RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 RNF215Q9Y6U7 377 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 TSPAN11A1L157 253 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 TRIM46Q7Z4K8 759 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 NPAS3Q8IXF0 933 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 ZNF808Q8N4W9 903 aaPredicted RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 OR4K1Q8NGD4 311 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 OR5H2Q8NGV7 314 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 CDC6Q99741 560 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 PITHD1Q9GZP4 211 aaPredicted RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 SLC6A5Q9Y345 797 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 NDUFS4O43181 175 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 FBXO24O75426 580 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 HLA-EP13747 358 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 ADRA2BP18089 450 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 PPT1P50897 306 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 HNRNPKP61978 463 aaKnown RBP eCLIP11.13□□□□□ -0.633e-7■□□□□ 9.9
CLTC-215ENST00000621829 PUS10Q3MIT2 529 aaKnown RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 KIAA0930Q6ICG6 404 aaPredicted RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 KIAA1211LQ6NV74 962 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 SPARTQ8N0X7 666 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 PIP5K1AQ99755 562 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 DPEP3Q9H4B8 488 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 ICKQ9UPZ9 632 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 A0A1W2PQ09 198 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 BRINP1O60477 761 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 S1PR1P21453 382 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 DIO3P55073 304 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.639e-7■■■□□ 17.4
CLTC-215ENST00000621829 LCN10Q6JVE6 187 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 PAPD5Q8NDF8 572 aaKnown RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 SGTBQ96EQ0 304 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 OCSTAMPQ9BR26 566 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 TMEM59LQ9UK28 342 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 PCDHGA2Q9Y5H1 932 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 CCDC88AQ3V6T2 1871 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 HHLA1C9JL84 531 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 C11orf98E9PRG8 122 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLTC-215ENST00000621829 SNU13P55769 128 aaKnown RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 DUSP6Q16828 381 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 METTL21AQ8WXB1 218 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 TBL1XR1Q9BZK7 514 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 LDB2O43679 373 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 ADH1AP07327 375 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 CYCSP99999 105 aaKnown RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 ZNF678Q5SXM1 525 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 KCNIP4Q6PIL6 250 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 MBOAT1Q6ZNC8 495 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 GLIS1Q8NBF1 620 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 FBXO27Q8NI29 283 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 DOHHQ9BU89 302 aa11.13□□□□□ -0.63
CLTC-215ENST00000621829 METTL17Q9H7H0 456 aaPredicted RBP11.13□□□□□ -0.63
CLTC-215ENST00000621829 C2CD4BA6NLJ0 364 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 SLC2A5P22732 501 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 TRAM2Q15035 370 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 RAB11BQ15907 218 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 GPAT4Q86UL3 456 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 MON1AQ86VX9 555 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 C14orf79Q96F83 325 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 ETV5P41161 510 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 FXYD4P59646 89 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 RACK1P63244 317 aaKnown RBP11.12□□□□□ -0.63
CLTC-215ENST00000621829 RNASE10Q5GAN6 216 aaKnown RBP11.12□□□□□ -0.63
CLTC-215ENST00000621829 REEP3Q6NUK4 255 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 GPR135Q8IZ08 494 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 KDM8Q8N371 416 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 C16orf78Q8WTQ4 265 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 SIRPGQ9P1W8 387 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 A0A1W2PS29 197 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 LGALS2P05162 132 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 HTR1EP28566 365 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 PSMD8P48556 350 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 EMX2Q04743 252 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 COTL1Q14019 142 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 PDGFRLQ15198 375 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 OR10K2Q6IF99 312 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 RASGRP3Q8IV61 690 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 OR2A12Q8NGT7 310 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 TFAP2BQ92481 460 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 RSC1A1Q92681 617 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 ANKRD60Q9BZ19 345 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 DPP7Q9UHL4 492 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 SOBPA7XYQ1 873 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 HAS3O00219 553 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
CLTC-215ENST00000621829 L1CAMP32004 1257 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 CCKBRP32239 447 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 ADCYAP1R1P41586 468 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 ERVK-21P61565 698 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 RPS13P62277 151 aaKnown RBP11.12□□□□□ -0.63
CLTC-215ENST00000621829 INAVAQ3KP66 663 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 SIRPB2Q5JXA9 342 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 KBTBD6Q86V97 674 aa11.12□□□□□ -0.63
CLTC-215ENST00000621829 LINC00116Q8NCU8 138 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms