12Q8IYM1 358 aa28.98■■■□□ 2.23
SYNGR3-201ENST00000248121 ONECUT3O60422 494 aaPredicted RBP28.97■■■□□ 2.23
SYNGR3-201ENST00000248121 GSPT1P15170 499 aaKnown RBP28.97■■■□□ 2.23
SYNGR3-201ENST00000248121 PALLDQ8WX93 1383 aa28.97■■■□□ 2.23
SYNGR3-201ENST00000248121 EXOC6BQ9Y2D4 811 aa28.97■■■□□ 2.23
SYNGR3-201ENST00000248121 CYP19A1P11511 503 aaPredicted RBP28.96■■■□□ 2.23
SYNGR3-201ENST00000248121 MYD88Q99836 296 aa28.96■■■□□ 2.23
SYNGR3-201ENST00000248121 UPF2Q9HAU5 1272 aaKnown RBP28.96■■■□□ 2.23
SYNGR3-201ENST00000248121 ZNF330Q9Y3S2 320 aaPredicted RBP28.95■■■□□ 2.23
SYNGR3-201ENST00000248121 BCL11AQ9H165 835 aa28.95■■■□□ 2.22
SYNGR3-201ENST00000248121 MYH14Q7Z406 1995 aaKnown RBP28.95■■■□□ 2.22
SYNGR3-201ENST00000248121 SLC4A3P48751 1232 aa28.94■■■□□ 2.22
SYNGR3-201ENST00000248121 LINS1Q8NG48 757 aa28.94■■■□□ 2.22
SYNGR3-201ENST00000248121 METTL22Q9BUU2 404 aaPredicted RBP28.94■■■□□ 2.22
SYNGR3-201ENST00000248121 CICQ96RK0 1608 aaPredicted RBP28.94■■■□□ 2.22
SYNGR3-201ENST00000248121 MFAP1P55081 439 aaKnown RBP28.93■■■□□ 2.22
SYNGR3-201ENST00000248121 ZBTB1Q9Y2K1 713 aa28.93■■■□□ 2.22
SYNGR3-201ENST00000248121 COL5A3P25940 1745 aaPredicted RBP28.93■■■□□ 2.22
SYNGR3-201ENST00000248121 ALDH1L1O75891 902 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 ITPK1Q13572 414 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 TTC22Q5TAA0 569 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 SSH3Q8TE77 659 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 TEX13AQ9BXU3 409 aaPredicted RBP28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 LOC102724428A0A0B4J2F2 783 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 STARD3NLO95772 234 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 SIK1P57059 783 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 PLBD2Q8NHP8 589 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 ZBTB3Q9H5J0 574 aa28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 IBTKQ9P2D0 1353 aaPredicted RBP28.92■■■□□ 2.22
SYNGR3-201ENST00000248121 NEURL1BA8MQ27 555 aa28.91■■■□□ 2.22
SYNGR3-201ENST00000248121 ATP5J2-PTCD1G3V325 749 aa28.9■■■□□ 2.22
SYNGR3-201ENST00000248121 POLA2Q14181 598 aa28.9■■■□□ 2.22
SYNGR3-201ENST00000248121 ATP6V1AP38606 617 aa28.9■■■□□ 2.22
SYNGR3-201ENST00000248121 KCNQ4P56696 695 aa28.9■■■□□ 2.22
SYNGR3-201ENST00000248121 PPP1R42Q7Z4L9 355 aa28.9■■■□□ 2.22
SYNGR3-201ENST00000248121 RREB1Q92766 1687 aa28.89■■■□□ 2.22
SYNGR3-201ENST00000248121 TBC1D9Q6ZT07 1266 aa28.88■■■□□ 2.21
SYNGR3-201ENST00000248121 C9orf78Q9NZ63 289 aaPredicted RBP28.88■■■□□ 2.21
SYNGR3-201ENST00000248121 JARID2Q92833 1246 aaPredicted RBP28.87■■■□□ 2.21
SYNGR3-201ENST00000248121 C22orf23Q9BZE7 217 aa28.87■■■□□ 2.21
SYNGR3-201ENST00000248121 NEXNQ0ZGT2 675 aa28.87■■■□□ 2.21
SYNGR3-201ENST00000248121 SALL3Q9BXA9 1300 aa28.87■■■□□ 2.21
SYNGR3-201ENST00000248121 GRM8O00222 908 aa28.86■■■□□ 2.21
SYNGR3-201ENST00000248121 LRRCC1Q9C099 1032 aa28.86■■■□□ 2.21
SYNGR3-201ENST00000248121 GCKRQ14397 625 aa28.85■■■□□ 2.21
SYNGR3-201ENST00000248121 KAZALD1Q96I82 304 aa28.85■■■□□ 2.21
SYNGR3-201ENST00000248121 ZNF831Q5JPB2 1677 aa28.85■■■□□ 2.21
SYNGR3-201ENST00000248121 SUCLG2Q96I99 432 aa28.85■■■□□ 2.21
SYNGR3-201ENST00000248121 INTS5Q6P9B9 1019 aaKnown RBP28.84■■■□□ 2.21
SYNGR3-201ENST00000248121 OSBPL3Q9H4L5 887 aa28.84■■■□□ 2.21
SYNGR3-201ENST00000248121 UTYO14607 1347 aa28.84■■■□□ 2.21
SYNGR3-201ENST00000248121 SRGAP3O43295 1099 aa28.84■■■□□ 2.21
SYNGR3-201ENST00000248121 CRKLP46109 303 aaKnown RBP28.83■■■□□ 2.21
SYNGR3-201ENST00000248121 CDC45O75419 566 aa28.82■■■□□ 2.2
SYNGR3-201ENST00000248121 PDE1AP54750 535 aa28.82■■■□□ 2.2
SYNGR3-201ENST00000248121 SMARCC1Q92922 1105 aaPredicted RBP28.82■■■□□ 2.2
SYNGR3-201ENST00000248121 NUP98P52948 1817 aa28.82■■■□□ 2.2
SYNGR3-201ENST00000248121 LY75O60449 1722 aa28.82■■■□□ 2.2
SYNGR3-201ENST00000248121 MTX1Q13505 466 aa28.82■■■□□ 2.2
SYNGR3-201ENST00000248121 ARXQ96QS3 562 aa28.81■■■□□ 2.2
SYNGR3-201ENST00000248121 ANKRD36CQ5JPF3 1778 aa28.81■■■□□ 2.2
SYNGR3-201ENST00000248121 SDSP20132 328 aa28.8■■■□□ 2.2
SYNGR3-201ENST00000248121 LINC00116Q8NCU8 138 aa28.8■■■□□ 2.2
SYNGR3-201ENST00000248121 TUBGCP6Q96RT7 1819 aa28.8■■■□□ 2.2
SYNGR3-201ENST00000248121 SURF6O75683 361 aaKnown RBP28.79■■■□□ 2.2
SYNGR3-201ENST00000248121 HLFQ16534 295 aa28.79■■■□□ 2.2
SYNGR3-201ENST00000248121 CCDC87Q9NVE4 849 aa28.79■■■□□ 2.2
SYNGR3-201ENST00000248121 EPHA10Q5JZY3 1008 aa28.79■■■□□ 2.2
SYNGR3-201ENST00000248121 DAXXQ9UER7 740 aaPredicted RBP28.79■■■□□ 2.2
SYNGR3-201ENST00000248121 RBM25P49756 843 aaKnown RBP28.78■■■□□ 2.2
SYNGR3-201ENST00000248121 BICC1Q9H694 974 aaKnown RBP28.78■■■□□ 2.2
SYNGR3-201ENST00000248121 TAF1LQ8IZX4 1826 aa28.78■■■□□ 2.2
SYNGR3-201ENST00000248121 MAP3K15Q6ZN16 1313 aa28.78■■■□□ 2.2
SYNGR3-201ENST00000248121 UBE3BQ7Z3V4 1068 aa28.78■■■□□ 2.2
SYNGR3-201ENST00000248121 TSHZ3Q63HK5 1081 aa28.77■■■□□ 2.2
SYNGR3-201ENST00000248121 ZNF772Q68DY9 489 aaPredicted RBP28.77■■■□□ 2.2
SYNGR3-201ENST00000248121 KIF6Q6ZMV9 814 aa28.77■■■□□ 2.2
SYNGR3-201ENST00000248121 TBC1D2BQ9UPU7 963 aa28.77■■■□□ 2.2
SYNGR3-201ENST00000248121 RAB11FIP3O75154 756 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms