RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 WASH6PQ9NQA3 447 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 SERHLQ9NQF3 203 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 ASIC5Q9NY37 505 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 AP1M2Q9Y6Q5 423 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 MITFO75030 526 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-213ENST00000620219 LINGO3P0C6S8 592 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 BSGP35613 385 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 OR1D4P47884 311 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 PPP4R4Q6NUP7 873 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 EPHX4Q8IUS5 362 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 EID2Q8N6I1 236 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 OR2I1PQ8NGU4 316 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 C16orf58Q96GQ5 468 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 DGCR6LQ9BY27 220 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 TMEM45AQ9NWC5 275 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 EHD3Q9NZN3 535 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 C2orf16Q68DN1 1984 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 SCN8AQ9UQD0 1980 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 A0A1W2PR48 441 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 CTSVO60911 334 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 ZBTB11O95625 1053 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-213ENST00000620219 POLR2IP36954 125 aaKnown RBP14.87□□□□□ -0.03
CPSF1-213ENST00000620219 FIGNL1Q6PIW4 674 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 POMZP3Q6PJE2 187 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 SAMD14Q8IZD0 417 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-213ENST00000620219 CAMKK1Q8N5S9 505 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 HORMAD2Q8N7B1 307 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 TOR3AQ9H497 397 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 THUMPD1Q9NXG2 353 aaKnown RBP14.87□□□□□ -0.03
CPSF1-213ENST00000620219 SUSD2Q9UGT4 822 aa14.87□□□□□ -0.03
CPSF1-213ENST00000620219 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 A0A1W2PPV9 198 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 KCNK5O95279 499 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 FADDQ13158 208 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 NKG7Q16617 165 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ABI3BPQ7Z7G0 1075 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ANKFN1Q8N957 763 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 DGAT2Q96PD7 388 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 USP36Q9P275 1121 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 RPS6KB2Q9UBS0 482 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 CLCA3PQ9Y6N3 262 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 B4GAT1O43505 415 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 FRS3O43559 492 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 MYBPC1Q00872 1141 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 GPR19Q15760 415 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 SYPL1Q16563 259 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ZNF311Q5JNZ3 666 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 OR52E8Q6IFG1 317 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 C8orf82Q6P1X6 216 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 MSANTD1Q6ZTZ1 278 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 EIF3MQ7L2H7 374 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 PJA1Q8NG27 643 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 OR5K1Q8NHB7 308 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ZFP90Q8TF47 636 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ASB12Q8WXK4 309 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 RERGLQ9H628 205 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 PRTFDC1Q9NRG1 225 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 DCAF13Q9NV06 445 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 MS4A12Q9NXJ0 267 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 DHCR7Q9UBM7 475 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 SERTAD3Q9UJW9 196 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ABCG2Q9UNQ0 655 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 FAM20BO75063 409 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 PORP16435 677 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ELK4P28324 431 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 CAPGP40121 348 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 PLEKHM3Q6ZWE6 761 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 CLVS1Q8IUQ0 354 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 UBALD2Q8IYN6 164 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 NATD1Q8N6N6 113 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 GIPC3Q8TF64 312 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 GLIPR2Q9H4G4 154 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 POLR1BQ9H9Y6 1135 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 CLK4Q9HAZ1 481 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 NR4A1P22736 598 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 RPL5P46777 297 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 EXOSC7Q15024 291 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 PTRH1Q86Y79 214 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 PLXDC1Q8IUK5 500 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 C19orf47Q8N9M1 422 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 OR56A1Q8NGH5 318 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 EDAQ92838 391 aa14.86□□□□□ -0.03
CPSF1-213ENST00000620219 QRSL1Q9H0R6 528 aaKnown RBP14.86□□□□□ -0.03
CPSF1-213ENST00000620219 ADAMDEC1O15204 470 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 FHP07954 510 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 SPATS1Q496A3 300 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 NADK2Q4G0N4 442 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 CDC73Q6P1J9 531 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 UGT2A3Q6UWM9 527 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 ZZZ3Q8IYH5 903 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 LGI4Q8N135 537 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 ATXN7L1Q9ULK2 861 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-213ENST00000620219 WDR45Q9Y484 360 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 ALPK3Q96L96 1907 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 REV3LO60673 3130 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 ALPPP05187 535 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 PIGFQ07326 219 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 DGCR6Q14129 220 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 ZNF793Q6ZN11 406 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 CADM2Q8N3J6 435 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms