RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 EPS8L3Q8TE67 593 aaKnown RBP16.4■□□□□ 0.22
PTPN11-207ENST00000639857 PPWD1Q96BP3 646 aaKnown RBP16.4■□□□□ 0.22
PTPN11-207ENST00000639857 CNPPD1Q9BV87 410 aa16.4■□□□□ 0.22
PTPN11-207ENST00000639857 FAIM2Q9BWQ8 316 aa16.4■□□□□ 0.22
PTPN11-207ENST00000639857 GSTO2Q9H4Y5 243 aa16.4■□□□□ 0.22
PTPN11-207ENST00000639857 CXorf21Q9HAI6 301 aa16.4■□□□□ 0.22
PTPN11-207ENST00000639857 PCDHA9Q9Y5H5 950 aa16.4■□□□□ 0.22
PTPN11-207ENST00000639857 GOLGA6L10A6NI86 522 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 NPIPA5E9PKD4 350 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 PLIN3O60664 434 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 GSTM5P46439 218 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 SLC37A1P57057 533 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 ERVK-8P63133 956 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 SRSF11Q05519 484 aaKnown RBP16.39■□□□□ 0.21
PTPN11-207ENST00000639857 SPIN4Q56A73 249 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 C6orf163Q5TEZ5 329 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 C1QL3Q5VWW1 255 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 SLC48A1Q6P1K1 146 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 EMBQ6PCB8 327 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 IL20RBQ6UXL0 311 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 C16orf47Q6ZP98 133 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-207ENST00000639857 DGAT2L6Q6ZPD8 337 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 RGS9BPQ6ZS82 235 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 FJX1Q86VR8 437 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 GALNT12Q8IXK2 581 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 AGAP11Q8TF27 550 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 SHCBP1LQ9BZQ2 653 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 LIN28AQ9H9Z2 209 aaKnown RBP16.39■□□□□ 0.21
PTPN11-207ENST00000639857 MKS1Q9NXB0 559 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 SUCOQ9UBS9 1254 aaKnown RBP16.39■□□□□ 0.21
PTPN11-207ENST00000639857 MCM8Q9UJA3 840 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 PSME2Q9UL46 239 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 NPIPA1Q9UND3 350 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 ERVK-19Q9WJR5 959 aa16.39■□□□□ 0.21
PTPN11-207ENST00000639857 NCOA6Q14686 2063 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-207ENST00000639857 TRGV8A0A0C4DH27 118 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 COPEO14579 308 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 TFECO14948 347 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-207ENST00000639857 PGRMC2O15173 223 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 CPMP14384 443 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 KRT4P19013 534 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 VSNL1P62760 191 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 SLC18A2Q05940 514 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 FUT7Q11130 342 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 ZNF267Q14586 743 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-207ENST00000639857 EBPQ15125 230 aaKnown RBP16.38■□□□□ 0.21
PTPN11-207ENST00000639857 RNFT1Q5M7Z0 435 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 WDR93Q6P2C0 686 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 GK5Q6ZS86 529 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 FRMD7Q6ZUT3 714 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 SPPL2CQ8IUH8 684 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 C1orf52Q8N6N3 182 aaKnown RBP16.38■□□□□ 0.21
PTPN11-207ENST00000639857 OR7G1Q8NGA0 311 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 CHTF18Q8WVB6 975 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 WWTR1Q9GZV5 400 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 SIRT5Q9NXA8 310 aa16.38■□□□□ 0.21
PTPN11-207ENST00000639857 SMIM23A6NLE4 172 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 ACOT7O00154 380 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 HRKO00198 91 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 ATP1B1P05026 303 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 PORP16435 677 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-207ENST00000639857 XKP51811 444 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 ACSM2AQ08AH3 577 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 ASPHQ12797 758 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 ZNF791Q3KP31 576 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-207ENST00000639857 TCHHL1Q5QJ38 904 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-207ENST00000639857 ACSM2BQ68CK6 577 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 GALNT18Q6P9A2 607 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 RPTNQ6XPR3 784 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 SAMD14Q8IZD0 417 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-207ENST00000639857 EID3Q8N140 333 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 CCNYL1Q8N7R7 359 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 C17orf47Q8NEP4 570 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 OR2M7Q8NG81 312 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 AENQ8WTP8 325 aaKnown RBP16.37■□□□□ 0.21
PTPN11-207ENST00000639857 TP53INP1Q96A56 240 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 TM4SF18Q96CE8 201 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 SPACA9Q96E40 222 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-207ENST00000639857 HBEGFQ99075 208 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 FAM173AQ9BQD7 235 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 ACPTQ9BZG2 426 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 TSPAN10Q9H1Z9 355 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-207ENST00000639857 MID1IP1Q9NPA3 183 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 SACM1LQ9NTJ5 587 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 OXSMQ9NWU1 459 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 CES1P1Q9UKY3 287 aa16.37■□□□□ 0.21
PTPN11-207ENST00000639857 UTP20O75691 2785 aaKnown RBP16.36■□□□□ 0.21
PTPN11-207ENST00000639857 WASHC1A8K0Z3 465 aa16.36■□□□□ 0.21
PTPN11-207ENST00000639857 CCL21O00585 134 aa16.36■□□□□ 0.21
PTPN11-207ENST00000639857 SLU7O95391 586 aaKnown RBP16.36■□□□□ 0.21
PTPN11-207ENST00000639857 NADKO95544 446 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-207ENST00000639857 CLDN1O95832 211 aa16.36■□□□□ 0.21
PTPN11-207ENST00000639857 CLPSP04118 112 aa16.36■□□□□ 0.21
PTPN11-207ENST00000639857 DRD2P14416 443 aa16.36■□□□□ 0.21
PTPN11-207ENST00000639857 CPA3P15088 417 aa16.36■□□□□ 0.21
PTPN11-207ENST00000639857 CSNK2A2P19784 350 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-207ENST00000639857 CNR1P21554 472 aa16.36■□□□□ 0.21
PTPN11-207ENST00000639857 DEKP35659 375 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms