RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 RGS9BPQ6ZS82 235 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 RNF165Q6ZSG1 346 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 RPS27LQ71UM5 84 aaKnown RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 CDYL2Q8N8U2 506 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 PSD4Q8NDX1 1056 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 OR4K14Q8NGD5 310 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 EPS8L3Q8TE67 593 aaKnown RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 AGAP11Q8TF27 550 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 ASB15Q8WXK1 588 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 RIT1Q92963 219 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 ERP27Q96DN0 273 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 MTFMTQ96DP5 389 aaKnown RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 C11orf24Q96F05 449 aaPredicted RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 TMEM109Q9BVC6 243 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 FAIM2Q9BWQ8 316 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 GSTO2Q9H4Y5 243 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 KLHL1Q9NR64 748 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 FARSBQ9NSD9 589 aaKnown RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 HPF1Q9NWY4 346 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 ANKRD10Q9NXR5 420 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 SEC14L3Q9UDX4 400 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 WBP11Q9Y2W2 641 aaKnown RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 PCDHA9Q9Y5H5 950 aa11.54□□□□□ -0.56
LINC00963-217ENST00000624009 NUP214P35658 2090 aaPredicted RBP11.54□□□□□ -0.56
LINC00963-217ENST00000624009 NPIPB8E9PQR5 432 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 OR10H2O60403 315 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 ATP1B1P05026 303 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 CPMP14384 443 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 DRD2P14416 443 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 CPA3P15088 417 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 ZNF24P17028 368 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 SLCO1A2P46721 670 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 SLC37A1P57057 533 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 ID2Q02363 134 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 ASPHQ12797 758 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 LIPMQ5VYY2 423 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 Q6ZPB1 254 aaPredicted RBP11.53□□□□□ -0.56
LINC00963-217ENST00000624009 RTL4Q6ZR62 310 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 TRABD2AQ86V40 505 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 OR4N5Q8IXE1 308 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 GALNT12Q8IXK2 581 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 GHDCQ8N2G8 530 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 OR7G1Q8NGA0 311 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 C16orf52Q8NHV5 167 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 FAM76AQ8TAV0 307 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 SLC22A8Q8TCC7 542 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 TP53INP1Q96A56 240 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 HES7Q9BYE0 225 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 CXorf21Q9HAI6 301 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 TEX10Q9NXF1 929 aaPredicted RBP11.53□□□□□ -0.56
LINC00963-217ENST00000624009 CES1P1Q9UKY3 287 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 ERVK-11Q9UQG0 969 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 OSGIN2Q9Y236 505 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 ZNF835Q9Y2P0 537 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 PLLPQ9Y342 182 aa11.53□□□□□ -0.56
LINC00963-217ENST00000624009 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.56
LINC00963-217ENST00000624009 ESPNB1AK53 854 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 PGRMC2O15173 223 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 PEX1O43933 1283 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 UNC5CO95185 931 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 PORP16435 677 aaPredicted RBP11.52□□□□□ -0.57
LINC00963-217ENST00000624009 TSPAN8P19075 237 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 SOX3P41225 446 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 XKP51811 444 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 NAGLUP54802 743 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 CASP6P55212 293 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 ACSM2AQ08AH3 577 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 SGO1Q5FBB7 561 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 CFAP157Q5JU67 520 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 ACSM2BQ68CK6 577 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 RNF111Q6ZNA4 994 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 SLC29A4Q7RTT9 530 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 TRIM46Q7Z4K8 759 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.52□□□□□ -0.57
LINC00963-217ENST00000624009 SULF2Q8IWU5 870 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 C9orf40Q8IXQ3 194 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 C1orf52Q8N6N3 182 aaKnown RBP11.52□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF321PQ8N8H1 164 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 BANPQ8N9N5 519 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 TM4SF18Q96CE8 201 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 APOPT1Q96IL0 206 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 ACPTQ9BZG2 426 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 IQCGQ9H095 443 aaKnown RBP11.52□□□□□ -0.57
LINC00963-217ENST00000624009 SH2D2AQ9NP31 389 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 MID1IP1Q9NPA3 183 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 PLSCR2Q9NRY7 297 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 EHD3Q9NZN3 535 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 SENP1Q9P0U3 644 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 CFL2Q9Y281 166 aa11.52□□□□□ -0.57
LINC00963-217ENST00000624009 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 GLOD5A6NK44 160 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 WWP2O00308 870 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 LRRTM2O43300 516 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 ASNA1O43681 348 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 PRKRAO75569 313 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 OR6B1O95007 311 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 GBAP04062 536 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 FBXO45P0C2W1 286 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 CSNK2A2P19784 350 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms