RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
PRAMEF4-201ENST00000235349 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
PRAMEF4-201ENST00000235349 DDX58O95786 925 aaKnown RBP12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 IGKV5-2P06315 115 aa12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 RXRBP28702 533 aa12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
PRAMEF4-201ENST00000235349 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.38
PRAMEF4-201ENST00000235349 MYD88Q99836 296 aa12.71□□□□□ -0.38
PRAMEF4-201ENST00000235349 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.38
PRAMEF4-201ENST00000235349 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.38
PRAMEF4-201ENST00000235349 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.38
PRAMEF4-201ENST00000235349 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.38
PRAMEF4-201ENST00000235349 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
PRAMEF4-201ENST00000235349 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
PRAMEF4-201ENST00000235349 BACH2Q9BYV9 841 aa12.7□□□□□ -0.38
PRAMEF4-201ENST00000235349 ATP10DQ9P241 1426 aa12.7□□□□□ -0.38
PRAMEF4-201ENST00000235349 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 TRIM37O94972 964 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 PDE4AP27815 886 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 FAM196AQ6ZSG2 479 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 ARXQ96QS3 562 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 ZBTB3Q9H5J0 574 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 NUP188Q5SRE5 1749 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 ALDH1L1O75891 902 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 LINS1Q8NG48 757 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
PRAMEF4-201ENST00000235349 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
PRAMEF4-201ENST00000235349 GNAI2P04899 355 aa12.68□□□□□ -0.38
PRAMEF4-201ENST00000235349 GNAI3P08754 354 aa12.68□□□□□ -0.38
PRAMEF4-201ENST00000235349 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
PRAMEF4-201ENST00000235349 SMIM5Q71RC9 77 aa12.68□□□□□ -0.38
PRAMEF4-201ENST00000235349 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
PRAMEF4-201ENST00000235349 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 HLFQ16534 295 aa12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 NUP98P52948 1817 aa12.67□□□□□ -0.38
PRAMEF4-201ENST00000235349 LY75O60449 1722 aa12.66□□□□□ -0.38
PRAMEF4-201ENST00000235349 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
PRAMEF4-201ENST00000235349 NEXNQ0ZGT2 675 aa12.66□□□□□ -0.38
PRAMEF4-201ENST00000235349 GCKRQ14397 625 aa12.66□□□□□ -0.38
PRAMEF4-201ENST00000235349 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
PRAMEF4-201ENST00000235349 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
PRAMEF4-201ENST00000235349 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
PRAMEF4-201ENST00000235349 GRM8O00222 908 aa12.65□□□□□ -0.38
PRAMEF4-201ENST00000235349 LRRC4BQ9NT99 713 aa12.65□□□□□ -0.38
PRAMEF4-201ENST00000235349 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
PRAMEF4-201ENST00000235349 CICQ96RK0 1608 aaPredicted RBP12.65□□□□□ -0.38
PRAMEF4-201ENST00000235349 ZNF831Q5JPB2 1677 aa12.65□□□□□ -0.38
PRAMEF4-201ENST00000235349 RREB1Q92766 1687 aa12.65□□□□□ -0.38
PRAMEF4-201ENST00000235349 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.39
PRAMEF4-201ENST00000235349 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.39
PRAMEF4-201ENST00000235349 ATP8B2P98198 1209 aa12.65□□□□□ -0.39
PRAMEF4-201ENST00000235349 TCIRG1Q13488 830 aa12.65□□□□□ -0.39
PRAMEF4-201ENST00000235349 KIF6Q6ZMV9 814 aa12.65□□□□□ -0.39
PRAMEF4-201ENST00000235349 SMC5Q8IY18 1101 aa12.65□□□□□ -0.39
PRAMEF4-201ENST00000235349 KAZALD1Q96I82 304 aa12.65□□□□□ -0.39
PRAMEF4-201ENST00000235349 UTYO14607 1347 aa12.64□□□□□ -0.39
PRAMEF4-201ENST00000235349 DZIP3Q86Y13 1208 aaKnown RBP12.64□□□□□ -0.39
PRAMEF4-201ENST00000235349 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
PRAMEF4-201ENST00000235349 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
PRAMEF4-201ENST00000235349 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
PRAMEF4-201ENST00000235349 DCTPP1Q9H773 170 aa12.63□□□□□ -0.39
PRAMEF4-201ENST00000235349 A0A087WZG4 1122 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 RGS3P49796 1198 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 EPHA10Q5JZY3 1008 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 GIGYF2Q6Y7W6 1299 aaKnown RBP12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 PROM2Q8N271 834 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 GPTP24298 496 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 CASP7P55210 303 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
PRAMEF4-201ENST00000235349 H7C1W4 665 aa12.61□□□□□ -0.39
PRAMEF4-201ENST00000235349 ANKRD45Q5TZF3 282 aa12.61□□□□□ -0.39
PRAMEF4-201ENST00000235349 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
PRAMEF4-201ENST00000235349 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
PRAMEF4-201ENST00000235349 CNTNAP4Q9C0A0 1308 aa12.61□□□□□ -0.39
PRAMEF4-201ENST00000235349 ERVV-1B6SEH8 477 aa12.6□□□□□ -0.39
PRAMEF4-201ENST00000235349 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
PRAMEF4-201ENST00000235349 NUCB1Q02818 461 aa12.6□□□□□ -0.39
PRAMEF4-201ENST00000235349 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
PRAMEF4-201ENST00000235349 ILDR1Q86SU0 546 aaPredicted RBP12.6□□□□□ -0.39
PRAMEF4-201ENST00000235349 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
PRAMEF4-201ENST00000235349 SSH3Q8TE77 659 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms