RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 TBC1D3GQ6DHY5 549 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 TBC1D3CQ6IPX1 549 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 USP30Q70CQ3 517 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 TBC1D3Q8IZP1 549 aaPredicted RBP8.14□□□□□ -1.11
NECAP1-218ENST00000639595 SLC15A4Q8N697 577 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 DYNC2LI1Q8TCX1 351 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 SFXN5Q8TD22 340 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 SLC38A4Q969I6 547 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 HSPBAP1Q96EW2 488 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 SH3YL1Q96HL8 342 aaPredicted RBP8.14□□□□□ -1.11
NECAP1-218ENST00000639595 GALNT8Q9NY28 637 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 SPHK1Q9NYA1 384 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 REV1Q9UBZ9 1251 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 KLF15Q9UIH9 416 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 ATG4BQ9Y4P1 393 aa8.14□□□□□ -1.11
NECAP1-218ENST00000639595 ATG2AQ2TAZ0 1938 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 A0A0G2JN53 185 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 PRSS38A1L453 326 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 TMEM247A6NEH6 219 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 PRR23AA6NEV1 266 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 WASHC1A8K0Z3 465 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 PGRMC2O15173 223 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 ERI3O43414 337 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SERPIND1P05546 499 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 LCKP06239 509 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 OR12D1P0DN82 309 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 IDH2P48735 452 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CDC42P60953 191 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 TP53BP2Q13625 1128 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 LRRC32Q14392 662 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 IRF3Q14653 427 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 PRAMEF8Q5VWM4 474 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 PRAMEF7Q5VXH5 474 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 BHLHB9Q6PI77 547 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 FAM20CQ8IXL6 584 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SUN3Q8TAQ9 357 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 GTPBP3Q969Y2 492 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 LGALS12Q96DT0 336 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 OR2M4Q96R27 311 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 ITPAQ9BY32 194 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SLC6A17Q9H1V8 727 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 OR51I1Q9H343 314 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SEMA3GQ9NS98 782 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CLEC1BQ9P126 229 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 RHCGQ9UBD6 479 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 MGAT4BQ9UQ53 548 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 A0A1W2PRQ8 180 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 M0R082 166 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 FAAHO00519 579 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SLC31A1O15431 190 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 PROM1O43490 865 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SLC28A2O43868 658 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SLITRK5O94991 958 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 ZBTB11O95625 1053 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 H1F0P07305 194 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 OSMP13725 252 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 HOXB3P14651 431 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CD36P16671 472 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 ELAVL4P26378 380 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CMPK1P30085 196 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 NTSP30990 170 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 MAT2AP31153 395 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 NCBP2P52298 156 aaKnown RBP eCLIP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 DGCR6Q14129 220 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SEC23BQ15437 767 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SYPL1Q16563 259 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 FBXO43Q4G163 708 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SLC48A1Q6P1K1 146 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CD300LDQ6UXZ3 194 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 AMIGO1Q86WK6 493 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 KRT73Q86Y46 540 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SLC44A2Q8IWA5 706 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 TAGAPQ8N103 731 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 TMEM145Q8NBT3 493 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 OR4D11Q8NGI4 311 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 OR8K5Q8NH50 307 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 UTP15Q8TED0 518 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 XAGE5Q8WWM1 108 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 MOAP1Q96BY2 351 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CNRIP1Q96F85 164 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SLC35G5Q96KT7 338 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 DACH2Q96NX9 599 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 COL21A1Q96P44 957 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 BBS4Q96RK4 519 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CDCA4Q9BXL8 241 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SYNPO2LQ9H987 977 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 FZD3Q9NPG1 666 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 FBXO8Q9NRD0 319 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 ZCCHC3Q9NUD5 404 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 TBCCD1Q9NVR7 557 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 IMPAD1Q9NX62 359 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CNOT2Q9NZN8 540 aaKnown RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 SEC14L3Q9UDX4 400 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 TBC1D29Q9UFV1 150 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 PNMA8BQ9ULN7 279 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-218ENST00000639595 TMCC3Q9ULS5 477 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
NECAP1-218ENST00000639595 POM121BA6NF01 834 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms