RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ZPR1O75312 459 aa18.62■□□□□ 0.57
SIN3B-201ENST00000248054 HMGN5P82970 282 aaKnown RBP18.62■□□□□ 0.57
SIN3B-201ENST00000248054 TRIM22Q8IYM9 498 aa18.62■□□□□ 0.57
SIN3B-201ENST00000248054 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
SIN3B-201ENST00000248054 LARP1BQ659C4 914 aaKnown RBP18.62■□□□□ 0.57
SIN3B-201ENST00000248054 UBE3BQ7Z3V4 1068 aa18.62■□□□□ 0.57
SIN3B-201ENST00000248054 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
SIN3B-201ENST00000248054 CASTP20810 708 aaKnown RBP18.61■□□□□ 0.57
SIN3B-201ENST00000248054 TRMT2AQ8IZ69 625 aaKnown RBP18.61■□□□□ 0.57
SIN3B-201ENST00000248054 SLC5A1P13866 664 aa18.61■□□□□ 0.57
SIN3B-201ENST00000248054 PDE1AP54750 535 aa18.61■□□□□ 0.57
SIN3B-201ENST00000248054 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
SIN3B-201ENST00000248054 ZBTB3Q9H5J0 574 aa18.61■□□□□ 0.57
SIN3B-201ENST00000248054 CAMSAP1Q5T5Y3 1602 aa18.61■□□□□ 0.57
SIN3B-201ENST00000248054 NPHP4O75161 1426 aaPredicted RBP18.61■□□□□ 0.57
SIN3B-201ENST00000248054 COPS6Q7L5N1 327 aa18.61■□□□□ 0.57
SIN3B-201ENST00000248054 USP6P35125 1406 aa18.6■□□□□ 0.57
SIN3B-201ENST00000248054 CEP152O94986 1710 aa18.6■□□□□ 0.57
SIN3B-201ENST00000248054 RNF214Q8ND24 703 aa18.6■□□□□ 0.57
SIN3B-201ENST00000248054 ORAI2Q96SN7 254 aa18.6■□□□□ 0.57
SIN3B-201ENST00000248054 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
SIN3B-201ENST00000248054 DDX21Q9NR30 783 aaKnown RBP eCLIP18.6■□□□□ 0.57
SIN3B-201ENST00000248054 ROBO2Q9HCK4 1378 aa18.6■□□□□ 0.57
SIN3B-201ENST00000248054 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
SIN3B-201ENST00000248054 TTF1Q15361 905 aaPredicted RBP18.6■□□□□ 0.57
SIN3B-201ENST00000248054 AIDAQ96BJ3 306 aa18.6■□□□□ 0.57
SIN3B-201ENST00000248054 CEP89Q96ST8 783 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 TTC41PQ6P2S7 1318 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 CBX1P83916 185 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 SETQ01105 290 aaPredicted RBP18.59■□□□□ 0.57
SIN3B-201ENST00000248054 BCORL1Q5H9F3 1711 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 ANKARQ7Z5J8 1434 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 KINO60870 393 aaKnown RBP18.59■□□□□ 0.57
SIN3B-201ENST00000248054 ANAPC15P60006 121 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 CAVIN4Q5BKX8 364 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 TSPY26PQ9H489 355 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
SIN3B-201ENST00000248054 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
SIN3B-201ENST00000248054 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.57
SIN3B-201ENST00000248054 HSPA2P54652 639 aa18.58■□□□□ 0.57
SIN3B-201ENST00000248054 VPS53Q5VIR6 699 aa18.58■□□□□ 0.57
SIN3B-201ENST00000248054 ABCA6Q8N139 1617 aa18.58■□□□□ 0.57
SIN3B-201ENST00000248054 CREBRFQ8IUR6 639 aa18.58■□□□□ 0.57
SIN3B-201ENST00000248054 ZNF521Q96K83 1311 aa18.58■□□□□ 0.56
SIN3B-201ENST00000248054 ZC3H13Q5T200 1668 aaKnown RBP18.58■□□□□ 0.56
SIN3B-201ENST00000248054 IDH1O75874 414 aaKnown RBP18.58■□□□□ 0.56
SIN3B-201ENST00000248054 MAP3K12Q12852 859 aa18.58■□□□□ 0.56
SIN3B-201ENST00000248054 CFAP45Q9UL16 551 aa18.58■□□□□ 0.56
SIN3B-201ENST00000248054 TNNQ9UQP3 1299 aa18.58■□□□□ 0.56
SIN3B-201ENST00000248054 ANXA1P04083 346 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 SDSP20132 328 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 HOMER1Q86YM7 354 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 NFATC2IPQ8NCF5 419 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 SDF4Q9BRK5 362 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 ACBD3Q9H3P7 528 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 ALKQ9UM73 1620 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 RRP12Q5JTH9 1297 aaKnown RBP18.57■□□□□ 0.56
SIN3B-201ENST00000248054 WASF1Q92558 559 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 TDO2P48775 406 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 ZNF592Q92610 1267 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
SIN3B-201ENST00000248054 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
SIN3B-201ENST00000248054 CCP110O43303 1012 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 FOSBP53539 338 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 SLC39A6Q13433 755 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 RAI14Q9P0K7 980 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 LIMCH1Q9UPQ0 1083 aa18.57■□□□□ 0.56
SIN3B-201ENST00000248054 AGLP35573 1532 aa18.56■□□□□ 0.56
SIN3B-201ENST00000248054 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
SIN3B-201ENST00000248054 STK38Q15208 465 aa18.56■□□□□ 0.56
SIN3B-201ENST00000248054 FIBPO43427 364 aa18.56■□□□□ 0.56
SIN3B-201ENST00000248054 CTDP1Q9Y5B0 961 aaPredicted RBP18.56■□□□□ 0.56
SIN3B-201ENST00000248054 CABLES1Q8TDN4 633 aa18.56■□□□□ 0.56
SIN3B-201ENST00000248054 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
SIN3B-201ENST00000248054 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
SIN3B-201ENST00000248054 CCDC85AQ96PX6 553 aaPredicted RBP18.55■□□□□ 0.56
SIN3B-201ENST00000248054 PES1O00541 588 aaKnown RBP18.55■□□□□ 0.56
SIN3B-201ENST00000248054 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
SIN3B-201ENST00000248054 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
SIN3B-201ENST00000248054 UQCRFS1P1P0C7P4 283 aa18.54■□□□□ 0.56
SIN3B-201ENST00000248054 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
SIN3B-201ENST00000248054 STK3Q13188 491 aa18.54■□□□□ 0.56
SIN3B-201ENST00000248054 LDHAL6AQ6ZMR3 332 aa18.54■□□□□ 0.56
SIN3B-201ENST00000248054 SNX21Q969T3 373 aa18.54■□□□□ 0.56
SIN3B-201ENST00000248054 SF3B2Q13435 895 aaKnown RBP18.54■□□□□ 0.56
SIN3B-201ENST00000248054 ZNF790Q6PG37 636 aa18.54■□□□□ 0.56
SIN3B-201ENST00000248054 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
SIN3B-201ENST00000248054 ZFYP08048 801 aaPredicted RBP18.53■□□□□ 0.56
SIN3B-201ENST00000248054 DDB1Q16531 1140 aa18.53■□□□□ 0.56
SIN3B-201ENST00000248054 BRPF1P55201 1214 aaPredicted RBP18.53■□□□□ 0.56
SIN3B-201ENST00000248054 RAD21O60216 631 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 BICDL1Q6ZP65 573 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 MNS1Q8NEH6 495 aa18.52■□□□□ 0.56
SIN3B-201ENST00000248054 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms