RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 CCDC94Q9BW85 323 aaPredicted RBP8.57□□□□□ -1.04
MED28-201ENST00000237380 KIF22Q14807 665 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 MAP2K1Q02750 393 aaPredicted RBP8.57□□□□□ -1.04
MED28-201ENST00000237380 ALS2CR12Q96Q35 445 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 CCDC194A0A1B0GVG4 234 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 SYCP3Q8IZU3 236 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 SPC25Q9HBM1 224 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 KIAA1107Q9UPP5 1409 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 CAMSAP2Q08AD1 1489 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 LMAN1P49257 510 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 TAF7Q15545 349 aaPredicted RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 ELMSAN1Q6PJG2 1045 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 FAM114A2Q9NRY5 505 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 DENND4BO75064 1496 aaPredicted RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 ZNF213O14771 459 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 BICDL1Q6ZP65 573 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 TNMDQ9H2S6 317 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 IKBKGQ9Y6K9 419 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 IGF1RP08069 1367 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 NBPF7P0C2Y1 421 aaPredicted RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 FILIP1Q7Z7B0 1213 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 SSRP1Q08945 709 aaKnown RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 TSPYL1Q9H0U9 437 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 KAT14Q9H8E8 782 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 ORC3Q9UBD5 711 aaPredicted RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 TRMT112Q9UI30 125 aaKnown RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 SLC12A7Q9Y666 1083 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 RMND1Q9NWS8 449 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 BIN2Q9UBW5 565 aaPredicted RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 ATP2B1P20020 1258 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 FOXD4L6Q3SYB3 417 aaPredicted RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 FOXD4L3Q6VB84 417 aaPredicted RBP8.56□□□□□ -1.04
MED28-201ENST00000237380 PDE4AP27815 886 aa8.56□□□□□ -1.04
MED28-201ENST00000237380 MAST3O60307 1309 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 UBAP1LF5GYI3 381 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 CLIP2Q9UDT6 1046 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 ODF2LQ9ULJ1 636 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 FSD2A1L4K1 749 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 ZSCAN12O43309 604 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 ZWINTO95229 277 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 DYDC1Q8WWB3 177 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 GLT8D2Q9H1C3 349 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 PTPRCP08575 1304 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 ADGRL1O94910 1474 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
MED28-201ENST00000237380 SMC1AQ14683 1233 aaKnown RBP8.55□□□□□ -1.04
MED28-201ENST00000237380 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 DDX11Q96FC9 970 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 CNNM2Q9H8M5 875 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 SAMM50Q9Y512 469 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 SRGAP3O43295 1099 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 SYNCQ9H7C4 482 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 GSTTP1A0A1W2PQM5 241 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 ZMYND15Q9H091 742 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 PNMA2Q9UL42 364 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 MAP3K11Q16584 847 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 C6orf163Q5TEZ5 329 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 PODXL2Q9NZ53 605 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 CCDC171Q6TFL3 1326 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 NDC80O14777 642 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
MED28-201ENST00000237380 TAX1BP1Q86VP1 789 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 BICD1Q96G01 975 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 CEP63Q96MT8 703 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 LNPKQ9C0E8 428 aa8.55□□□□□ -1.04
MED28-201ENST00000237380 CACYBPQ9HB71 228 aaKnown RBP8.55□□□□□ -1.04
MED28-201ENST00000237380 TCIRG1Q13488 830 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 LARP1BQ659C4 914 aaKnown RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 GPHNQ9NQX3 736 aaPredicted RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 NLRP3Q96P20 1036 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 CWC25Q9NXE8 425 aaPredicted RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 RPRD2Q5VT52 1461 aaKnown RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 ADAMTS2O95450 1211 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 CALM1P0DP23 149 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 CALM2P0DP24 149 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 CALM3P0DP25 149 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 GNAT2P19087 354 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 EIF6P56537 245 aaKnown RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 GOLGA6L9A6NEM1 432 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 ZFYP08048 801 aaPredicted RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 FOSBP53539 338 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 BIRC2Q13490 618 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 CKAP2LQ8IYA6 745 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 TBCAO75347 108 aaKnown RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 CALML3P27482 149 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 ANKRD2Q9GZV1 360 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 DBF4Q9UBU7 674 aaPredicted RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 NBPF6Q5VWK0 638 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 NBPF5PQ86XG9 351 aaPredicted RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 NBPF4Q96M43 638 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 KRT23Q9C075 422 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 TTLL5Q6EMB2 1281 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 FLAD1Q8NFF5 587 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 PAFAH1B1P43034 410 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms