RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	PCOLCE	Q15113	449 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	NSDHL	Q15738	373 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	INA	Q16352	499 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	MEP1A	Q16819	746 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	SGO1	Q5FBB7	561 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	XKR7	Q5GH72	579 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	ZNF766	Q5HY98	468 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	LIPJ	Q5W064	366 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	FRG2	Q64ET8	278 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	FCRLB	Q6BAA4	426 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	SP5	Q6BEB4	398 aa	Predicted RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	RPUSD3	Q6P087	351 aa	Known RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	METTL2B	Q6P1Q9	378 aa	Known RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	MED27	Q6P2C8	311 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972		Q6ZSR9	355 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	LANCL3	Q6ZV70	420 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	CD163	Q86VB7	1156 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	SLC22A9	Q8IVM8	553 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	SLC34A3	Q8N130	599 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	CA13	Q8N1Q1	262 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	CCDC63	Q8NA47	563 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	FAM98A	Q8NCA5	519 aa	Known RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	AGR3	Q8TD06	166 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	UBASH3B	Q8TF42	649 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	APIP	Q96GX9	242 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	PEX11G	Q96HA9	241 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	FRG2B	Q96QU4	278 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	LPAR4	Q99677	370 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	BARD1	Q99728	777 aa	Known RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	UTP23	Q9BRU9	249 aa	Known RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	MRPL1	Q9BYD6	325 aa	Known RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	TGIF2	Q9GZN2	237 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	VN1R1	Q9GZP7	353 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	KCNK9	Q9NPC2	374 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	KLHL1	Q9NR64	748 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	PNPO	Q9NVS9	261 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	ARGLU1	Q9NWB6	273 aa	Predicted RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	TEX10	Q9NXF1	929 aa	Predicted RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	ANKRD10	Q9NXR5	420 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	FAM53C	Q9NYF3	392 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	KCMF1	Q9P0J7	381 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	TMCO1	Q9UM00	188 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	DLGAP4	Q9Y2H0	992 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	NAALAD2	Q9Y3Q0	740 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	TNPO3	Q9Y5L0	923 aa	Known RBP	5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	DNAJC15	Q9Y5T4	150 aa		5.49	□□□□□ -1.53
LINC00963-215	ENST00000622972	SVIL	O95425	2214 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	LOC102723996	A0A087X1L8	192 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	MYOCOS	A0A1B0GUC4	107 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	URAD	A6NGE7	173 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972		F8W735	103 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PSMD12	O00232	456 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PIP5K1B	O14986	540 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	BIRC5	O15392	142 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	ERI3	O43414	337 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	CHST10	O43529	356 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	B4GALT2	O60909	372 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	OTC	P00480	354 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	SERPINE1	P05121	402 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	SNRPB2	P08579	225 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	STS	P08842	583 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	ALOX12	P18054	663 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	JAK1	P23458	1154 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	TACR1	P25103	407 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	ATP5A1	P25705	553 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PTGER1	P34995	402 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PLA2G16	P53816	162 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	GYS2	P54840	703 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PKNOX1	P55347	436 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PPP2R2A	P63151	447 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	BTG2	P78543	158 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PMP22	Q01453	160 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	ALDH6A1	Q02252	535 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	RGS1	Q08116	209 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PWP1	Q13610	501 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	HERC3	Q15034	1050 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	KIAA0040	Q15053	153 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	EXT1	Q16394	746 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	MAPKAPK3	Q16644	382 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	SFT2D3	Q587I9	215 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	ACER2	Q5QJU3	275 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	DEPDC1	Q5TB30	811 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	KHDRBS2	Q5VWX1	349 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	C18orf63	Q68DL7	685 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PLAG1	Q6DJT9	500 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	MRM1	Q6IN84	353 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	PAPD4	Q6PIY7	484 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	TMEM205	Q6UW68	189 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	DGAT2L6	Q6ZPD8	337 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	MILR1	Q7Z6M3	343 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	ANKRD37	Q7Z713	158 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	MYLK4	Q86YV6	388 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	NUDCD3	Q8IVD9	361 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	BEST3	Q8N1M1	668 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	SLC5A8	Q8N695	610 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	HORMAD2	Q8N7B1	307 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	TMEM178A	Q8NBL3	297 aa		5.48	□□□□□ -1.53
LINC00963-215	ENST00000622972	OR2L5	Q8NG80	312 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms