RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
CD4-201ENST00000011653 TOGARAM1Q9Y4F4 1720 aa13.15□□□□□ -0.3
CD4-201ENST00000011653 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
CD4-201ENST00000011653 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
CD4-201ENST00000011653 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.3
CD4-201ENST00000011653 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.31
CD4-201ENST00000011653 GPTP24298 496 aa13.14□□□□□ -0.31
CD4-201ENST00000011653 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
CD4-201ENST00000011653 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
CD4-201ENST00000011653 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
CD4-201ENST00000011653 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
CD4-201ENST00000011653 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
CD4-201ENST00000011653 CCNL1Q9UK58 526 aaPredicted RBP13.13□□□□□ -0.31
CD4-201ENST00000011653 PHF14O94880 888 aa13.13□□□□□ -0.31
CD4-201ENST00000011653 NBPF7P0C2Y1 421 aaPredicted RBP13.13□□□□□ -0.31
CD4-201ENST00000011653 CYP19A1P11511 503 aaPredicted RBP13.13□□□□□ -0.31
CD4-201ENST00000011653 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
CD4-201ENST00000011653 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
CD4-201ENST00000011653 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
CD4-201ENST00000011653 RGS12O14924 1447 aa13.12□□□□□ -0.31
CD4-201ENST00000011653 MRC1P22897 1456 aa13.12□□□□□ -0.31
CD4-201ENST00000011653 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
CD4-201ENST00000011653 ITGB4P16144 1822 aa13.12□□□□□ -0.31
CD4-201ENST00000011653 ADCY9O60503 1353 aa13.12□□□□□ -0.31
CD4-201ENST00000011653 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
CD4-201ENST00000011653 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
CD4-201ENST00000011653 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
CD4-201ENST00000011653 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
CD4-201ENST00000011653 SIPA1L3O60292 1781 aaPredicted RBP13.11□□□□□ -0.31
CD4-201ENST00000011653 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
CD4-201ENST00000011653 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
CD4-201ENST00000011653 FAM196AQ6ZSG2 479 aa13.11□□□□□ -0.31
CD4-201ENST00000011653 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
CD4-201ENST00000011653 BEND3Q5T5X7 828 aa13.11□□□□□ -0.31
CD4-201ENST00000011653 C5P01031 1676 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 BECN1Q14457 450 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 KIF6Q6ZMV9 814 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
CD4-201ENST00000011653 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 ADAMTS7Q9UKP4 1686 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 KCPQ6ZWJ8 1503 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 APBA3O96018 575 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
CD4-201ENST00000011653 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
CD4-201ENST00000011653 HLFQ16534 295 aa13.09□□□□□ -0.31
CD4-201ENST00000011653 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
CD4-201ENST00000011653 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
CD4-201ENST00000011653 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
CD4-201ENST00000011653 GNPATO15228 680 aa13.09□□□□□ -0.31
CD4-201ENST00000011653 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
CD4-201ENST00000011653 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
CD4-201ENST00000011653 UBE3BQ7Z3V4 1068 aa13.08□□□□□ -0.31
CD4-201ENST00000011653 LRP10Q7Z4F1 713 aa13.08□□□□□ -0.31
CD4-201ENST00000011653 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.31
CD4-201ENST00000011653 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.32
CD4-201ENST00000011653 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
CD4-201ENST00000011653 GNAI2P04899 355 aa13.08□□□□□ -0.32
CD4-201ENST00000011653 A0A087WZG4 1122 aa13.08□□□□□ -0.32
CD4-201ENST00000011653 SIRT2Q8IXJ6 389 aa13.07□□□□□ -0.32
CD4-201ENST00000011653 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
CD4-201ENST00000011653 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
CD4-201ENST00000011653 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
CD4-201ENST00000011653 LINS1Q8NG48 757 aa13.07□□□□□ -0.32
CD4-201ENST00000011653 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
CD4-201ENST00000011653 GNAI3P08754 354 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 ANKRD45Q5TZF3 282 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 SEC24BO95487 1268 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 FGD1P98174 961 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 ZMYND15Q9H091 742 aa13.06□□□□□ -0.32
CD4-201ENST00000011653 GRM8O00222 908 aa13.05□□□□□ -0.32
CD4-201ENST00000011653 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
CD4-201ENST00000011653 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
CD4-201ENST00000011653 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
CD4-201ENST00000011653 AMIGO3Q86WK7 504 aa13.05□□□□□ -0.32
CD4-201ENST00000011653 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
CD4-201ENST00000011653 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
CD4-201ENST00000011653 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
CD4-201ENST00000011653 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
CD4-201ENST00000011653 GCKRQ14397 625 aa13.04□□□□□ -0.32
CD4-201ENST00000011653 AK7Q96M32 723 aa13.04□□□□□ -0.32
CD4-201ENST00000011653 GOLGB1Q14789 3259 aaKnown RBP13.04□□□□□ -0.32
CD4-201ENST00000011653 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
CD4-201ENST00000011653 SUCLG2Q96I99 432 aa13.04□□□□□ -0.32
CD4-201ENST00000011653 SIL1Q9H173 461 aa13.04□□□□□ -0.32
CD4-201ENST00000011653 PPP1R42Q7Z4L9 355 aa13.04□□□□□ -0.32
CD4-201ENST00000011653 KLHDC4Q8TBB5 520 aa13.04□□□□□ -0.32
CD4-201ENST00000011653 IL6STP40189 918 aaPredicted RBP13.03□□□□□ -0.32
CD4-201ENST00000011653 OS9Q13438 667 aaPredicted RBP13.03□□□□□ -0.32
CD4-201ENST00000011653 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
CD4-201ENST00000011653 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
CD4-201ENST00000011653 ERBB4Q15303 1308 aa13.03□□□□□ -0.32
CD4-201ENST00000011653 NPHP1O15259 732 aa13.03□□□□□ -0.32
CD4-201ENST00000011653 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms